RNA–Protein interactions for RNA: ENST00000494610.1

CSNK1E-212, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-212ENST00000494610 RRAGAQ7L523 313 aa12.26□□□□□ -0.45
CSNK1E-212ENST00000494610 TMPRSS6Q8IU80 811 aa12.26□□□□□ -0.45
CSNK1E-212ENST00000494610 TMTC1Q8IUR5 882 aa12.26□□□□□ -0.45
CSNK1E-212ENST00000494610 LRRC8AQ8IWT6 810 aa12.26□□□□□ -0.45
CSNK1E-212ENST00000494610 TC2NQ8N9U0 490 aa12.26□□□□□ -0.45
CSNK1E-212ENST00000494610 C1orf216Q8TAB5 229 aa12.26□□□□□ -0.45
CSNK1E-212ENST00000494610 RHBDD1Q8TEB9 315 aa12.26□□□□□ -0.45
CSNK1E-212ENST00000494610 SNX19Q92543 992 aa12.26□□□□□ -0.45
CSNK1E-212ENST00000494610 FOXJ1Q92949 421 aa12.26□□□□□ -0.45
CSNK1E-212ENST00000494610 BAG1Q99933 345 aaPredicted RBP12.26□□□□□ -0.45
CSNK1E-212ENST00000494610 C6orf106Q9H6K1 298 aaPredicted RBP12.26□□□□□ -0.45
CSNK1E-212ENST00000494610 CYP3A43Q9HB55 503 aa12.26□□□□□ -0.45
CSNK1E-212ENST00000494610 CSNK1G1Q9HCP0 422 aa12.26□□□□□ -0.45
CSNK1E-212ENST00000494610 NLRC4Q9NPP4 1024 aa12.26□□□□□ -0.45
CSNK1E-212ENST00000494610 CYLDQ9NQC7 956 aa12.26□□□□□ -0.45
CSNK1E-212ENST00000494610 TLR8Q9NR97 1041 aaKnown RBP12.26□□□□□ -0.45
CSNK1E-212ENST00000494610 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.26□□□□□ -0.45
CSNK1E-212ENST00000494610 SUSD2Q9UGT4 822 aa12.26□□□□□ -0.45
CSNK1E-212ENST00000494610 FBXO10Q9UK96 956 aa12.26□□□□□ -0.45
CSNK1E-212ENST00000494610 APOBEC2Q9Y235 224 aaKnown RBP12.26□□□□□ -0.45
CSNK1E-212ENST00000494610 SNX11Q9Y5W9 270 aa12.26□□□□□ -0.45
CSNK1E-212ENST00000494610 ATP8B3O60423 1300 aa12.26□□□□□ -0.45
CSNK1E-212ENST00000494610 LRRC53A6NM62 1247 aa12.25□□□□□ -0.45
CSNK1E-212ENST00000494610 METTL12A8MUP2 240 aa12.25□□□□□ -0.45
CSNK1E-212ENST00000494610 CBX4O00257 560 aa12.25□□□□□ -0.45
CSNK1E-212ENST00000494610 BCAT2O15382 392 aaPredicted RBP12.25□□□□□ -0.45
CSNK1E-212ENST00000494610 ARHGAP6O43182 974 aa12.25□□□□□ -0.45
CSNK1E-212ENST00000494610 FECHP22830 423 aa12.25□□□□□ -0.45
CSNK1E-212ENST00000494610 ACSL1P33121 698 aa12.25□□□□□ -0.45
CSNK1E-212ENST00000494610 SOX5P35711 763 aa12.25□□□□□ -0.45
CSNK1E-212ENST00000494610 MATKP42679 507 aa12.25□□□□□ -0.45
CSNK1E-212ENST00000494610 ASPAP45381 313 aa12.25□□□□□ -0.45
CSNK1E-212ENST00000494610 ADKP55263 362 aaKnown RBP12.25□□□□□ -0.45
CSNK1E-212ENST00000494610 JAM2P57087 298 aa12.25□□□□□ -0.45
CSNK1E-212ENST00000494610 BPIFB4P59827 614 aa12.25□□□□□ -0.45
CSNK1E-212ENST00000494610 CAMK2BQ13554 666 aa12.25□□□□□ -0.45
CSNK1E-212ENST00000494610 CUL2Q13617 745 aa12.25□□□□□ -0.45
CSNK1E-212ENST00000494610 ZNF234Q14588 700 aa12.25□□□□□ -0.45
CSNK1E-212ENST00000494610 MEA1Q16626 185 aa12.25□□□□□ -0.45
CSNK1E-212ENST00000494610 PREPLQ4J6C6 727 aaPredicted RBP12.25□□□□□ -0.45
CSNK1E-212ENST00000494610 TMPRSS7Q7RTY8 843 aa12.25□□□□□ -0.45
CSNK1E-212ENST00000494610 GLRX5Q86SX6 157 aa12.25□□□□□ -0.45
CSNK1E-212ENST00000494610 TXLNBQ8N3L3 684 aa12.25□□□□□ -0.45
CSNK1E-212ENST00000494610 BAP1Q92560 729 aa12.25□□□□□ -0.45
CSNK1E-212ENST00000494610 SEMA4DQ92854 862 aa12.25□□□□□ -0.45
CSNK1E-212ENST00000494610 SIPA1Q96FS4 1042 aa12.25□□□□□ -0.45
CSNK1E-212ENST00000494610 TNIP3Q96KP6 325 aa12.25□□□□□ -0.45
CSNK1E-212ENST00000494610 UBE2TQ9NPD8 197 aaPredicted RBP12.25□□□□□ -0.45
CSNK1E-212ENST00000494610 LUC7LQ9NQ29 371 aaKnown RBP12.25□□□□□ -0.45
CSNK1E-212ENST00000494610 THAP10Q9P2Z0 257 aaPredicted RBP12.25□□□□□ -0.45
CSNK1E-212ENST00000494610 RASAL2Q9UJF2 1139 aa12.25□□□□□ -0.45
CSNK1E-212ENST00000494610 NAGPAQ9UK23 515 aa12.25□□□□□ -0.45
CSNK1E-212ENST00000494610 LSM7Q9UK45 103 aaKnown RBP12.25□□□□□ -0.45
CSNK1E-212ENST00000494610 SCML2Q9UQR0 700 aa12.25□□□□□ -0.45
CSNK1E-212ENST00000494610 CKAP5Q14008 2032 aa12.25□□□□□ -0.45
CSNK1E-212ENST00000494610 SSU72P8A0A1W2PR75 194 aa12.24□□□□□ -0.45
CSNK1E-212ENST00000494610 GFRA2O00451 464 aa12.24□□□□□ -0.45
CSNK1E-212ENST00000494610 EPHB6O15197 1021 aa12.24□□□□□ -0.45
CSNK1E-212ENST00000494610 CCP110O43303 1012 aa12.24□□□□□ -0.45
CSNK1E-212ENST00000494610 GFPT2O94808 682 aa12.24□□□□□ -0.45
CSNK1E-212ENST00000494610 PENKP01210 267 aaPredicted RBP12.24□□□□□ -0.45
CSNK1E-212ENST00000494610 SERPING1P05155 500 aa12.24□□□□□ -0.45
CSNK1E-212ENST00000494610 EPHX1P07099 455 aa12.24□□□□□ -0.45
CSNK1E-212ENST00000494610 FAM200BP0CF97 657 aa12.24□□□□□ -0.45
CSNK1E-212ENST00000494610 CYLC1P35663 651 aaPredicted RBP12.24□□□□□ -0.45
CSNK1E-212ENST00000494610 EFEMP1Q12805 493 aa12.24□□□□□ -0.45
CSNK1E-212ENST00000494610 LRMPQ12912 555 aa12.24□□□□□ -0.45
CSNK1E-212ENST00000494610 STARD3Q14849 445 aa12.24□□□□□ -0.45
CSNK1E-212ENST00000494610 DRAP1Q14919 205 aaPredicted RBP12.24□□□□□ -0.45
CSNK1E-212ENST00000494610 TDRD12Q587J7 1177 aaKnown RBP12.24□□□□□ -0.45
CSNK1E-212ENST00000494610 CCDC170Q8IYT3 715 aa12.24□□□□□ -0.45
CSNK1E-212ENST00000494610 CRYBG2Q8N1P7 616 aa12.24□□□□□ -0.45
CSNK1E-212ENST00000494610 RBBP8NLQ8NC74 664 aaPredicted RBP12.24□□□□□ -0.45
CSNK1E-212ENST00000494610 SHROOM3Q8TF72 1996 aa12.24□□□□□ -0.45
CSNK1E-212ENST00000494610 CYB5D2Q8WUJ1 264 aa12.24□□□□□ -0.45
CSNK1E-212ENST00000494610 SHC3Q92529 594 aa12.24□□□□□ -0.45
CSNK1E-212ENST00000494610 NDRG1Q92597 394 aaKnown RBP12.24□□□□□ -0.45
CSNK1E-212ENST00000494610 PIWIL1Q96J94 861 aaKnown RBP12.24□□□□□ -0.45
CSNK1E-212ENST00000494610 DCBLD2Q96PD2 775 aa12.24□□□□□ -0.45
CSNK1E-212ENST00000494610 CIPCQ9C0C6 399 aa12.24□□□□□ -0.45
CSNK1E-212ENST00000494610 DEF6Q9H4E7 631 aa12.24□□□□□ -0.45
CSNK1E-212ENST00000494610 MTG2Q9H4K7 406 aa12.24□□□□□ -0.45
CSNK1E-212ENST00000494610 FBXO44Q9H4M3 255 aa12.24□□□□□ -0.45
CSNK1E-212ENST00000494610 APOBEC3GQ9HC16 384 aaKnown RBP12.24□□□□□ -0.45
CSNK1E-212ENST00000494610 COMMD8Q9NX08 183 aa12.24□□□□□ -0.45
CSNK1E-212ENST00000494610 AIPL1Q9NZN9 384 aa12.24□□□□□ -0.45
CSNK1E-212ENST00000494610 AGO1Q9UL18 857 aaKnown RBP12.24□□□□□ -0.45
CSNK1E-212ENST00000494610 TSPAN3O60637 253 aa12.23□□□□□ -0.45
CSNK1E-212ENST00000494610 DKK1O94907 266 aa12.23□□□□□ -0.45
CSNK1E-212ENST00000494610 SKILP12757 684 aa12.23□□□□□ -0.45
CSNK1E-212ENST00000494610 CD58P19256 250 aa12.23□□□□□ -0.45
CSNK1E-212ENST00000494610 ITPKBP27987 946 aa12.23□□□□□ -0.45
CSNK1E-212ENST00000494610 CORO1AP31146 461 aaKnown RBP12.23□□□□□ -0.45
CSNK1E-212ENST00000494610 PRKCIP41743 596 aa12.23□□□□□ -0.45
CSNK1E-212ENST00000494610 PLA2G4AP47712 749 aa12.23□□□□□ -0.45
CSNK1E-212ENST00000494610 KLHL30Q0D2K2 578 aa12.23□□□□□ -0.45
CSNK1E-212ENST00000494610 ENPP2Q13822 863 aa12.23□□□□□ -0.45
CSNK1E-212ENST00000494610 ARHGAP44Q17R89 818 aa12.23□□□□□ -0.45
CSNK1E-212ENST00000494610 DPY19L2P1Q6NXN4 242 aa12.23□□□□□ -0.45
CSNK1E-212ENST00000494610 PPP1R2P3Q6NXS1 205 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms