RNA–Protein interactions for RNA: ENST00000497232.5

CCDC142-209, Transcript of coiled-coil domain containing 142, humanhuman

TSL 3

Gene CCDC142, Length 671 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC142-209ENST00000497232 KXD1Q9BQD3 176 aa11.28□□□□□ -0.6
CCDC142-209ENST00000497232 SIK2Q9H0K1 926 aa11.28□□□□□ -0.6
CCDC142-209ENST00000497232 NOL6Q9H6R4 1146 aaKnown RBP11.28□□□□□ -0.6
CCDC142-209ENST00000497232 ARHGEF4Q9NR80 690 aa11.28□□□□□ -0.6
CCDC142-209ENST00000497232 NDFIP2Q9NV92 336 aa11.28□□□□□ -0.6
CCDC142-209ENST00000497232 SLC12A6Q9UHW9 1150 aa11.28□□□□□ -0.6
CCDC142-209ENST00000497232 FBXO10Q9UK96 956 aa11.28□□□□□ -0.6
CCDC142-209ENST00000497232 TTC7AQ9ULT0 858 aaPredicted RBP11.28□□□□□ -0.6
CCDC142-209ENST00000497232 SH3BP1Q9Y3L3 701 aa11.28□□□□□ -0.6
CCDC142-209ENST00000497232 NUMBLQ9Y6R0 609 aa11.28□□□□□ -0.6
CCDC142-209ENST00000497232 LRRD1A4D1F6 860 aa11.27□□□□□ -0.61
CCDC142-209ENST00000497232 CTAGE9A4FU28 777 aa11.27□□□□□ -0.61
CCDC142-209ENST00000497232 SHISA7A6NL88 538 aa11.27□□□□□ -0.61
CCDC142-209ENST00000497232 TRDMT1O14717 391 aaKnown RBP11.27□□□□□ -0.61
CCDC142-209ENST00000497232 ZNF185O15231 689 aa11.27□□□□□ -0.61
CCDC142-209ENST00000497232 CYP17A1P05093 508 aa11.27□□□□□ -0.61
CCDC142-209ENST00000497232 BMP1P13497 986 aa11.27□□□□□ -0.61
CCDC142-209ENST00000497232 KRT10P13645 584 aa11.27□□□□□ -0.61
CCDC142-209ENST00000497232 TNNT1P13805 278 aa11.27□□□□□ -0.61
CCDC142-209ENST00000497232 PSMC3P17980 439 aa11.27□□□□□ -0.61
CCDC142-209ENST00000497232 ERCC2P18074 760 aa11.27□□□□□ -0.61
CCDC142-209ENST00000497232 AMPD1P23109 780 aa11.27□□□□□ -0.61
CCDC142-209ENST00000497232 MSNP26038 577 aaKnown RBP11.27□□□□□ -0.61
CCDC142-209ENST00000497232 HOXD9P28356 352 aaPredicted RBP11.27□□□□□ -0.61
CCDC142-209ENST00000497232 CXCR5P32302 372 aa11.27□□□□□ -0.61
CCDC142-209ENST00000497232 GJC1P36383 396 aa11.27□□□□□ -0.61
CCDC142-209ENST00000497232 VCPP55072 806 aaKnown RBP11.27□□□□□ -0.61
CCDC142-209ENST00000497232 RPS24P62847 133 aaKnown RBP11.27□□□□□ -0.61
CCDC142-209ENST00000497232 SLC10A2Q12908 348 aaPredicted RBP11.27□□□□□ -0.61
CCDC142-209ENST00000497232 TFDP3Q5H9I0 405 aa11.27□□□□□ -0.61
CCDC142-209ENST00000497232 NCBP2-AS2Q69YL0 99 aa11.27□□□□□ -0.61
CCDC142-209ENST00000497232 TRIM68Q6AZZ1 485 aa11.27□□□□□ -0.61
CCDC142-209ENST00000497232 CXorf57Q6NSI4 855 aaKnown RBP11.27□□□□□ -0.61
CCDC142-209ENST00000497232 BBS12Q6ZW61 710 aa11.27□□□□□ -0.61
CCDC142-209ENST00000497232 MTSS1LQ765P7 747 aa11.27□□□□□ -0.61
CCDC142-209ENST00000497232 ETFBKMTQ8IXQ9 262 aa11.27□□□□□ -0.61
CCDC142-209ENST00000497232 LGI2Q8N0V4 545 aa11.27□□□□□ -0.61
CCDC142-209ENST00000497232 SLC44A3Q8N4M1 653 aa11.27□□□□□ -0.61
CCDC142-209ENST00000497232 NPWQ8N729 165 aa11.27□□□□□ -0.61
CCDC142-209ENST00000497232 KCTD6Q8NC69 237 aa11.27□□□□□ -0.61
CCDC142-209ENST00000497232 DEPDC1BQ8WUY9 529 aa11.27□□□□□ -0.61
CCDC142-209ENST00000497232 TBC1D31Q96DN5 1066 aa11.27□□□□□ -0.61
CCDC142-209ENST00000497232 RBM41Q96IZ5 413 aaKnown RBP11.27□□□□□ -0.61
CCDC142-209ENST00000497232 ZFYVE19Q96K21 471 aa11.27□□□□□ -0.61
CCDC142-209ENST00000497232 PSMB7Q99436 277 aa11.27□□□□□ -0.61
CCDC142-209ENST00000497232 RETREG1Q9H6L5 497 aa11.27□□□□□ -0.61
CCDC142-209ENST00000497232 TMEM248Q9NWD8 314 aa11.27□□□□□ -0.61
CCDC142-209ENST00000497232 MPP6Q9NZW5 540 aa11.27□□□□□ -0.61
CCDC142-209ENST00000497232 TBC1D14Q9P2M4 693 aa11.27□□□□□ -0.61
CCDC142-209ENST00000497232 LSM7Q9UK45 103 aaKnown RBP11.27□□□□□ -0.61
CCDC142-209ENST00000497232 VANGL2Q9ULK5 521 aa11.27□□□□□ -0.61
CCDC142-209ENST00000497232 CLEC4EQ9ULY5 219 aa11.27□□□□□ -0.61
CCDC142-209ENST00000497232 NR2E1Q9Y466 385 aa11.27□□□□□ -0.61
CCDC142-209ENST00000497232 OR51B4Q9Y5P0 310 aa11.27□□□□□ -0.61
CCDC142-209ENST00000497232 MYO10Q9HD67 2058 aa11.27□□□□□ -0.61
CCDC142-209ENST00000497232 TRIOO75962 3097 aa11.27□□□□□ -0.61
CCDC142-209ENST00000497232 KIF2AO00139 706 aaPredicted RBP11.26□□□□□ -0.61
CCDC142-209ENST00000497232 PDE2AO00408 941 aaPredicted RBP11.26□□□□□ -0.61
CCDC142-209ENST00000497232 KCNK3O14649 394 aa11.26□□□□□ -0.61
CCDC142-209ENST00000497232 CHADO15335 359 aa11.26□□□□□ -0.61
CCDC142-209ENST00000497232 HOXC11O43248 304 aaPredicted RBP11.26□□□□□ -0.61
CCDC142-209ENST00000497232 CISD3P0C7P0 127 aa11.26□□□□□ -0.61
CCDC142-209ENST00000497232 CHRM1P11229 460 aaPredicted RBP11.26□□□□□ -0.61
CCDC142-209ENST00000497232 ARSAP15289 507 aa11.26□□□□□ -0.61
CCDC142-209ENST00000497232 RHOQP17081 205 aa11.26□□□□□ -0.61
CCDC142-209ENST00000497232 SP100P23497 879 aaPredicted RBP11.26□□□□□ -0.61
CCDC142-209ENST00000497232 CHKAP35790 457 aa11.26□□□□□ -0.61
CCDC142-209ENST00000497232 ZP2Q05996 745 aa11.26□□□□□ -0.61
CCDC142-209ENST00000497232 TNK2Q07912 1038 aa11.26□□□□□ -0.61
CCDC142-209ENST00000497232 GRM2Q14416 872 aa11.26□□□□□ -0.61
CCDC142-209ENST00000497232 PAFAH1B3Q15102 231 aaKnown RBP11.26□□□□□ -0.61
CCDC142-209ENST00000497232 DHCR24Q15392 516 aa11.26□□□□□ -0.61
CCDC142-209ENST00000497232 PPP6R3Q5H9R7 873 aaPredicted RBP11.26□□□□□ -0.61
CCDC142-209ENST00000497232 LY6G5CQ5SRR4 150 aa11.26□□□□□ -0.61
CCDC142-209ENST00000497232 ASTLQ6HA08 431 aaPredicted RBP11.26□□□□□ -0.61
CCDC142-209ENST00000497232 KIAA0907Q7Z7F0 614 aaPredicted RBP11.26□□□□□ -0.61
CCDC142-209ENST00000497232 CHSY1Q86X52 802 aa11.26□□□□□ -0.61
CCDC142-209ENST00000497232 CIR1Q86X95 450 aaPredicted RBP11.26□□□□□ -0.61
CCDC142-209ENST00000497232 SLC13A5Q86YT5 568 aaPredicted RBP11.26□□□□□ -0.61
CCDC142-209ENST00000497232 ARHGAP12Q8IWW6 846 aa11.26□□□□□ -0.61
CCDC142-209ENST00000497232 TP53INP2Q8IXH6 220 aa11.26□□□□□ -0.61
CCDC142-209ENST00000497232 CFAP52Q8N1V2 620 aa11.26□□□□□ -0.61
CCDC142-209ENST00000497232 RTL3Q8N8U3 475 aaKnown RBP11.26□□□□□ -0.61
CCDC142-209ENST00000497232 TDRD5Q8NAT2 981 aaKnown RBP11.26□□□□□ -0.61
CCDC142-209ENST00000497232 WFDC5Q8TCV5 224 aa11.26□□□□□ -0.61
CCDC142-209ENST00000497232 ACTRT1Q8TDG2 376 aa11.26□□□□□ -0.61
CCDC142-209ENST00000497232 IRF7Q92985 503 aa11.26□□□□□ -0.61
CCDC142-209ENST00000497232 NXPE3Q969Y0 559 aa11.26□□□□□ -0.61
CCDC142-209ENST00000497232 ALG14Q96F25 216 aa11.26□□□□□ -0.61
CCDC142-209ENST00000497232 MS4A14Q96JA4 679 aa11.26□□□□□ -0.61
CCDC142-209ENST00000497232 PBKQ96KB5 322 aa11.26□□□□□ -0.61
CCDC142-209ENST00000497232 OSBPL8Q9BZF1 889 aa11.26□□□□□ -0.61
CCDC142-209ENST00000497232 LRRC19Q9H756 370 aa11.26□□□□□ -0.61
CCDC142-209ENST00000497232 KCNK12Q9HB15 430 aa11.26□□□□□ -0.61
CCDC142-209ENST00000497232 SPHK2Q9NRA0 654 aa11.26□□□□□ -0.61
CCDC142-209ENST00000497232 DUS2Q9NX74 493 aaKnown RBP11.26□□□□□ -0.61
CCDC142-209ENST00000497232 SMARCAL1Q9NZC9 954 aa11.26□□□□□ -0.61
CCDC142-209ENST00000497232 THEGQ9P2T0 379 aa11.26□□□□□ -0.61
CCDC142-209ENST00000497232 TBC1D30Q9Y2I9 924 aa11.26□□□□□ -0.61
CCDC142-209ENST00000497232 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms