RNA–Protein interactions for RNA: ENST00000495835.1

HLA-C-209, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,073 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-209ENST00000495835 ARID5BQ14865 1188 aa25.07■■□□□ 1.6
HLA-C-209ENST00000495835 PTPN20Q4JDL3 420 aa25.07■■□□□ 1.6
HLA-C-209ENST00000495835 WDR45BQ5MNZ6 344 aa25.07■■□□□ 1.6
HLA-C-209ENST00000495835 ZNF677Q86XU0 584 aa25.07■■□□□ 1.6
HLA-C-209ENST00000495835 LGI2Q8N0V4 545 aa25.07■■□□□ 1.6
HLA-C-209ENST00000495835 CARNMT1Q8N4J0 409 aa25.07■■□□□ 1.6
HLA-C-209ENST00000495835 CYB5D2Q8WUJ1 264 aa25.07■■□□□ 1.6
HLA-C-209ENST00000495835 PCED1AQ9H1Q7 454 aa25.07■■□□□ 1.6
HLA-C-209ENST00000495835 SUSD2Q9UGT4 822 aa25.07■■□□□ 1.6
HLA-C-209ENST00000495835 NCOR2Q9Y618 2525 aa25.07■■□□□ 1.6
HLA-C-209ENST00000495835 F5H5T6 163 aa25.06■■□□□ 1.6
HLA-C-209ENST00000495835 PNMA6AP0CW24 399 aaPredicted RBP25.06■■□□□ 1.6
HLA-C-209ENST00000495835 MATKP42679 507 aa25.06■■□□□ 1.6
HLA-C-209ENST00000495835 OXCT1P55809 520 aa25.06■■□□□ 1.6
HLA-C-209ENST00000495835 KRT31Q15323 416 aa25.06■■□□□ 1.6
HLA-C-209ENST00000495835 FKBP15Q5T1M5 1219 aa25.06■■□□□ 1.6
HLA-C-209ENST00000495835 RAP1GAP2Q684P5 730 aa25.06■■□□□ 1.6
HLA-C-209ENST00000495835 CHSY1Q86X52 802 aa25.06■■□□□ 1.6
HLA-C-209ENST00000495835 MSANTD4Q8NCY6 345 aa25.06■■□□□ 1.6
HLA-C-209ENST00000495835 ANKRD20A12PQ8NF67 263 aa25.06■■□□□ 1.6
HLA-C-209ENST00000495835 RNF34Q969K3 372 aa25.06■■□□□ 1.6
HLA-C-209ENST00000495835 ERLEC1Q96DZ1 483 aa25.06■■□□□ 1.6
HLA-C-209ENST00000495835 TOE1Q96GM8 510 aaKnown RBP25.06■■□□□ 1.6
HLA-C-209ENST00000495835 HSPA12BQ96MM6 686 aa25.06■■□□□ 1.6
HLA-C-209ENST00000495835 PPP1R9BQ96SB3 815 aa25.06■■□□□ 1.6
HLA-C-209ENST00000495835 PRMT1Q99873 361 aaKnown RBP25.06■■□□□ 1.6
HLA-C-209ENST00000495835 TAB2Q9NYJ8 693 aa25.06■■□□□ 1.6
HLA-C-209ENST00000495835 XPO7Q9UIA9 1087 aaKnown RBP25.06■■□□□ 1.6
HLA-C-209ENST00000495835 CNOT1A5YKK6 2376 aaKnown RBP25.06■■□□□ 1.6
HLA-C-209ENST00000495835 F8VZ95 297 aa25.05■■□□□ 1.6
HLA-C-209ENST00000495835 H0Y626 953 aa25.05■■□□□ 1.6
HLA-C-209ENST00000495835 SRPRAP08240 638 aaKnown RBP25.05■■□□□ 1.6
HLA-C-209ENST00000495835 HLA-EP13747 358 aa25.05■■□□□ 1.6
HLA-C-209ENST00000495835 PITX1P78337 314 aaPredicted RBP25.05■■□□□ 1.6
HLA-C-209ENST00000495835 RABGAP1LQ5R372 815 aa25.05■■□□□ 1.6
HLA-C-209ENST00000495835 ACBD5Q5T8D3 534 aaPredicted RBP25.05■■□□□ 1.6
HLA-C-209ENST00000495835 CFAP52Q8N1V2 620 aa25.05■■□□□ 1.6
HLA-C-209ENST00000495835 DNASE2BQ8WZ79 361 aa25.05■■□□□ 1.6
HLA-C-209ENST00000495835 C18orf8Q96DM3 657 aa25.05■■□□□ 1.6
HLA-C-209ENST00000495835 MYEOVQ96EZ4 313 aa25.05■■□□□ 1.6
HLA-C-209ENST00000495835 VPS16Q9H269 839 aa25.05■■□□□ 1.6
HLA-C-209ENST00000495835 CAPN10Q9HC96 672 aa25.05■■□□□ 1.6
HLA-C-209ENST00000495835 PRSS16Q9NQE7 514 aa25.05■■□□□ 1.6
HLA-C-209ENST00000495835 INTS6Q9UL03 887 aaKnown RBP25.05■■□□□ 1.6
HLA-C-209ENST00000495835 SCML1Q9UN30 329 aa25.05■■□□□ 1.6
HLA-C-209ENST00000495835 SPTBN2O15020 2390 aa25.05■■□□□ 1.6
HLA-C-209ENST00000495835 F9P00740 461 aa25.04■■□□□ 1.6
HLA-C-209ENST00000495835 GNSP15586 552 aa25.04■■□□□ 1.6
HLA-C-209ENST00000495835 CSKP41240 450 aa25.04■■□□□ 1.6
HLA-C-209ENST00000495835 GFPT1Q06210 699 aaPredicted RBP25.04■■□□□ 1.6
HLA-C-209ENST00000495835 STX1AQ16623 288 aa25.04■■□□□ 1.6
HLA-C-209ENST00000495835 ERICH1Q86X53 443 aa25.04■■□□□ 1.6
HLA-C-209ENST00000495835 DEFB119Q8N690 84 aa25.04■■□□□ 1.6
HLA-C-209ENST00000495835 NT5C3BQ969T7 300 aa25.04■■□□□ 1.6
HLA-C-209ENST00000495835 PGAP3Q96FM1 320 aaPredicted RBP25.04■■□□□ 1.6
HLA-C-209ENST00000495835 MYO19Q96H55 970 aa25.04■■□□□ 1.6
HLA-C-209ENST00000495835 CD93Q9NPY3 652 aa25.04■■□□□ 1.6
HLA-C-209ENST00000495835 FANCLQ9NW38 375 aa25.04■■□□□ 1.6
HLA-C-209ENST00000495835 STAP1Q9ULZ2 295 aa25.04■■□□□ 1.6
HLA-C-209ENST00000495835 PAXBP1Q9Y5B6 917 aa25.04■■□□□ 1.6
HLA-C-209ENST00000495835 A0A1B0GVM2 712 aa25.03■■□□□ 1.6
HLA-C-209ENST00000495835 TCAF2A6NFQ2 919 aa25.03■■□□□ 1.6
HLA-C-209ENST00000495835 LRRC10BA6NIK2 292 aa25.03■■□□□ 1.6
HLA-C-209ENST00000495835 GRAP2O75791 330 aa25.03■■□□□ 1.6
HLA-C-209ENST00000495835 ENGP17813 658 aa25.03■■□□□ 1.6
HLA-C-209ENST00000495835 MYL5Q02045 173 aa25.03■■□□□ 1.6
HLA-C-209ENST00000495835 SFSWAPQ12872 951 aaKnown RBP25.03■■□□□ 1.6
HLA-C-209ENST00000495835 FSCBQ5H9T9 825 aa25.03■■□□□ 1.6
HLA-C-209ENST00000495835 PITRM1Q5JRX3 1037 aa25.03■■□□□ 1.6
HLA-C-209ENST00000495835 ARCQ7LC44 396 aa25.03■■□□□ 1.6
HLA-C-209ENST00000495835 RGL4Q8IZJ4 473 aa25.03■■□□□ 1.6
HLA-C-209ENST00000495835 NPY6RQ99463 290 aa25.03■■□□□ 1.6
HLA-C-209ENST00000495835 GANQ9H2C0 597 aa25.03■■□□□ 1.6
HLA-C-209ENST00000495835 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP25.03■■□□□ 1.6
HLA-C-209ENST00000495835 TARSL2A2RTX5 802 aaKnown RBP25.02■■□□□ 1.6
HLA-C-209ENST00000495835 M0QYT0 321 aa25.02■■□□□ 1.6
HLA-C-209ENST00000495835 KCNK5O95279 499 aa25.02■■□□□ 1.6
HLA-C-209ENST00000495835 CFIP05156 583 aa25.02■■□□□ 1.6
HLA-C-209ENST00000495835 SYPP08247 313 aa25.02■■□□□ 1.6
HLA-C-209ENST00000495835 CSRP1P21291 193 aaKnown RBP25.02■■□□□ 1.6
HLA-C-209ENST00000495835 PLK1P53350 603 aa25.02■■□□□ 1.6
HLA-C-209ENST00000495835 ECT2LQ008S8 904 aa25.02■■□□□ 1.6
HLA-C-209ENST00000495835 SULT2A1Q06520 285 aa25.02■■□□□ 1.6
HLA-C-209ENST00000495835 HNRNPA1L2Q32P51 320 aaKnown RBP25.02■■□□□ 1.6
HLA-C-209ENST00000495835 PLEKHG6Q3KR16 790 aa25.02■■□□□ 1.6
HLA-C-209ENST00000495835 BRMS1LQ5PSV4 323 aa25.02■■□□□ 1.6
HLA-C-209ENST00000495835 CCDC183Q5T5S1 534 aa25.02■■□□□ 1.6
HLA-C-209ENST00000495835 EPS8L1Q8TE68 723 aa25.02■■□□□ 1.6
HLA-C-209ENST00000495835 GPR174Q9BXC1 333 aa25.02■■□□□ 1.6
HLA-C-209ENST00000495835 LIMA1Q9UHB6 759 aaKnown RBP25.02■■□□□ 1.6
HLA-C-209ENST00000495835 ERVW-1Q9UQF0 538 aa25.02■■□□□ 1.6
HLA-C-209ENST00000495835 ATXN2Q99700 1313 aaKnown RBP25.02■■□□□ 1.6
HLA-C-209ENST00000495835 METTL12A8MUP2 240 aa25.01■■□□□ 1.59
HLA-C-209ENST00000495835 DNTTP04053 509 aa25.01■■□□□ 1.59
HLA-C-209ENST00000495835 VASPP50552 380 aaPredicted RBP25.01■■□□□ 1.59
HLA-C-209ENST00000495835 ATXN3P54252 364 aaPredicted RBP25.01■■□□□ 1.59
HLA-C-209ENST00000495835 NME3Q13232 169 aa25.01■■□□□ 1.59
HLA-C-209ENST00000495835 C5orf22Q49AR2 442 aa25.01■■□□□ 1.59
HLA-C-209ENST00000495835 SND1Q7KZF4 910 aaKnown RBP eCLIP25.01■■□□□ 1.593e-9■■■■□ 19.4
HLA-C-209ENST00000495835 NOP9Q86U38 636 aaKnown RBP25.01■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms