RNA–Protein interactions for RNA: ENST00000494458.1

MSH5-217, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 520 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-217ENST00000494458 MKI67P46013 3256 aaKnown RBP7□□□□□ -1.29
MSH5-217ENST00000494458 ZNF638Q14966 1978 aaKnown RBP6.99□□□□□ -1.29
MSH5-217ENST00000494458 A0A0A0MRY4 1105 aa6.99□□□□□ -1.29
MSH5-217ENST00000494458 TCRBV7S3A2A0A539 114 aa6.99□□□□□ -1.29
MSH5-217ENST00000494458 SOBPA7XYQ1 873 aa6.99□□□□□ -1.29
MSH5-217ENST00000494458 GOLGA8KD6RF30 607 aa6.99□□□□□ -1.29
MSH5-217ENST00000494458 H7C0C1 242 aa6.99□□□□□ -1.29
MSH5-217ENST00000494458 PPP1R12AO14974 1030 aaPredicted RBP6.99□□□□□ -1.29
MSH5-217ENST00000494458 MTSS1O43312 755 aa6.99□□□□□ -1.29
MSH5-217ENST00000494458 OPHN1O60890 802 aa6.99□□□□□ -1.29
MSH5-217ENST00000494458 FAM155BO75949 473 aa6.99□□□□□ -1.29
MSH5-217ENST00000494458 TMEM63AO94886 807 aa6.99□□□□□ -1.29
MSH5-217ENST00000494458 SUN1O94901 812 aa6.99□□□□□ -1.29
MSH5-217ENST00000494458 METTL18O95568 372 aa6.99□□□□□ -1.29
MSH5-217ENST00000494458 TBX18O95935 607 aa6.99□□□□□ -1.29
MSH5-217ENST00000494458 PEX11BO96011 259 aa6.99□□□□□ -1.29
MSH5-217ENST00000494458 C1QAP02745 245 aa6.99□□□□□ -1.29
MSH5-217ENST00000494458 RB1P06400 928 aa6.99□□□□□ -1.29
MSH5-217ENST00000494458 POU2F2P09086 479 aa6.99□□□□□ -1.29
MSH5-217ENST00000494458 MLNP12872 115 aa6.99□□□□□ -1.29
MSH5-217ENST00000494458 RHOQP17081 205 aa6.99□□□□□ -1.29
MSH5-217ENST00000494458 PFKLP17858 780 aa6.99□□□□□ -1.29
MSH5-217ENST00000494458 CCNCP24863 283 aa6.99□□□□□ -1.29
MSH5-217ENST00000494458 SERPINB6P35237 376 aa6.99□□□□□ -1.29
MSH5-217ENST00000494458 GARSP41250 739 aaKnown RBP6.99□□□□□ -1.29
MSH5-217ENST00000494458 MAGEA4P43358 317 aa6.99□□□□□ -1.29
MSH5-217ENST00000494458 TNNT3P45378 269 aaPredicted RBP6.99□□□□□ -1.29
MSH5-217ENST00000494458 ATP5OP48047 213 aa6.99□□□□□ -1.29
MSH5-217ENST00000494458 IFNAR2P48551 515 aa6.99□□□□□ -1.29
MSH5-217ENST00000494458 TBX4P57082 545 aa6.99□□□□□ -1.29
MSH5-217ENST00000494458 TPI1P60174 286 aa6.99□□□□□ -1.29
MSH5-217ENST00000494458 IFI35P80217 286 aaPredicted RBP6.99□□□□□ -1.29
MSH5-217ENST00000494458 CAMK1Q14012 370 aa6.99□□□□□ -1.29
MSH5-217ENST00000494458 PARP6Q2NL67 630 aa6.99□□□□□ -1.29
MSH5-217ENST00000494458 TTMPQ5BVD1 217 aa6.99□□□□□ -1.29
MSH5-217ENST00000494458 MS4A13Q5J8X5 152 aa6.99□□□□□ -1.29
MSH5-217ENST00000494458 ANKRD20A2Q5SQ80 823 aa6.99□□□□□ -1.29
MSH5-217ENST00000494458 ANKRD20A1Q5TYW2 823 aa6.99□□□□□ -1.29
MSH5-217ENST00000494458 AGBL2Q5U5Z8 902 aa6.99□□□□□ -1.29
MSH5-217ENST00000494458 ANKRD20A3Q5VUR7 823 aa6.99□□□□□ -1.29
MSH5-217ENST00000494458 ANKRD22Q5VYY1 191 aa6.99□□□□□ -1.29
MSH5-217ENST00000494458 RNF43Q68DV7 783 aa6.99□□□□□ -1.29
MSH5-217ENST00000494458 KCTD11Q693B1 232 aa6.99□□□□□ -1.29
MSH5-217ENST00000494458 KIAA1841Q6NSI8 718 aa6.99□□□□□ -1.29
MSH5-217ENST00000494458 ZNF534Q76KX8 674 aa6.99□□□□□ -1.29
MSH5-217ENST00000494458 GSTA5Q7RTV2 222 aa6.99□□□□□ -1.29
MSH5-217ENST00000494458 DNAJB7Q7Z6W7 309 aaPredicted RBP6.99□□□□□ -1.29
MSH5-217ENST00000494458 C14orf80Q86SX3 495 aa6.99□□□□□ -1.29
MSH5-217ENST00000494458 ZC3H18Q86VM9 953 aaKnown RBP6.99□□□□□ -1.29
MSH5-217ENST00000494458 CAND1Q86VP6 1230 aaKnown RBP6.99□□□□□ -1.29
MSH5-217ENST00000494458 TDRPQ86YL5 185 aa6.99□□□□□ -1.29
MSH5-217ENST00000494458 TP53INP2Q8IXH6 220 aa6.99□□□□□ -1.29
MSH5-217ENST00000494458 NPWQ8N729 165 aa6.99□□□□□ -1.29
MSH5-217ENST00000494458 RTL3Q8N8U3 475 aaKnown RBP6.99□□□□□ -1.29
MSH5-217ENST00000494458 MRPL43Q8N983 215 aaKnown RBP6.99□□□□□ -1.29
MSH5-217ENST00000494458 KLHL23Q8NBE8 558 aa6.99□□□□□ -1.29
MSH5-217ENST00000494458 SPPL3Q8TCT6 385 aa6.99□□□□□ -1.29
MSH5-217ENST00000494458 SPOCK2Q92563 424 aa6.99□□□□□ -1.29
MSH5-217ENST00000494458 MAML1Q92585 1016 aa6.99□□□□□ -1.29
MSH5-217ENST00000494458 ARL8AQ96BM9 186 aa6.99□□□□□ -1.29
MSH5-217ENST00000494458 TLCD1Q96CP7 247 aa6.99□□□□□ -1.29
MSH5-217ENST00000494458 LRRC39Q96DD0 335 aa6.99□□□□□ -1.29
MSH5-217ENST00000494458 P2RY11Q96G91 374 aa6.99□□□□□ -1.29
MSH5-217ENST00000494458 ZFRQ96KR1 1074 aaKnown RBP6.99□□□□□ -1.29
MSH5-217ENST00000494458 SPATA13Q96N96 652 aa6.99□□□□□ -1.29
MSH5-217ENST00000494458 KLHL5Q96PQ7 755 aa6.99□□□□□ -1.29
MSH5-217ENST00000494458 RBM15Q96T37 977 aaKnown RBP eCLIP6.99□□□□□ -1.299e-7■■□□□ 13.6
MSH5-217ENST00000494458 YME1L1Q96TA2 773 aa6.99□□□□□ -1.29
MSH5-217ENST00000494458 LGMNQ99538 433 aa6.99□□□□□ -1.29
MSH5-217ENST00000494458 GORASP1Q9BQQ3 440 aa6.99□□□□□ -1.29
MSH5-217ENST00000494458 KLF16Q9BXK1 252 aaPredicted RBP6.99□□□□□ -1.29
MSH5-217ENST00000494458 NOL6Q9H6R4 1146 aaKnown RBP6.99□□□□□ -1.29
MSH5-217ENST00000494458 ETNK1Q9HBU6 452 aa6.99□□□□□ -1.29
MSH5-217ENST00000494458 TMEM248Q9NWD8 314 aa6.99□□□□□ -1.29
MSH5-217ENST00000494458 NINJ2Q9NZG7 142 aa6.99□□□□□ -1.29
MSH5-217ENST00000494458 MARCH2Q9P0N8 246 aa6.99□□□□□ -1.29
MSH5-217ENST00000494458 TRHDEQ9UKU6 1024 aa6.99□□□□□ -1.29
MSH5-217ENST00000494458 ATP8A1Q9Y2Q0 1164 aa6.99□□□□□ -1.29
MSH5-217ENST00000494458 RWDD3Q9Y3V2 267 aa6.99□□□□□ -1.29
MSH5-217ENST00000494458 YIPF1Q9Y548 306 aa6.99□□□□□ -1.29
MSH5-217ENST00000494458 HEY1Q9Y5J3 304 aa6.99□□□□□ -1.29
MSH5-217ENST00000494458 TEX264Q9Y6I9 313 aa6.99□□□□□ -1.29
MSH5-217ENST00000494458 HMGB1P1B2RPK0 211 aaPredicted RBP6.98□□□□□ -1.29
MSH5-217ENST00000494458 E7EVH7 732 aa6.98□□□□□ -1.29
MSH5-217ENST00000494458 E9PAM4 449 aa6.98□□□□□ -1.29
MSH5-217ENST00000494458 ARHGAP33O14559 1287 aa6.98□□□□□ -1.29
MSH5-217ENST00000494458 KCNN4O15554 427 aa6.98□□□□□ -1.29
MSH5-217ENST00000494458 MSI1O43347 362 aaKnown RBP6.98□□□□□ -1.29
MSH5-217ENST00000494458 TGM5O43548 720 aa6.98□□□□□ -1.29
MSH5-217ENST00000494458 CREB3O43889 395 aa6.98□□□□□ -1.29
MSH5-217ENST00000494458 TLR5O60602 858 aa6.98□□□□□ -1.29
MSH5-217ENST00000494458 MAFKO60675 156 aa6.98□□□□□ -1.29
MSH5-217ENST00000494458 RNF40O75150 1001 aa6.98□□□□□ -1.29
MSH5-217ENST00000494458 LATS1O95835 1130 aa6.98□□□□□ -1.29
MSH5-217ENST00000494458 IFNB1P01574 187 aa6.98□□□□□ -1.29
MSH5-217ENST00000494458 URODP06132 367 aa6.98□□□□□ -1.29
MSH5-217ENST00000494458 CNPP09543 421 aaKnown RBP6.98□□□□□ -1.29
MSH5-217ENST00000494458 PTPN3P26045 913 aa6.98□□□□□ -1.29
MSH5-217ENST00000494458 EPHB2P29323 1055 aa6.98□□□□□ -1.29
MSH5-217ENST00000494458 OAS2P29728 719 aaKnown RBP6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms