RNA–Protein interactions for RNA: ENST00000495955.5

GAPVD1-219, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 1 (best) BASIC

Gene GAPVD1, Length 5,309 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-219ENST00000495955 KBTBD7Q8WVZ9 684 aa9.71□□□□□ -0.86
GAPVD1-219ENST00000495955 TM6SF2Q9BZW4 377 aa9.71□□□□□ -0.86
GAPVD1-219ENST00000495955 BRD8Q9H0E9 1235 aa9.71□□□□□ -0.86
GAPVD1-219ENST00000495955 SEPT3Q9UH03 358 aa9.71□□□□□ -0.86
GAPVD1-219ENST00000495955 RBAK-RBAKDNI3L0D1 243 aa9.71□□□□□ -0.86
GAPVD1-219ENST00000495955 DNAJC6O75061 913 aa9.71□□□□□ -0.86
GAPVD1-219ENST00000495955 CLDN11O75508 207 aa9.71□□□□□ -0.86
GAPVD1-219ENST00000495955 KIAA0754O94854 1291 aa9.71□□□□□ -0.86
GAPVD1-219ENST00000495955 CYP11A1P05108 521 aa9.71□□□□□ -0.86
GAPVD1-219ENST00000495955 ERCC2P18074 760 aa9.71□□□□□ -0.86
GAPVD1-219ENST00000495955 SEC13P55735 322 aa9.71□□□□□ -0.86
GAPVD1-219ENST00000495955 TMPRSS15P98073 1019 aa9.71□□□□□ -0.86
GAPVD1-219ENST00000495955 BCL2L1Q07817 233 aa9.71□□□□□ -0.86
GAPVD1-219ENST00000495955 CCDC142Q17RM4 750 aa9.71□□□□□ -0.86
GAPVD1-219ENST00000495955 ZRANB3Q5FWF4 1079 aa9.71□□□□□ -0.86
GAPVD1-219ENST00000495955 LRRC38Q5VT99 294 aa9.71□□□□□ -0.86
GAPVD1-219ENST00000495955 SYPL2Q5VXT5 272 aa9.71□□□□□ -0.86
GAPVD1-219ENST00000495955 ERAP2Q6P179 960 aa9.71□□□□□ -0.86
GAPVD1-219ENST00000495955 PPM1NQ8N819 430 aa9.71□□□□□ -0.86
GAPVD1-219ENST00000495955 CYP2S1Q96SQ9 504 aa9.71□□□□□ -0.86
GAPVD1-219ENST00000495955 OMDQ99983 421 aa9.71□□□□□ -0.86
GAPVD1-219ENST00000495955 DDX23Q9BUQ8 820 aaKnown RBP9.71□□□□□ -0.86
GAPVD1-219ENST00000495955 SLC4A5Q9BY07 1137 aa9.71□□□□□ -0.86
GAPVD1-219ENST00000495955 LMAN2LQ9H0V9 348 aa9.71□□□□□ -0.86
GAPVD1-219ENST00000495955 CXCL16Q9H2A7 254 aa9.71□□□□□ -0.86
GAPVD1-219ENST00000495955 TDP1Q9NUW8 608 aa9.71□□□□□ -0.86
GAPVD1-219ENST00000495955 IRAK4Q9NWZ3 460 aa9.71□□□□□ -0.86
GAPVD1-219ENST00000495955 NEU2Q9Y3R4 380 aa9.71□□□□□ -0.86
GAPVD1-219ENST00000495955 C2orf81A6NN90 581 aa9.7□□□□□ -0.86
GAPVD1-219ENST00000495955 RAD51CO43502 376 aa9.7□□□□□ -0.86
GAPVD1-219ENST00000495955 MT-ND3P03897 115 aa9.7□□□□□ -0.86
GAPVD1-219ENST00000495955 UNGP13051 313 aaPredicted RBP9.7□□□□□ -0.86
GAPVD1-219ENST00000495955 FGFR3P22607 806 aa9.7□□□□□ -0.86
GAPVD1-219ENST00000495955 FNTAP49354 379 aa9.7□□□□□ -0.86
GAPVD1-219ENST00000495955 FAM189BP81408 668 aa9.7□□□□□ -0.86
GAPVD1-219ENST00000495955 AADACL2Q6P093 401 aa9.7□□□□□ -0.86
GAPVD1-219ENST00000495955 ZNF598Q86UK7 904 aaKnown RBP9.7□□□□□ -0.86
GAPVD1-219ENST00000495955 CIR1Q86X95 450 aaPredicted RBP9.7□□□□□ -0.86
GAPVD1-219ENST00000495955 CCDC185Q8N715 623 aa9.7□□□□□ -0.86
GAPVD1-219ENST00000495955 LMO3Q8TAP4 145 aa9.7□□□□□ -0.86
GAPVD1-219ENST00000495955 EXT2Q93063 718 aa9.7□□□□□ -0.86
GAPVD1-219ENST00000495955 PBXIP1Q96AQ6 731 aa9.7□□□□□ -0.86
GAPVD1-219ENST00000495955 SMC6Q96SB8 1091 aa9.7□□□□□ -0.86
GAPVD1-219ENST00000495955 ITIH2P19823 946 aa9.7□□□□□ -0.86
GAPVD1-219ENST00000495955 GAD2Q05329 585 aa9.7□□□□□ -0.86
GAPVD1-219ENST00000495955 ALKAL1Q6UXT8 129 aa9.7□□□□□ -0.86
GAPVD1-219ENST00000495955 HFE2Q6ZVN8 426 aa9.7□□□□□ -0.86
GAPVD1-219ENST00000495955 MYLK4Q86YV6 388 aaPredicted RBP9.7□□□□□ -0.86
GAPVD1-219ENST00000495955 AFAP1L2Q8N4X5 818 aa9.7□□□□□ -0.86
GAPVD1-219ENST00000495955 ATXN7L3BQ96GX2 97 aa9.7□□□□□ -0.86
GAPVD1-219ENST00000495955 CDCA3Q99618 268 aaPredicted RBP9.7□□□□□ -0.86
GAPVD1-219ENST00000495955 TASP1Q9H6P5 420 aa9.7□□□□□ -0.86
GAPVD1-219ENST00000495955 SNX10Q9Y5X0 201 aa9.7□□□□□ -0.86
GAPVD1-219ENST00000495955 WASP42768 502 aa9.7□□□□□ -0.86
GAPVD1-219ENST00000495955 PTPN9P43378 593 aa9.7□□□□□ -0.86
GAPVD1-219ENST00000495955 CLDN10P78369 228 aa9.7□□□□□ -0.86
GAPVD1-219ENST00000495955 NSUN2Q08J23 767 aaKnown RBP eCLIP9.7□□□□□ -0.86
GAPVD1-219ENST00000495955 GRM2Q14416 872 aa9.7□□□□□ -0.86
GAPVD1-219ENST00000495955 CCNG2Q16589 344 aa9.7□□□□□ -0.86
GAPVD1-219ENST00000495955 CHST9Q7L1S5 443 aa9.7□□□□□ -0.86
GAPVD1-219ENST00000495955 PPIL6Q8IXY8 311 aa9.7□□□□□ -0.86
GAPVD1-219ENST00000495955 DNAJC5GQ8N7S2 189 aa9.7□□□□□ -0.86
GAPVD1-219ENST00000495955 MRPL43Q8N983 215 aaKnown RBP9.7□□□□□ -0.86
GAPVD1-219ENST00000495955 FLCNQ8NFG4 579 aa9.7□□□□□ -0.86
GAPVD1-219ENST00000495955 RNF157Q96PX1 679 aa9.7□□□□□ -0.86
GAPVD1-219ENST00000495955 ZC3H7BQ9UGR2 993 aaKnown RBP9.7□□□□□ -0.86
GAPVD1-219ENST00000495955 C2CD4BA6NLJ0 364 aa9.7□□□□□ -0.86
GAPVD1-219ENST00000495955 H3BQ06 376 aaPredicted RBP9.7□□□□□ -0.86
GAPVD1-219ENST00000495955 TMEM189-UBE2V1I3L0A0 370 aa9.7□□□□□ -0.86
GAPVD1-219ENST00000495955 RNF103O00237 685 aa9.7□□□□□ -0.86
GAPVD1-219ENST00000495955 ATXN1P54253 815 aaKnown RBP9.7□□□□□ -0.86
GAPVD1-219ENST00000495955 SNRPD1P62314 119 aaKnown RBP9.7□□□□□ -0.86
GAPVD1-219ENST00000495955 UBXN2BQ14CS0 331 aa9.7□□□□□ -0.86
GAPVD1-219ENST00000495955 FBXL19Q6PCT2 694 aa9.7□□□□□ -0.86
GAPVD1-219ENST00000495955 TMEM110Q86TL2 294 aa9.7□□□□□ -0.86
GAPVD1-219ENST00000495955 MCUQ8NE86 351 aa9.7□□□□□ -0.86
GAPVD1-219ENST00000495955 TRIM56Q9BRZ2 755 aaKnown RBP9.7□□□□□ -0.86
GAPVD1-219ENST00000495955 ZNF670Q9BS34 389 aa9.7□□□□□ -0.86
GAPVD1-219ENST00000495955 C10orf88Q9H8K7 445 aa9.7□□□□□ -0.86
GAPVD1-219ENST00000495955 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.69□□□□□ -0.86
GAPVD1-219ENST00000495955 APOC4-APOC2K7ER74 178 aa9.69□□□□□ -0.86
GAPVD1-219ENST00000495955 BEST1O76090 585 aa9.69□□□□□ -0.86
GAPVD1-219ENST00000495955 APOC2P02655 101 aa9.69□□□□□ -0.86
GAPVD1-219ENST00000495955 ITGA8P53708 1063 aa9.69□□□□□ -0.86
GAPVD1-219ENST00000495955 SGCGQ13326 291 aa9.69□□□□□ -0.86
GAPVD1-219ENST00000495955 MTSS1LQ765P7 747 aa9.69□□□□□ -0.86
GAPVD1-219ENST00000495955 RAB44Q7Z6P3 723 aaPredicted RBP9.69□□□□□ -0.86
GAPVD1-219ENST00000495955 GPATCH11Q8N954 259 aa9.69□□□□□ -0.86
GAPVD1-219ENST00000495955 ACTRT1Q8TDG2 376 aa9.69□□□□□ -0.86
GAPVD1-219ENST00000495955 LRRN4Q8WUT4 740 aa9.69□□□□□ -0.86
GAPVD1-219ENST00000495955 KXD1Q9BQD3 176 aa9.69□□□□□ -0.86
GAPVD1-219ENST00000495955 POLR1EQ9GZS1 481 aaKnown RBP9.69□□□□□ -0.86
GAPVD1-219ENST00000495955 CHST7Q9NS84 486 aa9.69□□□□□ -0.86
GAPVD1-219ENST00000495955 TLR6Q9Y2C9 796 aa9.69□□□□□ -0.86
GAPVD1-219ENST00000495955 PCDHGC5Q9Y5F6 944 aa9.69□□□□□ -0.86
GAPVD1-219ENST00000495955 IQANK1A0A1B0GTG1 560 aa9.69□□□□□ -0.86
GAPVD1-219ENST00000495955 BTNL10A8MVZ5 291 aa9.69□□□□□ -0.86
GAPVD1-219ENST00000495955 A8MX80 341 aa9.69□□□□□ -0.86
GAPVD1-219ENST00000495955 IL1BP01584 269 aa9.69□□□□□ -0.86
GAPVD1-219ENST00000495955 GSTA1P08263 222 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms