RNA–Protein interactions for RNA: ENST00000494464.5

ERCC3-209, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 1,367 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-209ENST00000494464 TBL1XO60907 577 aa13.66□□□□□ -0.22
ERCC3-209ENST00000494464 MOCS2O96007 188 aaPredicted RBP13.66□□□□□ -0.22
ERCC3-209ENST00000494464 SLC2A3P11169 496 aa13.66□□□□□ -0.22
ERCC3-209ENST00000494464 GABRB2P47870 512 aa13.66□□□□□ -0.22
ERCC3-209ENST00000494464 PITX1P78337 314 aaPredicted RBP13.66□□□□□ -0.22
ERCC3-209ENST00000494464 CDK17Q00537 523 aa13.66□□□□□ -0.22
ERCC3-209ENST00000494464 SLC6A3Q01959 620 aa13.66□□□□□ -0.22
ERCC3-209ENST00000494464 CREB5Q02930 508 aa13.66□□□□□ -0.22
ERCC3-209ENST00000494464 MTA1Q13330 715 aa13.66□□□□□ -0.22
ERCC3-209ENST00000494464 SF3A2Q15428 464 aaKnown RBP13.66□□□□□ -0.22
ERCC3-209ENST00000494464 SYCP1Q15431 976 aa13.66□□□□□ -0.22
ERCC3-209ENST00000494464 FUT11Q495W5 492 aa13.66□□□□□ -0.22
ERCC3-209ENST00000494464 ZC3H12AQ5D1E8 599 aaKnown RBP13.66□□□□□ -0.22
ERCC3-209ENST00000494464 OR6B2Q6IFH4 312 aa13.66□□□□□ -0.22
ERCC3-209ENST00000494464 SERPINA13PQ6UXR4 307 aa13.66□□□□□ -0.22
ERCC3-209ENST00000494464 SLC36A4Q6YBV0 504 aa13.66□□□□□ -0.22
ERCC3-209ENST00000494464 CHST9Q7L1S5 443 aa13.66□□□□□ -0.22
ERCC3-209ENST00000494464 LPCAT2Q7L5N7 544 aa13.66□□□□□ -0.22
ERCC3-209ENST00000494464 DGLUCYQ7Z3D6 616 aa13.66□□□□□ -0.22
ERCC3-209ENST00000494464 CYP2U1Q7Z449 544 aa13.66□□□□□ -0.22
ERCC3-209ENST00000494464 METTL3Q86U44 580 aaKnown RBP13.66□□□□□ -0.22
ERCC3-209ENST00000494464 ADIPOR2Q86V24 386 aa13.66□□□□□ -0.22
ERCC3-209ENST00000494464 ZNF677Q86XU0 584 aa13.66□□□□□ -0.22
ERCC3-209ENST00000494464 MFN1Q8IWA4 741 aa13.66□□□□□ -0.22
ERCC3-209ENST00000494464 DEFB106AQ8N104 65 aa13.66□□□□□ -0.22
ERCC3-209ENST00000494464 DNAJC7Q99615 494 aa13.66□□□□□ -0.22
ERCC3-209ENST00000494464 SYNCQ9H7C4 482 aa13.66□□□□□ -0.22
ERCC3-209ENST00000494464 SIK3Q9Y2K2 1263 aa13.66□□□□□ -0.22
ERCC3-209ENST00000494464 NYNRINQ9P2P1 1898 aaKnown RBP13.65□□□□□ -0.22
ERCC3-209ENST00000494464 IGHV1OR15-9A0A0B4J2B8 117 aa13.65□□□□□ -0.22
ERCC3-209ENST00000494464 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.65□□□□□ -0.22
ERCC3-209ENST00000494464 C7P10643 843 aa13.65□□□□□ -0.22
ERCC3-209ENST00000494464 PRKCHP24723 683 aa13.65□□□□□ -0.22
ERCC3-209ENST00000494464 CCR1P32246 355 aa13.65□□□□□ -0.22
ERCC3-209ENST00000494464 NOS2P35228 1153 aa13.65□□□□□ -0.22
ERCC3-209ENST00000494464 DPP6P42658 865 aa13.65□□□□□ -0.22
ERCC3-209ENST00000494464 DHPSP49366 369 aaPredicted RBP13.65□□□□□ -0.22
ERCC3-209ENST00000494464 ATXN1P54253 815 aaKnown RBP13.65□□□□□ -0.22
ERCC3-209ENST00000494464 JAM2P57087 298 aa13.65□□□□□ -0.22
ERCC3-209ENST00000494464 RPS24P62847 133 aaKnown RBP13.65□□□□□ -0.22
ERCC3-209ENST00000494464 ARID5AQ03989 594 aa13.65□□□□□ -0.22
ERCC3-209ENST00000494464 CCDC6Q16204 474 aa13.65□□□□□ -0.22
ERCC3-209ENST00000494464 AASDHQ4L235 1098 aaPredicted RBP13.65□□□□□ -0.22
ERCC3-209ENST00000494464 NOP9Q86U38 636 aaKnown RBP13.65□□□□□ -0.22
ERCC3-209ENST00000494464 CHSY1Q86X52 802 aa13.65□□□□□ -0.22
ERCC3-209ENST00000494464 TMTC1Q8IUR5 882 aa13.65□□□□□ -0.22
ERCC3-209ENST00000494464 FRMD1Q8N878 549 aa13.65□□□□□ -0.22
ERCC3-209ENST00000494464 ATP6V0D2Q8N8Y2 350 aa13.65□□□□□ -0.22
ERCC3-209ENST00000494464 FIBINQ8TAL6 211 aa13.65□□□□□ -0.22
ERCC3-209ENST00000494464 SORCS1Q8WY21 1168 aa13.65□□□□□ -0.22
ERCC3-209ENST00000494464 MYEOVQ96EZ4 313 aa13.65□□□□□ -0.22
ERCC3-209ENST00000494464 LMLNQ96KR4 655 aa13.65□□□□□ -0.22
ERCC3-209ENST00000494464 PDCL3Q9H2J4 239 aa13.65□□□□□ -0.22
ERCC3-209ENST00000494464 TMEM245Q9H330 911 aa13.65□□□□□ -0.22
ERCC3-209ENST00000494464 DDIT4Q9NX09 232 aa13.65□□□□□ -0.22
ERCC3-209ENST00000494464 RRN3Q9NYV6 651 aa13.65□□□□□ -0.22
ERCC3-209ENST00000494464 XPO7Q9UIA9 1087 aaKnown RBP13.65□□□□□ -0.22
ERCC3-209ENST00000494464 LUC7L2Q9Y383 392 aaKnown RBP13.65□□□□□ -0.22
ERCC3-209ENST00000494464 KCNU1A8MYU2 1149 aa13.64□□□□□ -0.23
ERCC3-209ENST00000494464 MAP3K13O43283 966 aa13.64□□□□□ -0.23
ERCC3-209ENST00000494464 SYNCRIPO60506 623 aaKnown RBP13.64□□□□□ -0.23
ERCC3-209ENST00000494464 GRAP2O75791 330 aa13.64□□□□□ -0.23
ERCC3-209ENST00000494464 LUC7L3O95232 432 aaKnown RBP13.64□□□□□ -0.23
ERCC3-209ENST00000494464 ATP5BP06576 529 aaKnown RBP13.64□□□□□ -0.23
ERCC3-209ENST00000494464 DLDP09622 509 aaKnown RBP13.64□□□□□ -0.23
ERCC3-209ENST00000494464 CD70P32970 193 aa13.64□□□□□ -0.23
ERCC3-209ENST00000494464 HOXD12P35452 270 aa13.64□□□□□ -0.23
ERCC3-209ENST00000494464 MATKP42679 507 aa13.64□□□□□ -0.23
ERCC3-209ENST00000494464 KLK7P49862 253 aa13.64□□□□□ -0.23
ERCC3-209ENST00000494464 COPAP53621 1224 aa13.64□□□□□ -0.23
ERCC3-209ENST00000494464 POLR2FP61218 127 aaKnown RBP13.64□□□□□ -0.23
ERCC3-209ENST00000494464 NOMO3P69849 1222 aa13.64□□□□□ -0.23
ERCC3-209ENST00000494464 ZBED6P86452 979 aa13.64□□□□□ -0.23
ERCC3-209ENST00000494464 CAMK2GQ13555 558 aaPredicted RBP13.64□□□□□ -0.23
ERCC3-209ENST00000494464 CDH18Q13634 790 aa13.64□□□□□ -0.23
ERCC3-209ENST00000494464 PTPRNQ16849 979 aa13.64□□□□□ -0.23
ERCC3-209ENST00000494464 TTC39BQ5VTQ0 682 aaPredicted RBP13.64□□□□□ -0.23
ERCC3-209ENST00000494464 TAF3Q5VWG9 929 aa13.64□□□□□ -0.23
ERCC3-209ENST00000494464 PEAR1Q5VY43 1037 aaPredicted RBP13.64□□□□□ -0.23
ERCC3-209ENST00000494464 LYSMD4Q5XG99 296 aa13.64□□□□□ -0.23
ERCC3-209ENST00000494464 RAP1GAP2Q684P5 730 aa13.64□□□□□ -0.23
ERCC3-209ENST00000494464 MBLAC2Q68D91 279 aa13.64□□□□□ -0.23
ERCC3-209ENST00000494464 MSANTD4Q8NCY6 345 aa13.64□□□□□ -0.23
ERCC3-209ENST00000494464 OR8K1Q8NGG5 319 aa13.64□□□□□ -0.23
ERCC3-209ENST00000494464 CPLX3Q8WVH0 158 aa13.64□□□□□ -0.23
ERCC3-209ENST00000494464 C16orf45Q96MC5 204 aaPredicted RBP13.64□□□□□ -0.23
ERCC3-209ENST00000494464 PRMT1Q99873 361 aaKnown RBP13.64□□□□□ -0.23
ERCC3-209ENST00000494464 EDEM3Q9BZQ6 932 aa13.64□□□□□ -0.23
ERCC3-209ENST00000494464 MKRN2Q9H000 416 aaKnown RBP13.64□□□□□ -0.23
ERCC3-209ENST00000494464 SMOC1Q9H4F8 434 aa13.64□□□□□ -0.23
ERCC3-209ENST00000494464 FBRSQ9HAH7 460 aa13.64□□□□□ -0.23
ERCC3-209ENST00000494464 FAM207AQ9NSI2 230 aaPredicted RBP13.64□□□□□ -0.23
ERCC3-209ENST00000494464 STIM2Q9P246 746 aa13.64□□□□□ -0.23
ERCC3-209ENST00000494464 USP36Q9P275 1121 aaKnown RBP13.64□□□□□ -0.23
ERCC3-209ENST00000494464 SLC12A6Q9UHW9 1150 aa13.64□□□□□ -0.23
ERCC3-209ENST00000494464 NOCTQ9UK39 431 aaKnown RBP13.64□□□□□ -0.23
ERCC3-209ENST00000494464 PPP2R2CQ9Y2T4 447 aa13.64□□□□□ -0.23
ERCC3-209ENST00000494464 SDK1Q7Z5N4 2213 aa13.63□□□□□ -0.23
ERCC3-209ENST00000494464 LAMA1P25391 3075 aa13.63□□□□□ -0.23
ERCC3-209ENST00000494464 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms