RNA–Protein interactions for RNA: ENST00000496738.5

LMNA-216, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-216ENST00000496738 ARTNQ5T4W7 220 aa17.4■□□□□ 0.38
LMNA-216ENST00000496738 MAB21L3Q8N8X9 362 aa17.4■□□□□ 0.38
LMNA-216ENST00000496738 CCDC89Q8N998 374 aa17.4■□□□□ 0.38
LMNA-216ENST00000496738 ASAH2Q9NR71 780 aa17.4■□□□□ 0.38
LMNA-216ENST00000496738 HBS1LQ9Y450 684 aaKnown RBP17.4■□□□□ 0.38
LMNA-216ENST00000496738 HCFC2Q9Y5Z7 792 aa17.4■□□□□ 0.38
LMNA-216ENST00000496738 CCR2P41597 374 aa17.39■□□□□ 0.37
LMNA-216ENST00000496738 PPP3CCP48454 512 aa17.39■□□□□ 0.37
LMNA-216ENST00000496738 RING1Q06587 406 aa17.39■□□□□ 0.37
LMNA-216ENST00000496738 AUHQ13825 339 aaKnown RBP17.39■□□□□ 0.37
LMNA-216ENST00000496738 PAFAH1B3Q15102 231 aaKnown RBP17.39■□□□□ 0.37
LMNA-216ENST00000496738 P3H1Q32P28 736 aa17.39■□□□□ 0.37
LMNA-216ENST00000496738 PABPC1LQ4VXU2 614 aaKnown RBP17.39■□□□□ 0.37
LMNA-216ENST00000496738 BEND6Q5SZJ8 279 aaPredicted RBP17.39■□□□□ 0.37
LMNA-216ENST00000496738 MANEALQ5VSG8 457 aa17.39■□□□□ 0.37
LMNA-216ENST00000496738 NADSYN1Q6IA69 706 aa17.39■□□□□ 0.37
LMNA-216ENST00000496738 SYDE1Q6ZW31 735 aaPredicted RBP17.39■□□□□ 0.37
LMNA-216ENST00000496738 CHSY1Q86X52 802 aa17.39■□□□□ 0.37
LMNA-216ENST00000496738 DENND1CQ8IV53 801 aa17.39■□□□□ 0.37
LMNA-216ENST00000496738 AENQ8WTP8 325 aaKnown RBP17.39■□□□□ 0.37
LMNA-216ENST00000496738 MYEOVQ96EZ4 313 aa17.39■□□□□ 0.37
LMNA-216ENST00000496738 ATG2AQ2TAZ0 1938 aa17.39■□□□□ 0.37
LMNA-216ENST00000496738 CDH23Q9H251 3354 aa17.39■□□□□ 0.37
LMNA-216ENST00000496738 NRIP1P48552 1158 aa17.39■□□□□ 0.37
LMNA-216ENST00000496738 NR2C2P49116 596 aa17.39■□□□□ 0.37
LMNA-216ENST00000496738 KPNA1P52294 538 aaPredicted RBP17.39■□□□□ 0.37
LMNA-216ENST00000496738 GPS1Q13098 491 aa17.39■□□□□ 0.37
LMNA-216ENST00000496738 NUGGCQ68CJ6 796 aa17.39■□□□□ 0.37
LMNA-216ENST00000496738 KLHDC10Q6PID8 442 aa17.39■□□□□ 0.37
LMNA-216ENST00000496738 ZDHHC24Q6UX98 284 aa17.39■□□□□ 0.37
LMNA-216ENST00000496738 TFAP2DQ7Z6R9 452 aa17.39■□□□□ 0.37
LMNA-216ENST00000496738 CIR1Q86X95 450 aaPredicted RBP17.39■□□□□ 0.37
LMNA-216ENST00000496738 ZNF276Q8N554 614 aa17.39■□□□□ 0.37
LMNA-216ENST00000496738 CCNYQ8ND76 341 aa17.39■□□□□ 0.37
LMNA-216ENST00000496738 DEPDC1BQ8WUY9 529 aa17.39■□□□□ 0.37
LMNA-216ENST00000496738 MRPS31Q92665 395 aaKnown RBP17.39■□□□□ 0.37
LMNA-216ENST00000496738 NDFIP2Q9NV92 336 aa17.39■□□□□ 0.37
LMNA-216ENST00000496738 STC2O76061 302 aa17.38■□□□□ 0.37
LMNA-216ENST00000496738 HDCP19113 662 aa17.38■□□□□ 0.37
LMNA-216ENST00000496738 CORO1AP31146 461 aaKnown RBP17.38■□□□□ 0.37
LMNA-216ENST00000496738 NTHL1P78549 312 aa17.38■□□□□ 0.37
LMNA-216ENST00000496738 MAP9Q49MG5 647 aa17.38■□□□□ 0.37
LMNA-216ENST00000496738 FBXL22Q6P050 247 aa17.38■□□□□ 0.37
LMNA-216ENST00000496738 RFWD3Q6PCD5 774 aa17.38■□□□□ 0.37
LMNA-216ENST00000496738 FBXO25Q8TCJ0 367 aa17.38■□□□□ 0.37
LMNA-216ENST00000496738 HNRNPLLQ8WVV9 542 aaKnown RBP17.38■□□□□ 0.37
LMNA-216ENST00000496738 IGSF8Q969P0 613 aa17.38■□□□□ 0.37
LMNA-216ENST00000496738 TCEAL4Q96EI5 215 aa17.38■□□□□ 0.37
LMNA-216ENST00000496738 SNF8Q96H20 258 aa17.38■□□□□ 0.37
LMNA-216ENST00000496738 OLFM3Q96PB7 478 aa17.38■□□□□ 0.37
LMNA-216ENST00000496738 KLF16Q9BXK1 252 aaPredicted RBP17.38■□□□□ 0.37
LMNA-216ENST00000496738 DNMT3BQ9UBC3 853 aaKnown RBP17.38■□□□□ 0.37
LMNA-216ENST00000496738 SUFUQ9UMX1 484 aa17.38■□□□□ 0.37
LMNA-216ENST00000496738 MTCL1Q9Y4B5 1905 aaKnown RBP17.38■□□□□ 0.37
LMNA-216ENST00000496738 TRDMT1O14717 391 aaKnown RBP17.38■□□□□ 0.37
LMNA-216ENST00000496738 CNTN5O94779 1100 aa17.38■□□□□ 0.37
LMNA-216ENST00000496738 KLKB1P03952 638 aa17.38■□□□□ 0.37
LMNA-216ENST00000496738 VAV1P15498 845 aa17.38■□□□□ 0.37
LMNA-216ENST00000496738 IVDP26440 423 aa17.38■□□□□ 0.37
LMNA-216ENST00000496738 HARS2P49590 506 aaKnown RBP17.38■□□□□ 0.37
LMNA-216ENST00000496738 COG7P83436 770 aa17.38■□□□□ 0.37
LMNA-216ENST00000496738 AP1B1Q10567 949 aa17.38■□□□□ 0.37
LMNA-216ENST00000496738 SLC45A4Q5BKX6 768 aa17.38■□□□□ 0.37
LMNA-216ENST00000496738 CDKL3Q8IVW4 592 aaPredicted RBP17.38■□□□□ 0.37
LMNA-216ENST00000496738 C10orf67Q8IYJ2 551 aa17.38■□□□□ 0.37
LMNA-216ENST00000496738 C1orf74Q96LT6 269 aa17.38■□□□□ 0.37
LMNA-216ENST00000496738 QKIQ96PU8 341 aaKnown RBP eCLIP17.38■□□□□ 0.37
LMNA-216ENST00000496738 GCNAQ96QF7 691 aa17.38■□□□□ 0.37
LMNA-216ENST00000496738 SMG9Q9H0W8 520 aaKnown RBP17.38■□□□□ 0.37
LMNA-216ENST00000496738 TLE6Q9H808 572 aa17.38■□□□□ 0.37
LMNA-216ENST00000496738 USP29Q9HBJ7 922 aa17.38■□□□□ 0.37
LMNA-216ENST00000496738 CKMP06732 381 aa17.37■□□□□ 0.37
LMNA-216ENST00000496738 SLC6A4P31645 630 aa17.37■□□□□ 0.37
LMNA-216ENST00000496738 RPL22P35268 128 aaKnown RBP17.37■□□□□ 0.37
LMNA-216ENST00000496738 ZNF135P52742 658 aaPredicted RBP17.37■□□□□ 0.37
LMNA-216ENST00000496738 ZXDBP98169 803 aa17.37■□□□□ 0.37
LMNA-216ENST00000496738 CALCOCO2Q13137 446 aa17.37■□□□□ 0.37
LMNA-216ENST00000496738 ALFQ53S48 1182 aa17.37■□□□□ 0.37
LMNA-216ENST00000496738 IZUMO3Q5VZ72 239 aa17.37■□□□□ 0.37
LMNA-216ENST00000496738 PDE12Q6L8Q7 609 aaKnown RBP17.37■□□□□ 0.37
LMNA-216ENST00000496738 ZNF683Q8IZ20 524 aa17.37■□□□□ 0.37
LMNA-216ENST00000496738 C12orf76Q8N812 135 aaPredicted RBP17.37■□□□□ 0.37
LMNA-216ENST00000496738 ZFRQ96KR1 1074 aaKnown RBP17.37■□□□□ 0.37
LMNA-216ENST00000496738 RPRD1AQ96P16 312 aaPredicted RBP17.37■□□□□ 0.37
LMNA-216ENST00000496738 CEP41Q9BYV8 373 aa17.37■□□□□ 0.37
LMNA-216ENST00000496738 PRDM12Q9H4Q4 367 aa17.37■□□□□ 0.37
LMNA-216ENST00000496738 PCDH9Q9HC56 1237 aa17.37■□□□□ 0.37
LMNA-216ENST00000496738 ZDHHC18Q9NUE0 388 aa17.37■□□□□ 0.37
LMNA-216ENST00000496738 SEPT10Q9P0V9 454 aa17.37■□□□□ 0.37
LMNA-216ENST00000496738 CPQQ9Y646 472 aa17.37■□□□□ 0.37
LMNA-216ENST00000496738 TACR2P21452 398 aa17.37■□□□□ 0.37
LMNA-216ENST00000496738 NUMBP49757 651 aa17.37■□□□□ 0.37
LMNA-216ENST00000496738 ITGA8P53708 1063 aa17.37■□□□□ 0.37
LMNA-216ENST00000496738 SMAD3P84022 425 aaKnown RBP17.37■□□□□ 0.37
LMNA-216ENST00000496738 DNAJC21Q5F1R6 531 aaKnown RBP17.37■□□□□ 0.37
LMNA-216ENST00000496738 LRRC31Q6UY01 552 aa17.37■□□□□ 0.37
LMNA-216ENST00000496738 TDHQ8IZJ6 230 aa17.37■□□□□ 0.37
LMNA-216ENST00000496738 LGI2Q8N0V4 545 aa17.37■□□□□ 0.37
LMNA-216ENST00000496738 CFAP52Q8N1V2 620 aa17.37■□□□□ 0.37
LMNA-216ENST00000496738 TFB1MQ8WVM0 346 aaKnown RBP17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 93 ms