RNA–Protein interactions for RNA: ENST00000493945.5

ACTB-213, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 1,236 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-213ENST00000493945 ZNF783Q6ZMS7 281 aa15.37■□□□□ 0.05
ACTB-213ENST00000493945 SETD3Q86TU7 594 aaPredicted RBP15.37■□□□□ 0.05
ACTB-213ENST00000493945 UBALD2Q8IYN6 164 aa15.37■□□□□ 0.05
ACTB-213ENST00000493945 SLC44A3Q8N4M1 653 aa15.37■□□□□ 0.05
ACTB-213ENST00000493945 RSPRY1Q96DX4 576 aa15.37■□□□□ 0.05
ACTB-213ENST00000493945 PBKQ96KB5 322 aa15.37■□□□□ 0.05
ACTB-213ENST00000493945 KCTD15Q96SI1 283 aaPredicted RBP15.37■□□□□ 0.05
ACTB-213ENST00000493945 FERMT1Q9BQL6 677 aa15.37■□□□□ 0.05
ACTB-213ENST00000493945 EBF3Q9H4W6 596 aa15.37■□□□□ 0.05
ACTB-213ENST00000493945 SLC2A4RGQ9NR83 387 aa15.37■□□□□ 0.05
ACTB-213ENST00000493945 GPATCH2LQ9NWQ4 482 aa15.37■□□□□ 0.05
ACTB-213ENST00000493945 XPO7Q9UIA9 1087 aaKnown RBP15.37■□□□□ 0.05
ACTB-213ENST00000493945 DUSP12Q9UNI6 340 aa15.37■□□□□ 0.05
ACTB-213ENST00000493945 EFR3BQ9Y2G0 817 aa15.37■□□□□ 0.05
ACTB-213ENST00000493945 KCNK3O14649 394 aa15.36■□□□□ 0.05
ACTB-213ENST00000493945 SCAMP3O14828 347 aaKnown RBP15.36■□□□□ 0.05
ACTB-213ENST00000493945 TSPAN3O60637 253 aa15.36■□□□□ 0.05
ACTB-213ENST00000493945 TJP3O95049 919 aa15.36■□□□□ 0.05
ACTB-213ENST00000493945 CYP17A1P05093 508 aa15.36■□□□□ 0.05
ACTB-213ENST00000493945 TYRP14679 529 aa15.36■□□□□ 0.05
ACTB-213ENST00000493945 OR1E1P30953 314 aa15.36■□□□□ 0.05
ACTB-213ENST00000493945 HOXC13P31276 330 aa15.36■□□□□ 0.05
ACTB-213ENST00000493945 SLC6A4P31645 630 aa15.36■□□□□ 0.05
ACTB-213ENST00000493945 PTPN7P35236 360 aa15.36■□□□□ 0.05
ACTB-213ENST00000493945 VCPP55072 806 aaKnown RBP15.36■□□□□ 0.05
ACTB-213ENST00000493945 SEMA3BQ13214 749 aa15.36■□□□□ 0.05
ACTB-213ENST00000493945 DPYSL3Q14195 570 aa15.36■□□□□ 0.05
ACTB-213ENST00000493945 RAB6CQ53S08 254 aa15.36■□□□□ 0.05
ACTB-213ENST00000493945 MANEALQ5VSG8 457 aa15.36■□□□□ 0.05
ACTB-213ENST00000493945 CYP4V2Q6ZWL3 525 aaPredicted RBP15.36■□□□□ 0.05
ACTB-213ENST00000493945 RFX6Q8HWS3 928 aa15.36■□□□□ 0.05
ACTB-213ENST00000493945 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.36■□□□□ 0.052e-19■■□□□ 11.4
ACTB-213ENST00000493945 ADGRG2Q8IZP9 1017 aa15.36■□□□□ 0.05
ACTB-213ENST00000493945 RTL3Q8N8U3 475 aaKnown RBP15.36■□□□□ 0.05
ACTB-213ENST00000493945 FAM71BQ8TC56 605 aa15.36■□□□□ 0.05
ACTB-213ENST00000493945 SHDQ96IW2 340 aa15.36■□□□□ 0.05
ACTB-213ENST00000493945 C16orf45Q96MC5 204 aaPredicted RBP15.36■□□□□ 0.05
ACTB-213ENST00000493945 CSPG4P5Q96PW8 444 aa15.36■□□□□ 0.05
ACTB-213ENST00000493945 RAB6CQ9H0N0 254 aa15.36■□□□□ 0.05
ACTB-213ENST00000493945 KLHL11Q9NVR0 708 aa15.36■□□□□ 0.05
ACTB-213ENST00000493945 HAUS2Q9NVX0 235 aa15.36■□□□□ 0.05
ACTB-213ENST00000493945 TMEM248Q9NWD8 314 aa15.36■□□□□ 0.05
ACTB-213ENST00000493945 RAD54BQ9Y620 910 aa15.36■□□□□ 0.05
ACTB-213ENST00000493945 TICRRQ7Z2Z1 1910 aa15.35■□□□□ 0.05
ACTB-213ENST00000493945 GOLGA6L7A0A1B0GV03 622 aa15.35■□□□□ 0.05
ACTB-213ENST00000493945 C19orf67A6NJJ6 358 aa15.35■□□□□ 0.05
ACTB-213ENST00000493945 DRGXA6NNA5 263 aa15.35■□□□□ 0.05
ACTB-213ENST00000493945 WASH4PA8MWX3 477 aa15.35■□□□□ 0.05
ACTB-213ENST00000493945 CES2O00748 559 aa15.35■□□□□ 0.05
ACTB-213ENST00000493945 APOL1O14791 398 aa15.35■□□□□ 0.05
ACTB-213ENST00000493945 CACNG3O60359 315 aa15.35■□□□□ 0.05
ACTB-213ENST00000493945 PENKP01210 267 aaPredicted RBP15.35■□□□□ 0.05
ACTB-213ENST00000493945 RHOCP08134 193 aa15.35■□□□□ 0.05
ACTB-213ENST00000493945 TCF4P15884 667 aa15.35■□□□□ 0.05
ACTB-213ENST00000493945 GOT1P17174 413 aa15.35■□□□□ 0.05
ACTB-213ENST00000493945 TRIM68Q6AZZ1 485 aa15.35■□□□□ 0.05
ACTB-213ENST00000493945 SPOCD1Q6ZMY3 1216 aa15.35■□□□□ 0.05
ACTB-213ENST00000493945 RALGPS2Q86X27 583 aaPredicted RBP15.35■□□□□ 0.05
ACTB-213ENST00000493945 GJD3Q8N144 294 aa15.35■□□□□ 0.05
ACTB-213ENST00000493945 CARNMT1Q8N4J0 409 aa15.35■□□□□ 0.05
ACTB-213ENST00000493945 TTC13Q8NBP0 860 aa15.35■□□□□ 0.05
ACTB-213ENST00000493945 WFIKKN2Q8TEU8 576 aa15.35■□□□□ 0.05
ACTB-213ENST00000493945 KRT35Q92764 455 aa15.35■□□□□ 0.05
ACTB-213ENST00000493945 WBP2Q969T9 261 aa15.35■□□□□ 0.05
ACTB-213ENST00000493945 RNF25Q96BH1 459 aaPredicted RBP15.35■□□□□ 0.05
ACTB-213ENST00000493945 ZFYVE19Q96K21 471 aa15.35■□□□□ 0.05
ACTB-213ENST00000493945 PRICKLE1Q96MT3 831 aaPredicted RBP15.35■□□□□ 0.05
ACTB-213ENST00000493945 PLA2G2FQ9BZM2 168 aa15.35■□□□□ 0.05
ACTB-213ENST00000493945 KIAA1522Q9P206 1035 aaPredicted RBP15.35■□□□□ 0.05
ACTB-213ENST00000493945 DEC1Q9P2X7 70 aa15.35■□□□□ 0.05
ACTB-213ENST00000493945 HPCAL4Q9UM19 191 aa15.35■□□□□ 0.05
ACTB-213ENST00000493945 PACSIN2Q9UNF0 486 aaPredicted RBP15.35■□□□□ 0.05
ACTB-213ENST00000493945 MYO10Q9HD67 2058 aa15.34■□□□□ 0.05
ACTB-213ENST00000493945 ARHGAP42A6NI28 874 aa15.34■□□□□ 0.05
ACTB-213ENST00000493945 MAN2B1O00754 1011 aa15.34■□□□□ 0.05
ACTB-213ENST00000493945 NCAM2O15394 837 aa15.34■□□□□ 0.05
ACTB-213ENST00000493945 RAMP2O60895 175 aa15.34■□□□□ 0.05
ACTB-213ENST00000493945 ASGR2P07307 311 aa15.34■□□□□ 0.05
ACTB-213ENST00000493945 BMP1P13497 986 aa15.34■□□□□ 0.05
ACTB-213ENST00000493945 ARSAP15289 507 aa15.34■□□□□ 0.05
ACTB-213ENST00000493945 MX2P20592 715 aa15.34■□□□□ 0.05
ACTB-213ENST00000493945 TGM2P21980 687 aa15.34■□□□□ 0.05
ACTB-213ENST00000493945 GGCXP38435 758 aa15.34■□□□□ 0.05
ACTB-213ENST00000493945 DGKGP49619 791 aa15.34■□□□□ 0.05
ACTB-213ENST00000493945 GEMIN4P57678 1058 aaKnown RBP15.34■□□□□ 0.05
ACTB-213ENST00000493945 YBEYP58557 167 aaPredicted RBP15.34■□□□□ 0.05
ACTB-213ENST00000493945 RPS24P62847 133 aaKnown RBP15.34■□□□□ 0.05
ACTB-213ENST00000493945 DMC1Q14565 340 aa15.34■□□□□ 0.05
ACTB-213ENST00000493945 CA9Q16790 459 aa15.34■□□□□ 0.05
ACTB-213ENST00000493945 PARP15Q460N3 678 aa15.34■□□□□ 0.05
ACTB-213ENST00000493945 ANKRD20A8PQ5CZ79 823 aa15.34■□□□□ 0.05
ACTB-213ENST00000493945 FYB2Q5VWT5 728 aa15.34■□□□□ 0.05
ACTB-213ENST00000493945 TXNRD3NBQ6F5E7 133 aa15.34■□□□□ 0.05
ACTB-213ENST00000493945 GRAMD4Q6IC98 578 aa15.34■□□□□ 0.05
ACTB-213ENST00000493945 POTEHQ6S545 545 aa15.34■□□□□ 0.05
ACTB-213ENST00000493945 ANKS1BQ7Z6G8 1248 aa15.34■□□□□ 0.05
ACTB-213ENST00000493945 ZNF354CQ86Y25 554 aa15.34■□□□□ 0.05
ACTB-213ENST00000493945 LRRC49Q8IUZ0 686 aa15.34■□□□□ 0.05
ACTB-213ENST00000493945 AHI1Q8N157 1196 aa15.34■□□□□ 0.05
ACTB-213ENST00000493945 PYROXD2Q8N2H3 581 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms