RNA–Protein interactions for RNA: ENST00000495497.1

HDAC4-212, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-212ENST00000495497 LCA5LO95447 670 aa20.05■□□□□ 0.8
HDAC4-212ENST00000495497 CHRM1P11229 460 aaPredicted RBP20.05■□□□□ 0.8
HDAC4-212ENST00000495497 TCF4P15884 667 aa20.05■□□□□ 0.8
HDAC4-212ENST00000495497 MIPP30301 263 aa20.05■□□□□ 0.8
HDAC4-212ENST00000495497 HOXC13P31276 330 aa20.05■□□□□ 0.8
HDAC4-212ENST00000495497 MAGEA9P43362 315 aa20.05■□□□□ 0.8
HDAC4-212ENST00000495497 NUMBP49757 651 aa20.05■□□□□ 0.8
HDAC4-212ENST00000495497 LMAN2Q12907 356 aa20.05■□□□□ 0.8
HDAC4-212ENST00000495497 C5orf22Q49AR2 442 aa20.05■□□□□ 0.8
HDAC4-212ENST00000495497 FBXO43Q4G163 708 aa20.05■□□□□ 0.8
HDAC4-212ENST00000495497 PREPLQ4J6C6 727 aaPredicted RBP20.05■□□□□ 0.8
HDAC4-212ENST00000495497 ALFQ53S48 1182 aa20.05■□□□□ 0.8
HDAC4-212ENST00000495497 TMEM215Q68D42 235 aa20.05■□□□□ 0.8
HDAC4-212ENST00000495497 ANKS1BQ7Z6G8 1248 aa20.05■□□□□ 0.8
HDAC4-212ENST00000495497 CCAR2Q8N163 923 aaKnown RBP20.05■□□□□ 0.8
HDAC4-212ENST00000495497 FIBINQ8TAL6 211 aa20.05■□□□□ 0.8
HDAC4-212ENST00000495497 SLC35G2Q8TBE7 412 aa20.05■□□□□ 0.8
HDAC4-212ENST00000495497 USP33Q8TEY7 942 aa20.05■□□□□ 0.8
HDAC4-212ENST00000495497 LMLNQ96KR4 655 aa20.05■□□□□ 0.8
HDAC4-212ENST00000495497 MPP6Q9NZW5 540 aa20.05■□□□□ 0.8
HDAC4-212ENST00000495497 OR12D3Q9UGF7 316 aa20.05■□□□□ 0.8
HDAC4-212ENST00000495497 GGA2Q9UJY4 613 aa20.05■□□□□ 0.8
HDAC4-212ENST00000495497 PCDHA13Q9Y5I0 950 aa20.05■□□□□ 0.8
HDAC4-212ENST00000495497 DRGXA6NNA5 263 aa20.04■□□□□ 0.8
HDAC4-212ENST00000495497 EIF3CLB5ME19 914 aaKnown RBP20.04■□□□□ 0.8
HDAC4-212ENST00000495497 RNF8O76064 485 aa20.04■□□□□ 0.8
HDAC4-212ENST00000495497 KIR2DL1P43626 348 aaPredicted RBP20.04■□□□□ 0.8
HDAC4-212ENST00000495497 SATB1Q01826 763 aa20.04■□□□□ 0.8
HDAC4-212ENST00000495497 CDH18Q13634 790 aa20.04■□□□□ 0.8
HDAC4-212ENST00000495497 CA9Q16790 459 aa20.04■□□□□ 0.8
HDAC4-212ENST00000495497 EGFLAMQ63HQ2 1017 aa20.04■□□□□ 0.8
HDAC4-212ENST00000495497 LRRC31Q6UY01 552 aa20.04■□□□□ 0.8
HDAC4-212ENST00000495497 CHST9Q7L1S5 443 aa20.04■□□□□ 0.8
HDAC4-212ENST00000495497 CCDC33Q8N5R6 958 aa20.04■□□□□ 0.8
HDAC4-212ENST00000495497 SORCS1Q8WY21 1168 aa20.04■□□□□ 0.8
HDAC4-212ENST00000495497 EIF3CQ99613 913 aaKnown RBP20.04■□□□□ 0.8
HDAC4-212ENST00000495497 OSBPL2Q9H1P3 480 aa20.04■□□□□ 0.8
HDAC4-212ENST00000495497 UVRAGQ9P2Y5 699 aa20.04■□□□□ 0.8
HDAC4-212ENST00000495497 IP6K2Q9UHH9 426 aa20.04■□□□□ 0.8
HDAC4-212ENST00000495497 KMT2EQ8IZD2 1858 aa20.04■□□□□ 0.8
HDAC4-212ENST00000495497 KIAA1549LQ6ZVL6 1849 aa20.04■□□□□ 0.8
HDAC4-212ENST00000495497 A0A1B0GVM2 712 aa20.03■□□□□ 0.8
HDAC4-212ENST00000495497 TCAF2A6NFQ2 919 aa20.03■□□□□ 0.8
HDAC4-212ENST00000495497 TMEM110-MUSTN1A8MSY1 372 aa20.03■□□□□ 0.8
HDAC4-212ENST00000495497 MYO1FO00160 1098 aa20.03■□□□□ 0.8
HDAC4-212ENST00000495497 PABPC1P11940 636 aaKnown RBP20.03■□□□□ 0.8
HDAC4-212ENST00000495497 SCAPQ12770 1279 aa20.03■□□□□ 0.8
HDAC4-212ENST00000495497 PIGHQ14442 188 aaPredicted RBP20.03■□□□□ 0.8
HDAC4-212ENST00000495497 SPA17Q15506 151 aa20.03■□□□□ 0.8
HDAC4-212ENST00000495497 EFHC2Q5JST6 749 aa20.03■□□□□ 0.8
HDAC4-212ENST00000495497 TTC39BQ5VTQ0 682 aaPredicted RBP20.03■□□□□ 0.8
HDAC4-212ENST00000495497 NUDT18Q6ZVK8 323 aa20.03■□□□□ 0.8
HDAC4-212ENST00000495497 CYP4V2Q6ZWL3 525 aaPredicted RBP20.03■□□□□ 0.8
HDAC4-212ENST00000495497 KIAA0907Q7Z7F0 614 aaPredicted RBP20.03■□□□□ 0.8
HDAC4-212ENST00000495497 C1orf210Q8IVY1 113 aa20.03■□□□□ 0.8
HDAC4-212ENST00000495497 CCDC117Q8IWD4 279 aaPredicted RBP20.03■□□□□ 0.8
HDAC4-212ENST00000495497 SPEM1Q8N4L4 309 aa20.03■□□□□ 0.8
HDAC4-212ENST00000495497 ALLCQ8N6M5 410 aa20.03■□□□□ 0.8
HDAC4-212ENST00000495497 ZNF513Q8N8E2 541 aaPredicted RBP20.03■□□□□ 0.8
HDAC4-212ENST00000495497 ACRBPQ8NEB7 543 aa20.03■□□□□ 0.8
HDAC4-212ENST00000495497 OR52K2Q8NGK3 314 aa20.03■□□□□ 0.8
HDAC4-212ENST00000495497 ACOX2Q99424 681 aa20.03■□□□□ 0.8
HDAC4-212ENST00000495497 CIPCQ9C0C6 399 aa20.03■□□□□ 0.8
HDAC4-212ENST00000495497 RAPGEFL1Q9UHV5 662 aa20.03■□□□□ 0.8
HDAC4-212ENST00000495497 USP18Q9UMW8 372 aa20.03■□□□□ 0.8
HDAC4-212ENST00000495497 REXO2Q9Y3B8 237 aaKnown RBP20.03■□□□□ 0.8
HDAC4-212ENST00000495497 IGLV3-10A0A075B6K4 115 aa20.02■□□□□ 0.8
HDAC4-212ENST00000495497 GALR2O43603 387 aaPredicted RBP20.02■□□□□ 0.8
HDAC4-212ENST00000495497 PRPSAP2O60256 369 aa20.02■□□□□ 0.8
HDAC4-212ENST00000495497 KLF8O95600 359 aaPredicted RBP20.02■□□□□ 0.8
HDAC4-212ENST00000495497 IL1R2P27930 398 aa20.02■□□□□ 0.8
HDAC4-212ENST00000495497 WASP42768 502 aa20.02■□□□□ 0.8
HDAC4-212ENST00000495497 CDH4P55283 916 aa20.02■□□□□ 0.8
HDAC4-212ENST00000495497 FUT11Q495W5 492 aa20.02■□□□□ 0.8
HDAC4-212ENST00000495497 MANEALQ5VSG8 457 aa20.02■□□□□ 0.8
HDAC4-212ENST00000495497 TSSK4Q6SA08 328 aa20.02■□□□□ 0.8
HDAC4-212ENST00000495497 TFAP2DQ7Z6R9 452 aa20.02■□□□□ 0.8
HDAC4-212ENST00000495497 ADIPOR2Q86V24 386 aa20.02■□□□□ 0.8
HDAC4-212ENST00000495497 MAML2Q8IZL2 1156 aaPredicted RBP20.02■□□□□ 0.8
HDAC4-212ENST00000495497 APCDD1Q8J025 514 aa20.02■□□□□ 0.8
HDAC4-212ENST00000495497 DDX51Q8N8A6 666 aaKnown RBP eCLIP20.02■□□□□ 0.8
HDAC4-212ENST00000495497 NIPA2Q8N8Q9 360 aa20.02■□□□□ 0.8
HDAC4-212ENST00000495497 IL17RCQ8NAC3 791 aa20.02■□□□□ 0.8
HDAC4-212ENST00000495497 TXNDC5Q8NBS9 432 aaKnown RBP20.02■□□□□ 0.8
HDAC4-212ENST00000495497 PRSS33Q8NF86 280 aa20.02■□□□□ 0.8
HDAC4-212ENST00000495497 SNRNP25Q9BV90 132 aaKnown RBP20.02■□□□□ 0.8
HDAC4-212ENST00000495497 ZWILCHQ9H900 591 aa20.02■□□□□ 0.8
HDAC4-212ENST00000495497 ELOVL2Q9NXB9 296 aa20.02■□□□□ 0.8
HDAC4-212ENST00000495497 INTS6Q9UL03 887 aaKnown RBP20.02■□□□□ 0.8
HDAC4-212ENST00000495497 INTUQ9ULD6 942 aa20.02■□□□□ 0.8
HDAC4-212ENST00000495497 AP4E1Q9UPM8 1137 aa20.02■□□□□ 0.8
HDAC4-212ENST00000495497 STARD13Q9Y3M8 1113 aa20.02■□□□□ 0.8
HDAC4-212ENST00000495497 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP20.01■□□□□ 0.79
HDAC4-212ENST00000495497 RCCD1A6NED2 376 aa20.01■□□□□ 0.79
HDAC4-212ENST00000495497 CHURC1-FNTBB4DL54 471 aa20.01■□□□□ 0.79
HDAC4-212ENST00000495497 LAMTOR5O43504 91 aa20.01■□□□□ 0.79
HDAC4-212ENST00000495497 CREB3O43889 395 aa20.01■□□□□ 0.79
HDAC4-212ENST00000495497 CLDN11O75508 207 aa20.01■□□□□ 0.79
HDAC4-212ENST00000495497 LRIG2O94898 1065 aa20.01■□□□□ 0.79
HDAC4-212ENST00000495497 PROSCO94903 275 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms