RNA–Protein interactions for RNA: ENST00000497210.5

CTPS1-211, Transcript of CTP synthase 1, humanhuman

TSL 3

Gene CTPS1, Length 463 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1-211ENST00000497210 TMC8Q8IU68 726 aa10.09□□□□□ -0.79
CTPS1-211ENST00000497210 CCNJLQ8IV13 435 aa10.09□□□□□ -0.79
CTPS1-211ENST00000497210 RHOT1Q8IXI2 618 aa10.09□□□□□ -0.79
CTPS1-211ENST00000497210 MICALL1Q8N3F8 863 aa10.09□□□□□ -0.79
CTPS1-211ENST00000497210 C17orf53Q8N3J3 647 aaPredicted RBP10.09□□□□□ -0.79
CTPS1-211ENST00000497210 LRRC57Q8N9N7 239 aa10.09□□□□□ -0.79
CTPS1-211ENST00000497210 ELOA3Q8NG57 546 aa10.09□□□□□ -0.79
CTPS1-211ENST00000497210 DQX1Q8TE96 717 aaKnown RBP10.09□□□□□ -0.79
CTPS1-211ENST00000497210 ATRIPQ8WXE1 791 aa10.09□□□□□ -0.79
CTPS1-211ENST00000497210 ACDQ96AP0 544 aa10.09□□□□□ -0.79
CTPS1-211ENST00000497210 BTBD6Q96KE9 485 aa10.09□□□□□ -0.79
CTPS1-211ENST00000497210 RIPOR3Q96MK2 946 aa10.09□□□□□ -0.79
CTPS1-211ENST00000497210 HHIPQ96QV1 700 aa10.09□□□□□ -0.79
CTPS1-211ENST00000497210 NAPGQ99747 312 aaPredicted RBP10.09□□□□□ -0.79
CTPS1-211ENST00000497210 RASSF4Q9H2L5 321 aa10.09□□□□□ -0.79
CTPS1-211ENST00000497210 TRPC7Q9HCX4 862 aa10.09□□□□□ -0.79
CTPS1-211ENST00000497210 FAM8A1Q9UBU6 413 aa10.09□□□□□ -0.79
CTPS1-211ENST00000497210 RASAL2Q9UJF2 1139 aa10.09□□□□□ -0.79
CTPS1-211ENST00000497210 HBS1LQ9Y450 684 aaKnown RBP10.09□□□□□ -0.79
CTPS1-211ENST00000497210 MTCH2Q9Y6C9 303 aa10.09□□□□□ -0.79
CTPS1-211ENST00000497210 IRAK2O43187 625 aa10.08□□□□□ -0.8
CTPS1-211ENST00000497210 LRCH4O75427 683 aa10.08□□□□□ -0.8
CTPS1-211ENST00000497210 TRUB2O95900 331 aaKnown RBP10.08□□□□□ -0.8
CTPS1-211ENST00000497210 FTCDO95954 541 aa10.08□□□□□ -0.8
CTPS1-211ENST00000497210 GHRHP01286 108 aa10.08□□□□□ -0.8
CTPS1-211ENST00000497210 CKMP06732 381 aa10.08□□□□□ -0.8
CTPS1-211ENST00000497210 COMTP21964 271 aa10.08□□□□□ -0.8
CTPS1-211ENST00000497210 CASQ1P31415 396 aa10.08□□□□□ -0.8
CTPS1-211ENST00000497210 CCR1P32246 355 aa10.08□□□□□ -0.8
CTPS1-211ENST00000497210 CTNNA1P35221 906 aaKnown RBP10.08□□□□□ -0.8
CTPS1-211ENST00000497210 ATP5C1P36542 298 aaKnown RBP10.08□□□□□ -0.8
CTPS1-211ENST00000497210 CETN2P41208 172 aa10.08□□□□□ -0.8
CTPS1-211ENST00000497210 ZNF252P-AS1Q0IIN9 211 aa10.08□□□□□ -0.8
CTPS1-211ENST00000497210 NME3Q13232 169 aa10.08□□□□□ -0.8
CTPS1-211ENST00000497210 KCNC3Q14003 757 aa10.08□□□□□ -0.8
CTPS1-211ENST00000497210 TAF5Q15542 800 aa10.08□□□□□ -0.8
CTPS1-211ENST00000497210 CLUL1Q15846 466 aa10.08□□□□□ -0.8
CTPS1-211ENST00000497210 CCDC14Q49A88 953 aa10.08□□□□□ -0.8
CTPS1-211ENST00000497210 BRMS1LQ5PSV4 323 aa10.08□□□□□ -0.8
CTPS1-211ENST00000497210 DNTTIP2Q5QJE6 756 aaKnown RBP10.08□□□□□ -0.8
CTPS1-211ENST00000497210 RARS2Q5T160 578 aaKnown RBP10.08□□□□□ -0.8
CTPS1-211ENST00000497210 LRRC38Q5VT99 294 aa10.08□□□□□ -0.8
CTPS1-211ENST00000497210 ANKRD54Q6NXT1 300 aa10.08□□□□□ -0.8
CTPS1-211ENST00000497210 TMC5Q6UXY8 1006 aa10.08□□□□□ -0.8
CTPS1-211ENST00000497210 SLFN11Q7Z7L1 901 aa10.08□□□□□ -0.8
CTPS1-211ENST00000497210 SCD5Q86SK9 330 aa10.08□□□□□ -0.8
CTPS1-211ENST00000497210 DDX42Q86XP3 938 aaKnown RBP eCLIP10.08□□□□□ -0.8
CTPS1-211ENST00000497210 PSTKQ8IV42 348 aaKnown RBP10.08□□□□□ -0.8
CTPS1-211ENST00000497210 SLC35F6Q8N357 371 aa10.08□□□□□ -0.8
CTPS1-211ENST00000497210 VN1R2Q8NFZ6 395 aa10.08□□□□□ -0.8
CTPS1-211ENST00000497210 TEKT4Q8WW24 435 aa10.08□□□□□ -0.8
CTPS1-211ENST00000497210 NDRG1Q92597 394 aaKnown RBP10.08□□□□□ -0.8
CTPS1-211ENST00000497210 RNF34Q969K3 372 aa10.08□□□□□ -0.8
CTPS1-211ENST00000497210 NT5C3BQ969T7 300 aa10.08□□□□□ -0.8
CTPS1-211ENST00000497210 PLD4Q96BZ4 506 aa10.08□□□□□ -0.8
CTPS1-211ENST00000497210 PABPC5Q96DU9 382 aaKnown RBP10.08□□□□□ -0.8
CTPS1-211ENST00000497210 CRELD1Q96HD1 420 aa10.08□□□□□ -0.8
CTPS1-211ENST00000497210 RBM41Q96IZ5 413 aaKnown RBP10.08□□□□□ -0.8
CTPS1-211ENST00000497210 NPY6RQ99463 290 aa10.08□□□□□ -0.8
CTPS1-211ENST00000497210 TRIM7Q9C029 511 aa10.08□□□□□ -0.8
CTPS1-211ENST00000497210 BHLHE41Q9C0J9 482 aaPredicted RBP10.08□□□□□ -0.8
CTPS1-211ENST00000497210 ATXN3LQ9H3M9 355 aa10.08□□□□□ -0.8
CTPS1-211ENST00000497210 SLITRK6Q9H5Y7 841 aa10.08□□□□□ -0.8
CTPS1-211ENST00000497210 LIN7BQ9HAP6 207 aa10.08□□□□□ -0.8
CTPS1-211ENST00000497210 ZNF334Q9HCZ1 680 aaPredicted RBP10.08□□□□□ -0.8
CTPS1-211ENST00000497210 CLDND1Q9NY35 253 aa10.08□□□□□ -0.8
CTPS1-211ENST00000497210 DDX56Q9NY93 547 aaKnown RBP10.08□□□□□ -0.8
CTPS1-211ENST00000497210 MARCH2Q9P0N8 246 aa10.08□□□□□ -0.8
CTPS1-211ENST00000497210 SLC12A6Q9UHW9 1150 aa10.08□□□□□ -0.8
CTPS1-211ENST00000497210 NAALADL1Q9UQQ1 740 aa10.08□□□□□ -0.8
CTPS1-211ENST00000497210 TLR6Q9Y2C9 796 aa10.08□□□□□ -0.8
CTPS1-211ENST00000497210 HELZP42694 1942 aaKnown RBP10.07□□□□□ -0.8
CTPS1-211ENST00000497210 NUP210Q8TEM1 1887 aaPredicted RBP10.07□□□□□ -0.8
CTPS1-211ENST00000497210 SYNJ2BP-COX16A0A087WUM0 186 aa10.07□□□□□ -0.8
CTPS1-211ENST00000497210 SOX1O00570 391 aaPredicted RBP10.07□□□□□ -0.8
CTPS1-211ENST00000497210 MDM4O15151 490 aa10.07□□□□□ -0.8
CTPS1-211ENST00000497210 TADA3O75528 432 aa10.07□□□□□ -0.8
CTPS1-211ENST00000497210 GLP2RO95838 553 aa10.07□□□□□ -0.8
CTPS1-211ENST00000497210 OAS1P00973 400 aaKnown RBP10.07□□□□□ -0.8
CTPS1-211ENST00000497210 IGLV3-25P01717 112 aa10.07□□□□□ -0.8
CTPS1-211ENST00000497210 MBL2P11226 248 aaPredicted RBP10.07□□□□□ -0.8
CTPS1-211ENST00000497210 EPXP11678 715 aa10.07□□□□□ -0.8
CTPS1-211ENST00000497210 TNNT1P13805 278 aa10.07□□□□□ -0.8
CTPS1-211ENST00000497210 FOSL2P15408 326 aa10.07□□□□□ -0.8
CTPS1-211ENST00000497210 TCP1P17987 556 aaKnown RBP10.07□□□□□ -0.8
CTPS1-211ENST00000497210 CTNNA2P26232 953 aa10.07□□□□□ -0.8
CTPS1-211ENST00000497210 GJC1P36383 396 aa10.07□□□□□ -0.8
CTPS1-211ENST00000497210 AVPR1AP37288 418 aa10.07□□□□□ -0.8
CTPS1-211ENST00000497210 MTHFRP42898 656 aa10.07□□□□□ -0.8
CTPS1-211ENST00000497210 ZNF135P52742 658 aaPredicted RBP10.07□□□□□ -0.8
CTPS1-211ENST00000497210 COG7P83436 770 aa10.07□□□□□ -0.8
CTPS1-211ENST00000497210 OGDHQ02218 1023 aa10.07□□□□□ -0.8
CTPS1-211ENST00000497210 RING1Q06587 406 aa10.07□□□□□ -0.8
CTPS1-211ENST00000497210 EFEMP1Q12805 493 aa10.07□□□□□ -0.8
CTPS1-211ENST00000497210 PPP2R5DQ14738 602 aa10.07□□□□□ -0.8
CTPS1-211ENST00000497210 RPS6KA1Q15418 735 aa10.07□□□□□ -0.8
CTPS1-211ENST00000497210 C15orf59Q2T9L4 293 aaPredicted RBP10.07□□□□□ -0.8
CTPS1-211ENST00000497210 PERM1Q5SV97 790 aa10.07□□□□□ -0.8
CTPS1-211ENST00000497210 SEL1L2Q5TEA6 688 aa10.07□□□□□ -0.8
CTPS1-211ENST00000497210 CC2D1AQ6P1N0 951 aaPredicted RBP10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms