RNA–Protein interactions for RNA: ENST00000496549.5

CRNKL1-205, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best)

Gene CRNKL1, Length 4,093 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-205ENST00000496549 PJA1Q8NG27 643 aa8.37□□□□□ -1.07
CRNKL1-205ENST00000496549 RORBQ92753 470 aa8.37□□□□□ -1.07
CRNKL1-205ENST00000496549 DPF3Q92784 378 aa8.37□□□□□ -1.07
CRNKL1-205ENST00000496549 SNX18Q96RF0 628 aa8.37□□□□□ -1.07
CRNKL1-205ENST00000496549 ACSS3Q9H6R3 686 aa8.37□□□□□ -1.07
CRNKL1-205ENST00000496549 FANCEQ9HB96 536 aa8.37□□□□□ -1.07
CRNKL1-205ENST00000496549 PKD2L1Q9P0L9 805 aa8.37□□□□□ -1.07
CRNKL1-205ENST00000496549 CNOT11Q9UKZ1 510 aaKnown RBP8.37□□□□□ -1.07
CRNKL1-205ENST00000496549 BCL9O00512 1426 aa8.36□□□□□ -1.07
CRNKL1-205ENST00000496549 GTPBP10A4D1E9 387 aaKnown RBP8.36□□□□□ -1.07
CRNKL1-205ENST00000496549 GNGT2O14610 69 aa8.36□□□□□ -1.07
CRNKL1-205ENST00000496549 ZBTB5O15062 677 aa8.36□□□□□ -1.07
CRNKL1-205ENST00000496549 ATMINO43313 823 aaPredicted RBP8.36□□□□□ -1.07
CRNKL1-205ENST00000496549 EXTL3O43909 919 aa8.36□□□□□ -1.07
CRNKL1-205ENST00000496549 TYROBPO43914 113 aa8.36□□□□□ -1.07
CRNKL1-205ENST00000496549 TNNC2P02585 160 aa8.36□□□□□ -1.07
CRNKL1-205ENST00000496549 KRT19P08727 400 aa8.36□□□□□ -1.07
CRNKL1-205ENST00000496549 ALAS1P13196 640 aa8.36□□□□□ -1.07
CRNKL1-205ENST00000496549 HOXC9P31274 260 aa8.36□□□□□ -1.07
CRNKL1-205ENST00000496549 IL6STP40189 918 aaPredicted RBP8.36□□□□□ -1.07
CRNKL1-205ENST00000496549 RAP1GAPP47736 663 aa8.36□□□□□ -1.07
CRNKL1-205ENST00000496549 RFX5P48382 616 aaPredicted RBP8.36□□□□□ -1.07
CRNKL1-205ENST00000496549 ANKRD26P1Q6NSI1 321 aa8.36□□□□□ -1.07
CRNKL1-205ENST00000496549 ILDR2Q71H61 639 aa8.36□□□□□ -1.07
CRNKL1-205ENST00000496549 ANKS1BQ7Z6G8 1248 aa8.36□□□□□ -1.07
CRNKL1-205ENST00000496549 KBTBD6Q86V97 674 aa8.36□□□□□ -1.07
CRNKL1-205ENST00000496549 STX12Q86Y82 276 aa8.36□□□□□ -1.07
CRNKL1-205ENST00000496549 PTCD2Q8WV60 388 aaKnown RBP8.36□□□□□ -1.07
CRNKL1-205ENST00000496549 SLCO2A1Q92959 643 aa8.36□□□□□ -1.07
CRNKL1-205ENST00000496549 TDRD1Q9BXT4 1180 aaKnown RBP8.36□□□□□ -1.07
CRNKL1-205ENST00000496549 TRIT1Q9H3H1 467 aaKnown RBP8.36□□□□□ -1.07
CRNKL1-205ENST00000496549 ENTPD7Q9NQZ7 604 aa8.36□□□□□ -1.07
CRNKL1-205ENST00000496549 ADPRHL2Q9NX46 363 aa8.36□□□□□ -1.07
CRNKL1-205ENST00000496549 HMGXB4Q9UGU5 601 aa8.36□□□□□ -1.07
CRNKL1-205ENST00000496549 A0A1W2PQ67 120 aa8.36□□□□□ -1.07
CRNKL1-205ENST00000496549 TRIM38O00635 465 aa8.36□□□□□ -1.07
CRNKL1-205ENST00000496549 KCNH1O95259 989 aa8.36□□□□□ -1.07
CRNKL1-205ENST00000496549 S100A9P06702 114 aaKnown RBP8.36□□□□□ -1.07
CRNKL1-205ENST00000496549 ADCY7P51828 1080 aa8.36□□□□□ -1.07
CRNKL1-205ENST00000496549 DLGAP5Q15398 846 aa8.36□□□□□ -1.07
CRNKL1-205ENST00000496549 CDONQ4KMG0 1287 aa8.36□□□□□ -1.07
CRNKL1-205ENST00000496549 EFHC2Q5JST6 749 aa8.36□□□□□ -1.07
CRNKL1-205ENST00000496549 JADE1Q6IE81 842 aa8.36□□□□□ -1.07
CRNKL1-205ENST00000496549 OR8H2Q8N162 312 aa8.36□□□□□ -1.07
CRNKL1-205ENST00000496549 BANPQ8N9N5 519 aa8.36□□□□□ -1.07
CRNKL1-205ENST00000496549 CABLES1Q8TDN4 633 aa8.36□□□□□ -1.07
CRNKL1-205ENST00000496549 ANKRD49Q8WVL7 239 aa8.36□□□□□ -1.07
CRNKL1-205ENST00000496549 PKP2Q99959 881 aa8.36□□□□□ -1.07
CRNKL1-205ENST00000496549 YTHDF1Q9BYJ9 559 aaKnown RBP8.36□□□□□ -1.07
CRNKL1-205ENST00000496549 TCF7L2Q9NQB0 619 aa8.36□□□□□ -1.07
CRNKL1-205ENST00000496549 CPSF3Q9UKF6 684 aaKnown RBP8.36□□□□□ -1.07
CRNKL1-205ENST00000496549 CDH7Q9ULB5 785 aa8.36□□□□□ -1.07
CRNKL1-205ENST00000496549 PPME1Q9Y570 386 aa8.36□□□□□ -1.07
CRNKL1-205ENST00000496549 RGSL1A5PLK6 1076 aa8.36□□□□□ -1.07
CRNKL1-205ENST00000496549 POTEMA6NI47 508 aa8.36□□□□□ -1.07
CRNKL1-205ENST00000496549 BHMG1C9JSJ3 638 aaPredicted RBP8.36□□□□□ -1.07
CRNKL1-205ENST00000496549 ATP6V1G2-DDX39BF2Z307 99 aa8.36□□□□□ -1.07
CRNKL1-205ENST00000496549 KLF11O14901 512 aa8.36□□□□□ -1.07
CRNKL1-205ENST00000496549 SRP72O76094 671 aaKnown RBP8.36□□□□□ -1.07
CRNKL1-205ENST00000496549 SERPINE1P05121 402 aa8.36□□□□□ -1.07
CRNKL1-205ENST00000496549 ITGALP20701 1170 aa8.36□□□□□ -1.07
CRNKL1-205ENST00000496549 ETFBP38117 255 aa8.36□□□□□ -1.07
CRNKL1-205ENST00000496549 GALNT1Q10472 559 aaPredicted RBP8.36□□□□□ -1.07
CRNKL1-205ENST00000496549 COX10Q12887 443 aa8.36□□□□□ -1.07
CRNKL1-205ENST00000496549 RPS6KA2Q15349 733 aa8.36□□□□□ -1.07
CRNKL1-205ENST00000496549 SLX4IPQ5VYV7 408 aa8.36□□□□□ -1.07
CRNKL1-205ENST00000496549 PAGE2Q7Z2X7 111 aa8.36□□□□□ -1.07
CRNKL1-205ENST00000496549 SLC38A6Q8IZM9 456 aa8.36□□□□□ -1.07
CRNKL1-205ENST00000496549 PNMA1Q8ND90 353 aa8.36□□□□□ -1.07
CRNKL1-205ENST00000496549 LNX1Q8TBB1 728 aaPredicted RBP8.36□□□□□ -1.07
CRNKL1-205ENST00000496549 AGR3Q8TD06 166 aa8.36□□□□□ -1.07
CRNKL1-205ENST00000496549 GLT1D1Q96MS3 346 aa8.36□□□□□ -1.07
CRNKL1-205ENST00000496549 ADI1Q9BV57 179 aa8.36□□□□□ -1.07
CRNKL1-205ENST00000496549 INO80BQ9C086 356 aaPredicted RBP8.36□□□□□ -1.07
CRNKL1-205ENST00000496549 SCPEP1Q9HB40 452 aa8.36□□□□□ -1.07
CRNKL1-205ENST00000496549 RIC8BQ9NVN3 520 aa8.36□□□□□ -1.07
CRNKL1-205ENST00000496549 PAQR5Q9NXK6 330 aaPredicted RBP8.36□□□□□ -1.07
CRNKL1-205ENST00000496549 NIP7Q9Y221 180 aaKnown RBP eCLIP8.36□□□□□ -1.07
CRNKL1-205ENST00000496549 DISP2A7MBM2 1401 aa8.36□□□□□ -1.07
CRNKL1-205ENST00000496549 E7ENX8 843 aa8.35□□□□□ -1.07
CRNKL1-205ENST00000496549 TOR1BO14657 336 aa8.35□□□□□ -1.07
CRNKL1-205ENST00000496549 TBX1O43435 398 aa8.35□□□□□ -1.07
CRNKL1-205ENST00000496549 SGTAO43765 313 aa8.35□□□□□ -1.07
CRNKL1-205ENST00000496549 PRKCAP17252 672 aa8.35□□□□□ -1.07
CRNKL1-205ENST00000496549 FAAP100Q0VG06 881 aa8.35□□□□□ -1.07
CRNKL1-205ENST00000496549 DSC3Q14574 896 aa8.35□□□□□ -1.07
CRNKL1-205ENST00000496549 STILQ15468 1287 aa8.35□□□□□ -1.07
CRNKL1-205ENST00000496549 FASTKD1Q53R41 847 aaKnown RBP8.35□□□□□ -1.07
CRNKL1-205ENST00000496549 RAB43Q86YS6 212 aa8.35□□□□□ -1.07
CRNKL1-205ENST00000496549 PM20D2Q8IYS1 436 aa8.35□□□□□ -1.07
CRNKL1-205ENST00000496549 LSMEM2Q8N112 164 aa8.35□□□□□ -1.07
CRNKL1-205ENST00000496549 CACTIN-AS1Q8N1I8 211 aa8.35□□□□□ -1.07
CRNKL1-205ENST00000496549 FIBCD1Q8N539 461 aa8.35□□□□□ -1.07
CRNKL1-205ENST00000496549 OR5H6Q8NGV6 325 aa8.35□□□□□ -1.07
CRNKL1-205ENST00000496549 MCFD2Q8NI22 146 aa8.35□□□□□ -1.07
CRNKL1-205ENST00000496549 SLC22A8Q8TCC7 542 aa8.35□□□□□ -1.07
CRNKL1-205ENST00000496549 NUAK2Q9H093 628 aa8.35□□□□□ -1.07
CRNKL1-205ENST00000496549 KIAA1522Q9P206 1035 aaPredicted RBP8.35□□□□□ -1.07
CRNKL1-205ENST00000496549 NXF1Q9UBU9 619 aaKnown RBP8.35□□□□□ -1.07
CRNKL1-205ENST00000496549 CHORDC1Q9UHD1 332 aaPredicted RBP8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms