RNA–Protein interactions for RNA: ENST00000496622.1

SSBP1-213, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 2,620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-213ENST00000496622 METTL5Q9NRN9 209 aaKnown RBP6.38□□□□□ -1.39
SSBP1-213ENST00000496622 DNAJC17Q9NVM6 304 aaKnown RBP6.38□□□□□ -1.39
SSBP1-213ENST00000496622 PIH1D1Q9NWS0 290 aaKnown RBP6.38□□□□□ -1.39
SSBP1-213ENST00000496622 VPS18Q9P253 973 aa6.38□□□□□ -1.39
SSBP1-213ENST00000496622 LRFN2Q9ULH4 789 aa6.38□□□□□ -1.39
SSBP1-213ENST00000496622 PADI3Q9ULW8 664 aa6.38□□□□□ -1.39
SSBP1-213ENST00000496622 SH3GLB1Q9Y371 365 aa6.38□□□□□ -1.39
SSBP1-213ENST00000496622 SNX5Q9Y5X3 404 aa6.38□□□□□ -1.39
SSBP1-213ENST00000496622 GIMAP1-GIMAP5A0A087WTJ2 511 aa6.37□□□□□ -1.39
SSBP1-213ENST00000496622 TMEM191CA6NGB0 347 aa6.37□□□□□ -1.39
SSBP1-213ENST00000496622 KPNA7A9QM74 516 aa6.37□□□□□ -1.39
SSBP1-213ENST00000496622 AGPSO00116 658 aa6.37□□□□□ -1.39
SSBP1-213ENST00000496622 BEST1O76090 585 aa6.37□□□□□ -1.39
SSBP1-213ENST00000496622 PFKMP08237 780 aa6.37□□□□□ -1.39
SSBP1-213ENST00000496622 KRT3P12035 628 aa6.37□□□□□ -1.39
SSBP1-213ENST00000496622 NR2C2P49116 596 aa6.37□□□□□ -1.39
SSBP1-213ENST00000496622 SCNN1GP51170 649 aa6.37□□□□□ -1.39
SSBP1-213ENST00000496622 CLCNKBP51801 687 aa6.37□□□□□ -1.39
SSBP1-213ENST00000496622 TEAD4Q15561 434 aa6.37□□□□□ -1.39
SSBP1-213ENST00000496622 EFHC2Q5JST6 749 aa6.37□□□□□ -1.39
SSBP1-213ENST00000496622 FBXO47Q5MNV8 452 aa6.37□□□□□ -1.39
SSBP1-213ENST00000496622 DNAJC24Q6P3W2 148 aa6.37□□□□□ -1.39
SSBP1-213ENST00000496622 BEND5Q7L4P6 421 aa6.37□□□□□ -1.39
SSBP1-213ENST00000496622 HDXQ7Z353 690 aa6.37□□□□□ -1.39
SSBP1-213ENST00000496622 ZNF677Q86XU0 584 aa6.37□□□□□ -1.39
SSBP1-213ENST00000496622 PHF13Q86YI8 300 aaPredicted RBP6.37□□□□□ -1.39
SSBP1-213ENST00000496622 SLC13A5Q86YT5 568 aaPredicted RBP6.37□□□□□ -1.39
SSBP1-213ENST00000496622 AADATQ8N5Z0 425 aa6.37□□□□□ -1.39
SSBP1-213ENST00000496622 UBL4BQ8N7F7 174 aa6.37□□□□□ -1.39
SSBP1-213ENST00000496622 SPERTQ8NA61 448 aa6.37□□□□□ -1.39
SSBP1-213ENST00000496622 GLIS1Q8NBF1 620 aa6.37□□□□□ -1.39
SSBP1-213ENST00000496622 NETO2Q8NC67 525 aa6.37□□□□□ -1.39
SSBP1-213ENST00000496622 GOT1L1Q8NHS2 421 aaPredicted RBP6.37□□□□□ -1.39
SSBP1-213ENST00000496622 ZNF296Q8WUU4 475 aaPredicted RBP6.37□□□□□ -1.39
SSBP1-213ENST00000496622 HNRNPLLQ8WVV9 542 aaKnown RBP6.37□□□□□ -1.39
SSBP1-213ENST00000496622 KBTBD7Q8WVZ9 684 aa6.37□□□□□ -1.39
SSBP1-213ENST00000496622 DYDC1Q8WWB3 177 aa6.37□□□□□ -1.39
SSBP1-213ENST00000496622 GIMAP5Q96F15 307 aa6.37□□□□□ -1.39
SSBP1-213ENST00000496622 TBCBQ99426 244 aa6.37□□□□□ -1.39
SSBP1-213ENST00000496622 RHOBTB2Q9BYZ6 727 aa6.37□□□□□ -1.39
SSBP1-213ENST00000496622 CCSER2Q9H7U1 834 aa6.37□□□□□ -1.39
SSBP1-213ENST00000496622 CLK4Q9HAZ1 481 aaKnown RBP6.37□□□□□ -1.39
SSBP1-213ENST00000496622 PARVAQ9NVD7 372 aa6.37□□□□□ -1.39
SSBP1-213ENST00000496622 MAGED1Q9Y5V3 778 aaPredicted RBP6.37□□□□□ -1.39
SSBP1-213ENST00000496622 MRPL42Q9Y6G3 142 aaKnown RBP6.37□□□□□ -1.39
SSBP1-213ENST00000496622 TRIP11Q15643 1979 aa6.37□□□□□ -1.39
SSBP1-213ENST00000496622 TCRBV5S1A1TA0A578 114 aa6.37□□□□□ -1.39
SSBP1-213ENST00000496622 KHNYNO15037 678 aaKnown RBP6.37□□□□□ -1.39
SSBP1-213ENST00000496622 PROSCO94903 275 aa6.37□□□□□ -1.39
SSBP1-213ENST00000496622 PENKP01210 267 aaPredicted RBP6.37□□□□□ -1.39
SSBP1-213ENST00000496622 ITGB1P05556 798 aa6.37□□□□□ -1.39
SSBP1-213ENST00000496622 HNRNPCP07910 306 aaKnown RBP eCLIP6.37□□□□□ -1.39
SSBP1-213ENST00000496622 HOXC8P31273 242 aa6.37□□□□□ -1.39
SSBP1-213ENST00000496622 ADCY8P40145 1251 aa6.37□□□□□ -1.39
SSBP1-213ENST00000496622 CETN2P41208 172 aa6.37□□□□□ -1.39
SSBP1-213ENST00000496622 PLTPP55058 493 aa6.37□□□□□ -1.39
SSBP1-213ENST00000496622 HADHBP55084 474 aaKnown RBP6.37□□□□□ -1.39
SSBP1-213ENST00000496622 GEMIN4P57678 1058 aaKnown RBP6.37□□□□□ -1.39
SSBP1-213ENST00000496622 LILRA4P59901 499 aa6.37□□□□□ -1.39
SSBP1-213ENST00000496622 MRPS6P82932 125 aaKnown RBP6.37□□□□□ -1.39
SSBP1-213ENST00000496622 CD83Q01151 205 aa6.37□□□□□ -1.39
SSBP1-213ENST00000496622 DR1Q01658 176 aa6.37□□□□□ -1.39
SSBP1-213ENST00000496622 ENPEPQ07075 957 aa6.37□□□□□ -1.39
SSBP1-213ENST00000496622 KLC1Q07866 573 aa6.37□□□□□ -1.39
SSBP1-213ENST00000496622 MYO1EQ12965 1108 aa6.37□□□□□ -1.39
SSBP1-213ENST00000496622 PDCLQ13371 301 aa6.37□□□□□ -1.39
SSBP1-213ENST00000496622 SIX1Q15475 284 aaPredicted RBP6.37□□□□□ -1.39
SSBP1-213ENST00000496622 IGSF11Q5DX21 431 aa6.37□□□□□ -1.39
SSBP1-213ENST00000496622 LIN9Q5TKA1 542 aa6.37□□□□□ -1.39
SSBP1-213ENST00000496622 KIAA0319Q5VV43 1072 aa6.37□□□□□ -1.39
SSBP1-213ENST00000496622 WSCD1Q658N2 575 aa6.37□□□□□ -1.39
SSBP1-213ENST00000496622 KCTD16Q68DU8 428 aa6.37□□□□□ -1.39
SSBP1-213ENST00000496622 NEPROQ6NW34 567 aa6.37□□□□□ -1.39
SSBP1-213ENST00000496622 CCDC137Q6PK04 289 aaKnown RBP6.37□□□□□ -1.39
SSBP1-213ENST00000496622 MFSD7Q6UXD7 560 aa6.37□□□□□ -1.39
SSBP1-213ENST00000496622 AGMOQ6ZNB7 445 aa6.37□□□□□ -1.39
SSBP1-213ENST00000496622 CEP68Q76N32 757 aa6.37□□□□□ -1.39
SSBP1-213ENST00000496622 SERINC5Q86VE9 423 aa6.37□□□□□ -1.39
SSBP1-213ENST00000496622 EXOC3L1Q86VI1 746 aa6.37□□□□□ -1.39
SSBP1-213ENST00000496622 CCDC105Q8IYK2 499 aa6.37□□□□□ -1.39
SSBP1-213ENST00000496622 STKLD1Q8NE28 680 aa6.37□□□□□ -1.39
SSBP1-213ENST00000496622 AENQ8WTP8 325 aaKnown RBP6.37□□□□□ -1.39
SSBP1-213ENST00000496622 CFAP57Q96MR6 1250 aa6.37□□□□□ -1.39
SSBP1-213ENST00000496622 KATNAL1Q9BW62 490 aa6.37□□□□□ -1.39
SSBP1-213ENST00000496622 NT5C1AQ9BXI3 368 aa6.37□□□□□ -1.39
SSBP1-213ENST00000496622 CRISPLD1Q9H336 500 aa6.37□□□□□ -1.39
SSBP1-213ENST00000496622 CENPHQ9H3R5 247 aa6.37□□□□□ -1.39
SSBP1-213ENST00000496622 FAM105AQ9NUU6 356 aa6.37□□□□□ -1.39
SSBP1-213ENST00000496622 RNF14Q9UBS8 474 aa6.37□□□□□ -1.39
SSBP1-213ENST00000496622 SRRDQ9UH36 339 aa6.37□□□□□ -1.39
SSBP1-213ENST00000496622 ITGA11Q9UKX5 1188 aa6.37□□□□□ -1.39
SSBP1-213ENST00000496622 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.36□□□□□ -1.39
SSBP1-213ENST00000496622 ZW10O43264 779 aa6.36□□□□□ -1.39
SSBP1-213ENST00000496622 XPOTO43592 962 aaKnown RBP6.36□□□□□ -1.39
SSBP1-213ENST00000496622 ZSCAN5DPP0CG00 497 aa6.36□□□□□ -1.39
SSBP1-213ENST00000496622 ETS1P14921 441 aa6.36□□□□□ -1.39
SSBP1-213ENST00000496622 TKTP29401 623 aaKnown RBP6.36□□□□□ -1.39
SSBP1-213ENST00000496622 HSD17B2P37059 387 aa6.36□□□□□ -1.39
SSBP1-213ENST00000496622 HAAOP46952 286 aa6.36□□□□□ -1.39
SSBP1-213ENST00000496622 B2MP61769 119 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms