RNA–Protein interactions for RNA: ENST00000496037.1

SMARCAL1-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 542 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-213ENST00000496037 EBF2Q9HAK2 575 aa10.06□□□□□ -0.8
SMARCAL1-213ENST00000496037 USP29Q9HBJ7 922 aa10.06□□□□□ -0.8
SMARCAL1-213ENST00000496037 FBXL12Q9NXK8 326 aa10.06□□□□□ -0.8
SMARCAL1-213ENST00000496037 SEPT10Q9P0V9 454 aa10.06□□□□□ -0.8
SMARCAL1-213ENST00000496037 VTI1BQ9UEU0 232 aa10.06□□□□□ -0.8
SMARCAL1-213ENST00000496037 PLAAQ9Y263 795 aa10.06□□□□□ -0.8
SMARCAL1-213ENST00000496037 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.06□□□□□ -0.8
SMARCAL1-213ENST00000496037 ENTPD2Q9Y5L3 495 aa10.06□□□□□ -0.8
SMARCAL1-213ENST00000496037 CYP46A1Q9Y6A2 500 aa10.06□□□□□ -0.8
SMARCAL1-213ENST00000496037 CENPEQ02224 2701 aa10.06□□□□□ -0.8
SMARCAL1-213ENST00000496037 ZFHX3Q15911 3703 aa10.06□□□□□ -0.8
SMARCAL1-213ENST00000496037 CELSR2Q9HCU4 2923 aa10.06□□□□□ -0.8
SMARCAL1-213ENST00000496037 ATP8B3O60423 1300 aa10.06□□□□□ -0.8
SMARCAL1-213ENST00000496037 CRYBG3Q68DQ2 2970 aa10.05□□□□□ -0.8
SMARCAL1-213ENST00000496037 LCE2BO14633 110 aa10.05□□□□□ -0.8
SMARCAL1-213ENST00000496037 RNASEH1O60930 286 aaKnown RBP10.05□□□□□ -0.8
SMARCAL1-213ENST00000496037 RTN2O75298 545 aa10.05□□□□□ -0.8
SMARCAL1-213ENST00000496037 FBXO45P0C2W1 286 aa10.05□□□□□ -0.8
SMARCAL1-213ENST00000496037 TMEM191BP0C7N4 346 aa10.05□□□□□ -0.8
SMARCAL1-213ENST00000496037 ZDHHC11BP0C7U3 371 aa10.05□□□□□ -0.8
SMARCAL1-213ENST00000496037 WARSP23381 471 aaKnown RBP10.05□□□□□ -0.8
SMARCAL1-213ENST00000496037 CHKAP35790 457 aa10.05□□□□□ -0.8
SMARCAL1-213ENST00000496037 ATP5C1P36542 298 aaKnown RBP10.05□□□□□ -0.8
SMARCAL1-213ENST00000496037 CCR5P51681 352 aa10.05□□□□□ -0.8
SMARCAL1-213ENST00000496037 SH3BP2P78314 561 aa10.05□□□□□ -0.8
SMARCAL1-213ENST00000496037 OVGP1Q12889 678 aa10.05□□□□□ -0.8
SMARCAL1-213ENST00000496037 SRSF6Q13247 344 aaKnown RBP10.05□□□□□ -0.8
SMARCAL1-213ENST00000496037 KCNAB2Q13303 367 aa10.05□□□□□ -0.8
SMARCAL1-213ENST00000496037 MORC3Q14149 939 aa10.05□□□□□ -0.8
SMARCAL1-213ENST00000496037 KCNJ12Q14500 433 aa10.05□□□□□ -0.8
SMARCAL1-213ENST00000496037 KRTAP21-3Q3LHN1 58 aa10.05□□□□□ -0.8
SMARCAL1-213ENST00000496037 NAPEPLDQ6IQ20 393 aa10.05□□□□□ -0.8
SMARCAL1-213ENST00000496037 KCNK18Q7Z418 384 aa10.05□□□□□ -0.8
SMARCAL1-213ENST00000496037 JAMLQ86YT9 394 aa10.05□□□□□ -0.8
SMARCAL1-213ENST00000496037 TICAM1Q8IUC6 712 aa10.05□□□□□ -0.8
SMARCAL1-213ENST00000496037 RBBP8NLQ8NC74 664 aaPredicted RBP10.05□□□□□ -0.8
SMARCAL1-213ENST00000496037 EHBP1Q8NDI1 1231 aa10.05□□□□□ -0.8
SMARCAL1-213ENST00000496037 SSC4DQ8WTU2 575 aa10.05□□□□□ -0.8
SMARCAL1-213ENST00000496037 CYB5D2Q8WUJ1 264 aa10.05□□□□□ -0.8
SMARCAL1-213ENST00000496037 POMGNT1Q8WZA1 660 aa10.05□□□□□ -0.8
SMARCAL1-213ENST00000496037 ARRDC3Q96B67 414 aa10.05□□□□□ -0.8
SMARCAL1-213ENST00000496037 MRFAP1L1Q96HT8 127 aa10.05□□□□□ -0.8
SMARCAL1-213ENST00000496037 PIWIL1Q96J94 861 aaKnown RBP10.05□□□□□ -0.8
SMARCAL1-213ENST00000496037 APOLD1Q96LR9 279 aa10.05□□□□□ -0.8
SMARCAL1-213ENST00000496037 TMEM245Q9H330 911 aa10.05□□□□□ -0.8
SMARCAL1-213ENST00000496037 SNX25Q9H3E2 840 aa10.05□□□□□ -0.8
SMARCAL1-213ENST00000496037 PCDH12Q9NPG4 1184 aa10.05□□□□□ -0.8
SMARCAL1-213ENST00000496037 CYLDQ9NQC7 956 aa10.05□□□□□ -0.8
SMARCAL1-213ENST00000496037 PRSS16Q9NQE7 514 aa10.05□□□□□ -0.8
SMARCAL1-213ENST00000496037 TLR8Q9NR97 1041 aaKnown RBP10.05□□□□□ -0.8
SMARCAL1-213ENST00000496037 TMEM30AQ9NV96 361 aa10.05□□□□□ -0.8
SMARCAL1-213ENST00000496037 NBASA2RRP1 2371 aa10.04□□□□□ -0.8
SMARCAL1-213ENST00000496037 DNHD1Q96M86 4753 aa10.04□□□□□ -0.8
SMARCAL1-213ENST00000496037 A0A1W2PP55 124 aa10.04□□□□□ -0.8
SMARCAL1-213ENST00000496037 A1L4Q6 167 aa10.04□□□□□ -0.8
SMARCAL1-213ENST00000496037 PMS2P1A4D2B8 440 aa10.04□□□□□ -0.8
SMARCAL1-213ENST00000496037 TISP43B9A030 160 aa10.04□□□□□ -0.8
SMARCAL1-213ENST00000496037 ANKRD63C9JTQ0 380 aa10.04□□□□□ -0.8
SMARCAL1-213ENST00000496037 RNASEH2AO75792 299 aaKnown RBP10.04□□□□□ -0.8
SMARCAL1-213ENST00000496037 FAM13AO94988 1023 aa10.04□□□□□ -0.8
SMARCAL1-213ENST00000496037 TBX18O95935 607 aa10.04□□□□□ -0.8
SMARCAL1-213ENST00000496037 S100BP04271 92 aaPredicted RBP10.04□□□□□ -0.8
SMARCAL1-213ENST00000496037 LIPCP11150 499 aa10.04□□□□□ -0.8
SMARCAL1-213ENST00000496037 DGKAP23743 735 aa10.04□□□□□ -0.8
SMARCAL1-213ENST00000496037 OXCT1P55809 520 aa10.04□□□□□ -0.8
SMARCAL1-213ENST00000496037 TGIF1Q15583 401 aa10.04□□□□□ -0.8
SMARCAL1-213ENST00000496037 OCLNQ16625 522 aa10.04□□□□□ -0.8
SMARCAL1-213ENST00000496037 LINC01559Q495D7 138 aa10.04□□□□□ -0.8
SMARCAL1-213ENST00000496037 FHL5Q5TD97 284 aa10.04□□□□□ -0.8
SMARCAL1-213ENST00000496037 ZNF787Q6DD87 383 aa10.04□□□□□ -0.8
SMARCAL1-213ENST00000496037 BORAQ6PGQ7 559 aa10.04□□□□□ -0.8
SMARCAL1-213ENST00000496037 IQCHQ86VS3 1027 aa10.04□□□□□ -0.8
SMARCAL1-213ENST00000496037 SLC25A45Q8N413 288 aa10.04□□□□□ -0.8
SMARCAL1-213ENST00000496037 MYCT1Q8N699 235 aa10.04□□□□□ -0.8
SMARCAL1-213ENST00000496037 SYT2Q8N9I0 419 aaPredicted RBP10.04□□□□□ -0.8
SMARCAL1-213ENST00000496037 ZNF511Q8NB15 262 aa10.04□□□□□ -0.8
SMARCAL1-213ENST00000496037 HPDLQ96IR7 371 aa10.04□□□□□ -0.8
SMARCAL1-213ENST00000496037 OMDQ99983 421 aa10.04□□□□□ -0.8
SMARCAL1-213ENST00000496037 FAM213AQ9BRX8 229 aa10.04□□□□□ -0.8
SMARCAL1-213ENST00000496037 FUCA2Q9BTY2 467 aa10.04□□□□□ -0.8
SMARCAL1-213ENST00000496037 COMMD8Q9NX08 183 aa10.04□□□□□ -0.8
SMARCAL1-213ENST00000496037 MAP10Q9P2G4 905 aa10.04□□□□□ -0.8
SMARCAL1-213ENST00000496037 DMGDHQ9UI17 866 aaKnown RBP10.04□□□□□ -0.8
SMARCAL1-213ENST00000496037 ODF2LQ9ULJ1 636 aa10.04□□□□□ -0.8
SMARCAL1-213ENST00000496037 FZD4Q9ULV1 537 aa10.04□□□□□ -0.8
SMARCAL1-213ENST00000496037 ZNF510Q9Y2H8 683 aa10.04□□□□□ -0.8
SMARCAL1-213ENST00000496037 OTOGQ6ZRI0 2925 aa10.04□□□□□ -0.8
SMARCAL1-213ENST00000496037 MYH11P35749 1972 aa10.03□□□□□ -0.8
SMARCAL1-213ENST00000496037 CCDC187A0A096LP49 1063 aa10.03□□□□□ -0.8
SMARCAL1-213ENST00000496037 NPHP3-ACAD11A0A0J9YXS1 232 aa10.03□□□□□ -0.8
SMARCAL1-213ENST00000496037 VPS37CA5D8V6 355 aaPredicted RBP10.03□□□□□ -0.8
SMARCAL1-213ENST00000496037 PP2D1A8MPX8 630 aa10.03□□□□□ -0.8
SMARCAL1-213ENST00000496037 CLDN5O00501 218 aa10.03□□□□□ -0.8
SMARCAL1-213ENST00000496037 CDC45O75419 566 aa10.03□□□□□ -0.8
SMARCAL1-213ENST00000496037 TCEA3O75764 348 aa10.03□□□□□ -0.8
SMARCAL1-213ENST00000496037 PTPN1P18031 435 aaKnown RBP10.03□□□□□ -0.8
SMARCAL1-213ENST00000496037 TGM2P21980 687 aa10.03□□□□□ -0.8
SMARCAL1-213ENST00000496037 SLC5A2P31639 672 aa10.03□□□□□ -0.8
SMARCAL1-213ENST00000496037 GNL1P36915 607 aaPredicted RBP10.03□□□□□ -0.8
SMARCAL1-213ENST00000496037 PLA2G4AP47712 749 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms