RNA–Protein interactions for RNA: ENST00000494323.5

PTCD3-219, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 540 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-219ENST00000494323 MLH1P40692 756 aa5.68□□□□□ -1.5
PTCD3-219ENST00000494323 GLUD2P49448 558 aa5.68□□□□□ -1.5
PTCD3-219ENST00000494323 GPR15P49685 360 aa5.68□□□□□ -1.5
PTCD3-219ENST00000494323 SCNN1GP51170 649 aa5.68□□□□□ -1.5
PTCD3-219ENST00000494323 GPC5P78333 572 aa5.68□□□□□ -1.5
PTCD3-219ENST00000494323 NTHL1P78549 312 aa5.68□□□□□ -1.5
PTCD3-219ENST00000494323 CYP4A11Q02928 519 aa5.68□□□□□ -1.5
PTCD3-219ENST00000494323 GTF2H3Q13889 308 aa5.68□□□□□ -1.5
PTCD3-219ENST00000494323 CTTNQ14247 550 aaKnown RBP5.68□□□□□ -1.5
PTCD3-219ENST00000494323 GBX1Q14549 363 aa5.68□□□□□ -1.5
PTCD3-219ENST00000494323 NONOQ15233 471 aaKnown RBP eCLIP5.68□□□□□ -1.5
PTCD3-219ENST00000494323 NPY5RQ15761 445 aa5.68□□□□□ -1.5
PTCD3-219ENST00000494323 TMEM200BQ69YZ2 307 aa5.68□□□□□ -1.5
PTCD3-219ENST00000494323 DCLRE1AQ6PJP8 1040 aa5.68□□□□□ -1.5
PTCD3-219ENST00000494323 PRSS55Q6UWB4 352 aaPredicted RBP5.68□□□□□ -1.5
PTCD3-219ENST00000494323 PARM1Q6UWI2 310 aa5.68□□□□□ -1.5
PTCD3-219ENST00000494323 UNQ6494/PRO21346Q6UXR6 183 aa5.68□□□□□ -1.5
PTCD3-219ENST00000494323 DGLUCYQ7Z3D6 616 aa5.68□□□□□ -1.5
PTCD3-219ENST00000494323 C1orf210Q8IVY1 113 aa5.68□□□□□ -1.5
PTCD3-219ENST00000494323 OR5AN1Q8NGI8 311 aa5.68□□□□□ -1.5
PTCD3-219ENST00000494323 PSPC1Q8WXF1 523 aaKnown RBP5.68□□□□□ -1.5
PTCD3-219ENST00000494323 ZCCHC14Q8WYQ9 949 aaKnown RBP5.68□□□□□ -1.5
PTCD3-219ENST00000494323 STAMQ92783 540 aa5.68□□□□□ -1.5
PTCD3-219ENST00000494323 HAS1Q92839 578 aa5.68□□□□□ -1.5
PTCD3-219ENST00000494323 PMM1Q92871 262 aa5.68□□□□□ -1.5
PTCD3-219ENST00000494323 DYDC2Q96IM9 177 aa5.68□□□□□ -1.5
PTCD3-219ENST00000494323 JPH2Q9BR39 696 aaPredicted RBP5.68□□□□□ -1.5
PTCD3-219ENST00000494323 COLEC11Q9BWP8 271 aa5.68□□□□□ -1.5
PTCD3-219ENST00000494323 DHX33Q9H6R0 707 aaKnown RBP5.68□□□□□ -1.5
PTCD3-219ENST00000494323 GJB4Q9NTQ9 266 aa5.68□□□□□ -1.5
PTCD3-219ENST00000494323 EPS15L1Q9UBC2 864 aa5.68□□□□□ -1.5
PTCD3-219ENST00000494323 EDARQ9UNE0 448 aa5.68□□□□□ -1.5
PTCD3-219ENST00000494323 SSX2IPQ9Y2D8 614 aa5.68□□□□□ -1.5
PTCD3-219ENST00000494323 MTF2Q9Y483 593 aaPredicted RBP5.68□□□□□ -1.5
PTCD3-219ENST00000494323 CLUHO75153 1309 aa5.68□□□□□ -1.5
PTCD3-219ENST00000494323 TDRD15B5MCY1 1934 aaKnown RBP5.68□□□□□ -1.5
PTCD3-219ENST00000494323 CACNA1AO00555 2505 aa5.68□□□□□ -1.5
PTCD3-219ENST00000494323 F5P12259 2224 aa5.67□□□□□ -1.5
PTCD3-219ENST00000494323 DENND4AQ7Z401 1863 aa5.67□□□□□ -1.5
PTCD3-219ENST00000494323 A0A0G2JNJ9 132 aa5.67□□□□□ -1.5
PTCD3-219ENST00000494323 CPLX1O14810 134 aa5.67□□□□□ -1.5
PTCD3-219ENST00000494323 ASAP2O43150 1006 aa5.67□□□□□ -1.5
PTCD3-219ENST00000494323 B4GALT5O43286 388 aa5.67□□□□□ -1.5
PTCD3-219ENST00000494323 CCNT1O60563 726 aaKnown RBP5.67□□□□□ -1.5
PTCD3-219ENST00000494323 TSPAN1O60635 241 aa5.67□□□□□ -1.5
PTCD3-219ENST00000494323 TADA2AO75478 443 aa5.67□□□□□ -1.5
PTCD3-219ENST00000494323 KLHL18O94889 574 aa5.67□□□□□ -1.5
PTCD3-219ENST00000494323 ERLIN2O94905 339 aa5.67□□□□□ -1.5
PTCD3-219ENST00000494323 SLITRK3O94933 977 aa5.67□□□□□ -1.5
PTCD3-219ENST00000494323 PCDH8O95206 1070 aa5.67□□□□□ -1.5
PTCD3-219ENST00000494323 IL33O95760 270 aa5.67□□□□□ -1.5
PTCD3-219ENST00000494323 KRT18P05783 430 aaKnown RBP5.67□□□□□ -1.5
PTCD3-219ENST00000494323 LPLP06858 475 aa5.67□□□□□ -1.5
PTCD3-219ENST00000494323 CELA3BP08861 270 aa5.67□□□□□ -1.5
PTCD3-219ENST00000494323 ARF4P18085 180 aaPredicted RBP5.67□□□□□ -1.5
PTCD3-219ENST00000494323 CD72P21854 359 aa5.67□□□□□ -1.5
PTCD3-219ENST00000494323 PSMA5P28066 241 aa5.67□□□□□ -1.5
PTCD3-219ENST00000494323 EVCP57679 992 aa5.67□□□□□ -1.5
PTCD3-219ENST00000494323 PTENP60484 403 aa5.67□□□□□ -1.5
PTCD3-219ENST00000494323 DSC1Q08554 894 aa5.67□□□□□ -1.5
PTCD3-219ENST00000494323 NCBP1Q09161 790 aaKnown RBP5.67□□□□□ -1.5
PTCD3-219ENST00000494323 PPP2R5CQ13362 524 aa5.67□□□□□ -1.5
PTCD3-219ENST00000494323 TOB2Q14106 344 aaPredicted RBP5.67□□□□□ -1.5
PTCD3-219ENST00000494323 TRIM25Q14258 630 aaKnown RBP5.67□□□□□ -1.5
PTCD3-219ENST00000494323 GRM3Q14832 879 aa5.67□□□□□ -1.5
PTCD3-219ENST00000494323 EMC2Q15006 297 aa5.67□□□□□ -1.5
PTCD3-219ENST00000494323 ACAP2Q15057 778 aa5.67□□□□□ -1.5
PTCD3-219ENST00000494323 VMACQ2NL98 169 aa5.67□□□□□ -1.5
PTCD3-219ENST00000494323 MUM1Q2TAK8 710 aa5.67□□□□□ -1.5
PTCD3-219ENST00000494323 USP41Q3LFD5 358 aa5.67□□□□□ -1.5
PTCD3-219ENST00000494323 MINDY4Q4G0A6 757 aa5.67□□□□□ -1.5
PTCD3-219ENST00000494323 NCAPH2Q6IBW4 605 aa5.67□□□□□ -1.5
PTCD3-219ENST00000494323 NOTUMQ6P988 496 aa5.67□□□□□ -1.5
PTCD3-219ENST00000494323 GET4Q7L5D6 327 aaPredicted RBP5.67□□□□□ -1.5
PTCD3-219ENST00000494323 OTUD6AQ7L8S5 288 aa5.67□□□□□ -1.5
PTCD3-219ENST00000494323 GRASPQ7Z6J2 395 aaPredicted RBP5.67□□□□□ -1.5
PTCD3-219ENST00000494323 CEP57Q86XR8 500 aa5.67□□□□□ -1.5
PTCD3-219ENST00000494323 EXOC8Q8IYI6 725 aa5.67□□□□□ -1.5
PTCD3-219ENST00000494323 RNF168Q8IYW5 571 aaPredicted RBP5.67□□□□□ -1.5
PTCD3-219ENST00000494323 FBXL16Q8N461 479 aa5.67□□□□□ -1.5
PTCD3-219ENST00000494323 CDYL2Q8N8U2 506 aa5.67□□□□□ -1.5
PTCD3-219ENST00000494323 CMASQ8NFW8 434 aaPredicted RBP5.67□□□□□ -1.5
PTCD3-219ENST00000494323 HASPINQ8TF76 798 aa5.67□□□□□ -1.5
PTCD3-219ENST00000494323 TSPEARQ8WU66 669 aa5.67□□□□□ -1.5
PTCD3-219ENST00000494323 RSPH1Q8WYR4 309 aa5.67□□□□□ -1.5
PTCD3-219ENST00000494323 FGF14Q92915 247 aa5.67□□□□□ -1.5
PTCD3-219ENST00000494323 CLIP3Q96DZ5 547 aa5.67□□□□□ -1.5
PTCD3-219ENST00000494323 HIST1H2AHQ96KK5 128 aa5.67□□□□□ -1.5
PTCD3-219ENST00000494323 C20orf173Q96LM9 149 aa5.67□□□□□ -1.5
PTCD3-219ENST00000494323 MBOAT7Q96N66 472 aa5.67□□□□□ -1.5
PTCD3-219ENST00000494323 HIST1H2AJQ99878 128 aa5.67□□□□□ -1.5
PTCD3-219ENST00000494323 PAAF1Q9BRP4 392 aa5.67□□□□□ -1.5
PTCD3-219ENST00000494323 LXNQ9BS40 222 aa5.67□□□□□ -1.5
PTCD3-219ENST00000494323 HERC2P3Q9BVR0 1158 aa5.67□□□□□ -1.5
PTCD3-219ENST00000494323 AGXT2Q9BYV1 514 aa5.67□□□□□ -1.5
PTCD3-219ENST00000494323 C22orf23Q9BZE7 217 aa5.67□□□□□ -1.5
PTCD3-219ENST00000494323 CSRNP2Q9H175 543 aa5.67□□□□□ -1.5
PTCD3-219ENST00000494323 CXCL16Q9H2A7 254 aa5.67□□□□□ -1.5
PTCD3-219ENST00000494323 KCTD10Q9H3F6 313 aa5.67□□□□□ -1.5
PTCD3-219ENST00000494323 NXF3Q9H4D5 531 aaKnown RBP5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms