RNA–Protein interactions for RNA: ENST00000494132.1

ATG4B-224, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 828 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-224ENST00000494132 C14orf80Q86SX3 495 aa15.2■□□□□ 0.02
ATG4B-224ENST00000494132 TMEFF1Q8IYR6 380 aa15.2■□□□□ 0.02
ATG4B-224ENST00000494132 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.2■□□□□ 0.02
ATG4B-224ENST00000494132 JOSD2Q8TAC2 188 aa15.2■□□□□ 0.02
ATG4B-224ENST00000494132 FIBINQ8TAL6 211 aa15.2■□□□□ 0.02
ATG4B-224ENST00000494132 WFIKKN2Q8TEU8 576 aa15.2■□□□□ 0.02
ATG4B-224ENST00000494132 BAP1Q92560 729 aa15.2■□□□□ 0.02
ATG4B-224ENST00000494132 IGSF8Q969P0 613 aa15.2■□□□□ 0.02
ATG4B-224ENST00000494132 ZC3H10Q96K80 434 aaKnown RBP15.2■□□□□ 0.02
ATG4B-224ENST00000494132 LMLNQ96KR4 655 aa15.2■□□□□ 0.02
ATG4B-224ENST00000494132 SPACA7Q96KW9 195 aa15.2■□□□□ 0.02
ATG4B-224ENST00000494132 MRGPRX1Q96LB2 322 aa15.2■□□□□ 0.02
ATG4B-224ENST00000494132 AGPAT1Q99943 283 aa15.2■□□□□ 0.02
ATG4B-224ENST00000494132 MKRN2Q9H000 416 aaKnown RBP15.2■□□□□ 0.02
ATG4B-224ENST00000494132 TKTL2Q9H0I9 626 aa15.2■□□□□ 0.02
ATG4B-224ENST00000494132 MTG2Q9H4K7 406 aa15.2■□□□□ 0.02
ATG4B-224ENST00000494132 SLC12A6Q9UHW9 1150 aa15.2■□□□□ 0.02
ATG4B-224ENST00000494132 HS3ST4Q9Y661 456 aa15.2■□□□□ 0.02
ATG4B-224ENST00000494132 FRYLO94915 3013 aa15.19■□□□□ 0.02
ATG4B-224ENST00000494132 MAP3K13O43283 966 aa15.19■□□□□ 0.02
ATG4B-224ENST00000494132 RHOBTB1O94844 696 aa15.19■□□□□ 0.02
ATG4B-224ENST00000494132 SLC2A3P11169 496 aa15.19■□□□□ 0.02
ATG4B-224ENST00000494132 POLR2EP19388 210 aaKnown RBP15.19■□□□□ 0.02
ATG4B-224ENST00000494132 CSKP41240 450 aa15.19■□□□□ 0.02
ATG4B-224ENST00000494132 CTSOP43234 321 aaPredicted RBP15.19■□□□□ 0.02
ATG4B-224ENST00000494132 NSFP46459 744 aaKnown RBP15.19■□□□□ 0.02
ATG4B-224ENST00000494132 ATP11AP98196 1134 aa15.19■□□□□ 0.02
ATG4B-224ENST00000494132 FANCCQ00597 558 aa15.19■□□□□ 0.02
ATG4B-224ENST00000494132 ENPP2Q13822 863 aa15.19■□□□□ 0.02
ATG4B-224ENST00000494132 AUHQ13825 339 aaKnown RBP15.19■□□□□ 0.02
ATG4B-224ENST00000494132 CDO1Q16878 200 aa15.19■□□□□ 0.02
ATG4B-224ENST00000494132 CLEC16AQ2KHT3 1053 aa15.19■□□□□ 0.02
ATG4B-224ENST00000494132 C15orf59Q2T9L4 293 aaPredicted RBP15.19■□□□□ 0.02
ATG4B-224ENST00000494132 E4F1Q66K89 784 aaPredicted RBP15.19■□□□□ 0.02
ATG4B-224ENST00000494132 TCEAL6Q6IPX3 200 aa15.19■□□□□ 0.02
ATG4B-224ENST00000494132 KIAA0907Q7Z7F0 614 aaPredicted RBP15.19■□□□□ 0.02
ATG4B-224ENST00000494132 CCDC117Q8IWD4 279 aaPredicted RBP15.19■□□□□ 0.02
ATG4B-224ENST00000494132 APCDD1Q8J025 514 aa15.19■□□□□ 0.02
ATG4B-224ENST00000494132 CCAR2Q8N163 923 aaKnown RBP15.19■□□□□ 0.02
ATG4B-224ENST00000494132 TCEAL3Q969E4 200 aa15.19■□□□□ 0.02
ATG4B-224ENST00000494132 RMDN1Q96DB5 314 aa15.19■□□□□ 0.02
ATG4B-224ENST00000494132 RPRD1AQ96P16 312 aaPredicted RBP15.19■□□□□ 0.02
ATG4B-224ENST00000494132 WDCPQ9H6R7 721 aa15.19■□□□□ 0.02
ATG4B-224ENST00000494132 TMEM59LQ9UK28 342 aa15.19■□□□□ 0.02
ATG4B-224ENST00000494132 WDR87Q6ZQQ6 2873 aa15.18■□□□□ 0.02
ATG4B-224ENST00000494132 ATXN2Q99700 1313 aaKnown RBP15.18■□□□□ 0.02
ATG4B-224ENST00000494132 ZBTB24O43167 697 aaPredicted RBP15.18■□□□□ 0.02
ATG4B-224ENST00000494132 GDF9O60383 454 aa15.18■□□□□ 0.02
ATG4B-224ENST00000494132 SYNCRIPO60506 623 aaKnown RBP15.18■□□□□ 0.02
ATG4B-224ENST00000494132 FERP16591 822 aa15.18■□□□□ 0.02
ATG4B-224ENST00000494132 PTMSP20962 102 aa15.18■□□□□ 0.02
ATG4B-224ENST00000494132 SCNN1AP37088 669 aa15.18■□□□□ 0.02
ATG4B-224ENST00000494132 MPLP40238 635 aa15.18■□□□□ 0.02
ATG4B-224ENST00000494132 CXCR3P49682 368 aa15.18■□□□□ 0.02
ATG4B-224ENST00000494132 PTP4A2Q12974 167 aa15.18■□□□□ 0.02
ATG4B-224ENST00000494132 SLC25A52Q3SY17 297 aa15.18■□□□□ 0.02
ATG4B-224ENST00000494132 PITRM1Q5JRX3 1037 aa15.18■□□□□ 0.02
ATG4B-224ENST00000494132 SH3PXD2AQ5TCZ1 1133 aa15.18■□□□□ 0.02
ATG4B-224ENST00000494132 TRIM72Q6ZMU5 477 aa15.18■□□□□ 0.02
ATG4B-224ENST00000494132 PRR23CQ6ZRP0 262 aa15.18■□□□□ 0.02
ATG4B-224ENST00000494132 FAM131BQ86XD5 332 aa15.18■□□□□ 0.02
ATG4B-224ENST00000494132 DNAAF5Q86Y56 855 aa15.18■□□□□ 0.02
ATG4B-224ENST00000494132 NT5C3BQ969T7 300 aa15.18■□□□□ 0.02
ATG4B-224ENST00000494132 IRX2Q9BZI1 471 aaPredicted RBP15.18■□□□□ 0.02
ATG4B-224ENST00000494132 PRDM16Q9HAZ2 1276 aa15.18■□□□□ 0.02
ATG4B-224ENST00000494132 RRN3Q9NYV6 651 aa15.18■□□□□ 0.02
ATG4B-224ENST00000494132 ADAM22Q9P0K1 906 aa15.18■□□□□ 0.02
ATG4B-224ENST00000494132 PLA2G4CQ9UP65 541 aa15.18■□□□□ 0.02
ATG4B-224ENST00000494132 IGHV1OR15-9A0A0B4J2B8 117 aa15.17■□□□□ 0.02
ATG4B-224ENST00000494132 TMCO5BA8MYB1 307 aa15.17■□□□□ 0.02
ATG4B-224ENST00000494132 NPC1O15118 1278 aa15.17■□□□□ 0.02
ATG4B-224ENST00000494132 TIMM44O43615 452 aa15.17■□□□□ 0.02
ATG4B-224ENST00000494132 DLDP09622 509 aaKnown RBP15.17■□□□□ 0.02
ATG4B-224ENST00000494132 PDGFRAP16234 1089 aa15.17■□□□□ 0.02
ATG4B-224ENST00000494132 MZF1P28698 734 aaPredicted RBP15.17■□□□□ 0.02
ATG4B-224ENST00000494132 PTGER3P43115 390 aa15.17■□□□□ 0.02
ATG4B-224ENST00000494132 COPAP53621 1224 aa15.17■□□□□ 0.02
ATG4B-224ENST00000494132 TPM4P67936 248 aa15.17■□□□□ 0.02
ATG4B-224ENST00000494132 RPL6Q02878 288 aaKnown RBP15.17■□□□□ 0.02
ATG4B-224ENST00000494132 NR1I3Q14994 352 aa15.17■□□□□ 0.02
ATG4B-224ENST00000494132 CSRP2Q16527 193 aa15.17■□□□□ 0.02
ATG4B-224ENST00000494132 RSPO4Q2I0M5 234 aaPredicted RBP15.17■□□□□ 0.02
ATG4B-224ENST00000494132 RABGAP1LQ5R372 815 aa15.17■□□□□ 0.02
ATG4B-224ENST00000494132 SND1Q7KZF4 910 aaKnown RBP eCLIP15.17■□□□□ 0.02
ATG4B-224ENST00000494132 IRF2BP2Q7Z5L9 587 aa15.17■□□□□ 0.02
ATG4B-224ENST00000494132 TMPRSS6Q8IU80 811 aa15.17■□□□□ 0.02
ATG4B-224ENST00000494132 OR52K2Q8NGK3 314 aa15.17■□□□□ 0.02
ATG4B-224ENST00000494132 RXFP2Q8WXD0 754 aa15.17■□□□□ 0.02
ATG4B-224ENST00000494132 MYO19Q96H55 970 aa15.17■□□□□ 0.02
ATG4B-224ENST00000494132 LOXL4Q96JB6 756 aa15.17■□□□□ 0.02
ATG4B-224ENST00000494132 TMEM245Q9H330 911 aa15.17■□□□□ 0.02
ATG4B-224ENST00000494132 RXFP3Q9NSD7 469 aa15.17■□□□□ 0.02
ATG4B-224ENST00000494132 ARHGEF38Q9NXL2 777 aa15.17■□□□□ 0.02
ATG4B-224ENST00000494132 TAS2R14Q9NYV8 317 aa15.17■□□□□ 0.02
ATG4B-224ENST00000494132 DOCK9Q9BZ29 2069 aa15.16■□□□□ 0.02
ATG4B-224ENST00000494132 TP53BP1Q12888 1972 aaPredicted RBP15.16■□□□□ 0.02
ATG4B-224ENST00000494132 LOC105378220A0A1B0GUY1 285 aaPredicted RBP15.16■□□□□ 0.02
ATG4B-224ENST00000494132 A0A1B0GVM2 712 aa15.16■□□□□ 0.02
ATG4B-224ENST00000494132 A0A1W2PQC6 194 aa15.16■□□□□ 0.02
ATG4B-224ENST00000494132 TCAF2A6NFQ2 919 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms