RNA–Protein interactions for RNA: ENST00000495899.1

MRPL55-233, Transcript of mitochondrial ribosomal protein L55, human

TSL 2

Gene MRPL55, Length 790 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL55-233	ENST00000495899	OTUD1	Q5VV17	481 aa	Predicted RBP	12.79	□□□□□ -0.36
MRPL55-233	ENST00000495899	EGFLAM	Q63HQ2	1017 aa		12.79	□□□□□ -0.36
MRPL55-233	ENST00000495899	RAP1GAP2	Q684P5	730 aa		12.79	□□□□□ -0.36
MRPL55-233	ENST00000495899	MON1B	Q7L1V2	547 aa		12.79	□□□□□ -0.36
MRPL55-233	ENST00000495899	CHSY1	Q86X52	802 aa		12.79	□□□□□ -0.36
MRPL55-233	ENST00000495899	MFN1	Q8IWA4	741 aa		12.79	□□□□□ -0.36
MRPL55-233	ENST00000495899	LGI2	Q8N0V4	545 aa		12.79	□□□□□ -0.36
MRPL55-233	ENST00000495899	C3orf20	Q8ND61	904 aa		12.79	□□□□□ -0.36
MRPL55-233	ENST00000495899	C1orf74	Q96LT6	269 aa		12.79	□□□□□ -0.36
MRPL55-233	ENST00000495899	TBCB	Q99426	244 aa		12.79	□□□□□ -0.36
MRPL55-233	ENST00000495899	HAUS4	Q9H6D7	363 aa		12.79	□□□□□ -0.36
MRPL55-233	ENST00000495899	CALCOCO1	Q9P1Z2	691 aa		12.79	□□□□□ -0.36
MRPL55-233	ENST00000495899	GGA2	Q9UJY4	613 aa		12.79	□□□□□ -0.36
MRPL55-233	ENST00000495899	PLA2G4C	Q9UP65	541 aa		12.79	□□□□□ -0.36
MRPL55-233	ENST00000495899	ITIH6	Q6UXX5	1313 aa		12.79	□□□□□ -0.36
MRPL55-233	ENST00000495899	PIEZO1	Q92508	2521 aa		12.79	□□□□□ -0.36
MRPL55-233	ENST00000495899	C2CD4B	A6NLJ0	364 aa		12.78	□□□□□ -0.36
MRPL55-233	ENST00000495899	BHMG1	C9JSJ3	638 aa	Predicted RBP	12.78	□□□□□ -0.36
MRPL55-233	ENST00000495899	PAGE1	O75459	146 aa		12.78	□□□□□ -0.36
MRPL55-233	ENST00000495899	RPP40	O75818	363 aa	Known RBP	12.78	□□□□□ -0.36
MRPL55-233	ENST00000495899	ATP5B	P06576	529 aa	Known RBP	12.78	□□□□□ -0.36
MRPL55-233	ENST00000495899	HOXB2	P14652	356 aa		12.78	□□□□□ -0.36
MRPL55-233	ENST00000495899	PDGFRA	P16234	1089 aa		12.78	□□□□□ -0.36
MRPL55-233	ENST00000495899	TFE3	P19532	575 aa	Predicted RBP	12.78	□□□□□ -0.36
MRPL55-233	ENST00000495899	HOXC13	P31276	330 aa		12.78	□□□□□ -0.36
MRPL55-233	ENST00000495899	SDC4	P31431	198 aa		12.78	□□□□□ -0.36
MRPL55-233	ENST00000495899	RDX	P35241	583 aa	Known RBP	12.78	□□□□□ -0.36
MRPL55-233	ENST00000495899	PTPN9	P43378	593 aa		12.78	□□□□□ -0.36
MRPL55-233	ENST00000495899	OXCT1	P55809	520 aa		12.78	□□□□□ -0.36
MRPL55-233	ENST00000495899	ZBED6	P86452	979 aa		12.78	□□□□□ -0.36
MRPL55-233	ENST00000495899	SLC12A1	Q13621	1099 aa		12.78	□□□□□ -0.36
MRPL55-233	ENST00000495899	CDH18	Q13634	790 aa		12.78	□□□□□ -0.36
MRPL55-233	ENST00000495899	AUH	Q13825	339 aa	Known RBP	12.78	□□□□□ -0.36
MRPL55-233	ENST00000495899	SIM2	Q14190	667 aa	Predicted RBP	12.78	□□□□□ -0.36
MRPL55-233	ENST00000495899	C5orf22	Q49AR2	442 aa		12.78	□□□□□ -0.36
MRPL55-233	ENST00000495899	USP39	Q53GS9	565 aa	Known RBP	12.78	□□□□□ -0.36
MRPL55-233	ENST00000495899	TMEM215	Q68D42	235 aa		12.78	□□□□□ -0.36
MRPL55-233	ENST00000495899	TRNP1	Q6NT89	227 aa		12.78	□□□□□ -0.36
MRPL55-233	ENST00000495899	ADIPOR2	Q86V24	386 aa		12.78	□□□□□ -0.36
MRPL55-233	ENST00000495899	C11orf74	Q86VG3	221 aa		12.78	□□□□□ -0.36
MRPL55-233	ENST00000495899	LAPTM4B	Q86VI4	370 aa		12.78	□□□□□ -0.36
MRPL55-233	ENST00000495899	MCOLN2	Q8IZK6	566 aa		12.78	□□□□□ -0.36
MRPL55-233	ENST00000495899	CFAP52	Q8N1V2	620 aa		12.78	□□□□□ -0.36
MRPL55-233	ENST00000495899	RXFP2	Q8WXD0	754 aa		12.78	□□□□□ -0.36
MRPL55-233	ENST00000495899	RUBCN	Q92622	972 aa		12.78	□□□□□ -0.36
MRPL55-233	ENST00000495899	LMLN	Q96KR4	655 aa		12.78	□□□□□ -0.36
MRPL55-233	ENST00000495899	CFAP57	Q96MR6	1250 aa		12.78	□□□□□ -0.36
MRPL55-233	ENST00000495899	HAPLN3	Q96S86	360 aa		12.78	□□□□□ -0.36
MRPL55-233	ENST00000495899	ACOX2	Q99424	681 aa		12.78	□□□□□ -0.36
MRPL55-233	ENST00000495899	SELENOO	Q9BVL4	669 aa		12.78	□□□□□ -0.36
MRPL55-233	ENST00000495899	CIPC	Q9C0C6	399 aa		12.78	□□□□□ -0.36
MRPL55-233	ENST00000495899	XPO4	Q9C0E2	1151 aa	Known RBP	12.78	□□□□□ -0.36
MRPL55-233	ENST00000495899	TKTL2	Q9H0I9	626 aa		12.78	□□□□□ -0.36
MRPL55-233	ENST00000495899	METTL5	Q9NRN9	209 aa	Known RBP	12.78	□□□□□ -0.36
MRPL55-233	ENST00000495899	ABCB8	Q9NUT2	735 aa		12.78	□□□□□ -0.36
MRPL55-233	ENST00000495899	KIAA1522	Q9P206	1035 aa	Predicted RBP	12.78	□□□□□ -0.36
MRPL55-233	ENST00000495899	STIM2	Q9P246	746 aa		12.78	□□□□□ -0.36
MRPL55-233	ENST00000495899	RAB23	Q9ULC3	237 aa		12.78	□□□□□ -0.36
MRPL55-233	ENST00000495899	LUC7L2	Q9Y383	392 aa	Known RBP	12.78	□□□□□ -0.36
MRPL55-233	ENST00000495899	UCHL5	Q9Y5K5	329 aa	Known RBP eCLIP	12.78	□□□□□ -0.36
MRPL55-233	ENST00000495899	HS3ST4	Q9Y661	456 aa		12.78	□□□□□ -0.36
MRPL55-233	ENST00000495899	STON1	Q9Y6Q2	735 aa		12.78	□□□□□ -0.36
MRPL55-233	ENST00000495899		A0A1W2PQF6	199 aa		12.77	□□□□□ -0.37
MRPL55-233	ENST00000495899	TCRBV5S1A1T	A0A578	114 aa		12.77	□□□□□ -0.37
MRPL55-233	ENST00000495899	FAM170A	A1A519	330 aa		12.77	□□□□□ -0.37
MRPL55-233	ENST00000495899	ANKRD62	A6NC57	917 aa		12.77	□□□□□ -0.37
MRPL55-233	ENST00000495899		H0Y626	953 aa		12.77	□□□□□ -0.37
MRPL55-233	ENST00000495899	LUC7L3	O95232	432 aa	Known RBP	12.77	□□□□□ -0.37
MRPL55-233	ENST00000495899	ADCY5	O95622	1261 aa		12.77	□□□□□ -0.37
MRPL55-233	ENST00000495899	DLD	P09622	509 aa	Known RBP	12.77	□□□□□ -0.37
MRPL55-233	ENST00000495899	POLR2E	P19388	210 aa	Known RBP	12.77	□□□□□ -0.37
MRPL55-233	ENST00000495899	RFC1	P35251	1148 aa	Predicted RBP	12.77	□□□□□ -0.37
MRPL55-233	ENST00000495899	BYSL	Q13895	437 aa	Known RBP	12.77	□□□□□ -0.37
MRPL55-233	ENST00000495899	STARD3	Q14849	445 aa		12.77	□□□□□ -0.37
MRPL55-233	ENST00000495899	CCDC14	Q49A88	953 aa		12.77	□□□□□ -0.37
MRPL55-233	ENST00000495899	LAIR1	Q6GTX8	287 aa		12.77	□□□□□ -0.37
MRPL55-233	ENST00000495899	ANO7	Q6IWH7	933 aa		12.77	□□□□□ -0.37
MRPL55-233	ENST00000495899	FBXL22	Q6P050	247 aa		12.77	□□□□□ -0.37
MRPL55-233	ENST00000495899	CEP68	Q76N32	757 aa		12.77	□□□□□ -0.37
MRPL55-233	ENST00000495899	CHST9	Q7L1S5	443 aa		12.77	□□□□□ -0.37
MRPL55-233	ENST00000495899	STRADA	Q7RTN6	431 aa		12.77	□□□□□ -0.37
MRPL55-233	ENST00000495899	ZNF571	Q7Z3V5	609 aa	Predicted RBP	12.77	□□□□□ -0.37
MRPL55-233	ENST00000495899	CARNMT1	Q8N4J0	409 aa		12.77	□□□□□ -0.37
MRPL55-233	ENST00000495899	EMC1	Q8N766	993 aa		12.77	□□□□□ -0.37
MRPL55-233	ENST00000495899	MDGA1	Q8NFP4	955 aa		12.77	□□□□□ -0.37
MRPL55-233	ENST00000495899	OLIG1	Q8TAK6	271 aa		12.77	□□□□□ -0.37
MRPL55-233	ENST00000495899	CENPI	Q92674	756 aa	Predicted RBP	12.77	□□□□□ -0.37
MRPL55-233	ENST00000495899	TTC17	Q96AE7	1141 aa		12.77	□□□□□ -0.37
MRPL55-233	ENST00000495899	MYEOV	Q96EZ4	313 aa		12.77	□□□□□ -0.37
MRPL55-233	ENST00000495899	ZC3H10	Q96K80	434 aa	Known RBP	12.77	□□□□□ -0.37
MRPL55-233	ENST00000495899	PPP1R9B	Q96SB3	815 aa		12.77	□□□□□ -0.37
MRPL55-233	ENST00000495899	CD248	Q9HCU0	757 aa		12.77	□□□□□ -0.37
MRPL55-233	ENST00000495899	ZDHHC4	Q9NPG8	344 aa		12.77	□□□□□ -0.37
MRPL55-233	ENST00000495899	CACNA2D2	Q9NY47	1150 aa		12.77	□□□□□ -0.37
MRPL55-233	ENST00000495899	SMG5	Q9UPR3	1016 aa	Known RBP	12.77	□□□□□ -0.37
MRPL55-233	ENST00000495899	KIAA1549L	Q6ZVL6	1849 aa		12.76	□□□□□ -0.37
MRPL55-233	ENST00000495899		A0A1B0GVM2	712 aa		12.76	□□□□□ -0.37
MRPL55-233	ENST00000495899	TCRBV21S2A2	A0A5A6	115 aa		12.76	□□□□□ -0.37
MRPL55-233	ENST00000495899	TCAF2	A6NFQ2	919 aa		12.76	□□□□□ -0.37
MRPL55-233	ENST00000495899	CLDN11	O75508	207 aa		12.76	□□□□□ -0.37

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