RNA–Protein interactions for RNA: ENST00000493919.5

BRCA1-222, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-222ENST00000493919 SLC1A1P43005 524 aa11.93□□□□□ -0.5
BRCA1-222ENST00000493919 WNT7BP56706 349 aa11.93□□□□□ -0.5
BRCA1-222ENST00000493919 LEXMQ3ZCV2 418 aa11.93□□□□□ -0.5
BRCA1-222ENST00000493919 FUT11Q495W5 492 aa11.93□□□□□ -0.5
BRCA1-222ENST00000493919 FOXB2Q5VYV0 432 aa11.93□□□□□ -0.5
BRCA1-222ENST00000493919 BORAQ6PGQ7 559 aa11.93□□□□□ -0.5
BRCA1-222ENST00000493919 PATL1Q86TB9 770 aaKnown RBP11.93□□□□□ -0.5
BRCA1-222ENST00000493919 FAM124AQ86V42 546 aa11.93□□□□□ -0.5
BRCA1-222ENST00000493919 EXD1Q8NHP7 514 aa11.93□□□□□ -0.5
BRCA1-222ENST00000493919 SPPL3Q8TCT6 385 aa11.93□□□□□ -0.5
BRCA1-222ENST00000493919 FNIP1Q8TF40 1166 aa11.93□□□□□ -0.5
BRCA1-222ENST00000493919 PBXIP1Q96AQ6 731 aa11.93□□□□□ -0.5
BRCA1-222ENST00000493919 EEF2KMTQ96G04 330 aa11.93□□□□□ -0.5
BRCA1-222ENST00000493919 POM121Q96HA1 1249 aa11.93□□□□□ -0.5
BRCA1-222ENST00000493919 FAM84AQ96KN4 292 aa11.93□□□□□ -0.5
BRCA1-222ENST00000493919 CCDC77Q9BR77 488 aa11.93□□□□□ -0.5
BRCA1-222ENST00000493919 CALN1Q9BXU9 219 aa11.93□□□□□ -0.5
BRCA1-222ENST00000493919 RAD21L1Q9H4I0 556 aa11.93□□□□□ -0.5
BRCA1-222ENST00000493919 TLR9Q9NR96 1032 aa11.93□□□□□ -0.5
BRCA1-222ENST00000493919 UBQLN1Q9UMX0 589 aaKnown RBP11.93□□□□□ -0.5
BRCA1-222ENST00000493919 PRRC2BQ5JSZ5 2229 aaKnown RBP11.93□□□□□ -0.5
BRCA1-222ENST00000493919 ATG2AQ2TAZ0 1938 aa11.92□□□□□ -0.5
BRCA1-222ENST00000493919 MAGEA13PA6NCF6 341 aa11.92□□□□□ -0.5
BRCA1-222ENST00000493919 TRIM49BA6NDI0 452 aa11.92□□□□□ -0.5
BRCA1-222ENST00000493919 PODXLO00592 558 aa11.92□□□□□ -0.5
BRCA1-222ENST00000493919 E2F3O00716 465 aa11.92□□□□□ -0.5
BRCA1-222ENST00000493919 PSMA7O14818 248 aa11.92□□□□□ -0.5
BRCA1-222ENST00000493919 B3GAT3O94766 335 aa11.92□□□□□ -0.5
BRCA1-222ENST00000493919 KLHL2O95198 593 aa11.92□□□□□ -0.5
BRCA1-222ENST00000493919 IL18RAPO95256 599 aa11.92□□□□□ -0.5
BRCA1-222ENST00000493919 RHOXF2BP0C7M4 288 aa11.92□□□□□ -0.5
BRCA1-222ENST00000493919 DLATP10515 647 aaKnown RBP11.92□□□□□ -0.5
BRCA1-222ENST00000493919 ATF6P18850 670 aa11.92□□□□□ -0.5
BRCA1-222ENST00000493919 BMP6P22004 513 aa11.92□□□□□ -0.5
BRCA1-222ENST00000493919 DNAJB1P25685 340 aa11.92□□□□□ -0.5
BRCA1-222ENST00000493919 VBP1P61758 197 aa11.92□□□□□ -0.5
BRCA1-222ENST00000493919 TFAMQ00059 246 aaKnown RBP11.92□□□□□ -0.5
BRCA1-222ENST00000493919 ITGA9Q13797 1035 aa11.92□□□□□ -0.5
BRCA1-222ENST00000493919 MORC3Q14149 939 aa11.92□□□□□ -0.5
BRCA1-222ENST00000493919 ZNF423Q2M1K9 1284 aa11.92□□□□□ -0.5
BRCA1-222ENST00000493919 SHEQ5VZ18 495 aa11.92□□□□□ -0.5
BRCA1-222ENST00000493919 PLPP4Q5VZY2 271 aa11.92□□□□□ -0.5
BRCA1-222ENST00000493919 ANKMY2Q8IV38 441 aa11.92□□□□□ -0.5
BRCA1-222ENST00000493919 CD302Q8IX05 232 aa11.92□□□□□ -0.5
BRCA1-222ENST00000493919 C12orf56Q8IXR9 622 aa11.92□□□□□ -0.5
BRCA1-222ENST00000493919 ADSSL1Q8N142 457 aa11.92□□□□□ -0.5
BRCA1-222ENST00000493919 ENKURQ8TC29 256 aa11.92□□□□□ -0.5
BRCA1-222ENST00000493919 FBXL18Q96ME1 805 aa11.92□□□□□ -0.5
BRCA1-222ENST00000493919 TTC25Q96NG3 672 aa11.92□□□□□ -0.5
BRCA1-222ENST00000493919 TCF25Q9BQ70 676 aa11.92□□□□□ -0.5
BRCA1-222ENST00000493919 RHOXF2Q9BQY4 288 aa11.92□□□□□ -0.5
BRCA1-222ENST00000493919 COLEC11Q9BWP8 271 aa11.92□□□□□ -0.5
BRCA1-222ENST00000493919 EPC1Q9H2F5 836 aa11.92□□□□□ -0.5
BRCA1-222ENST00000493919 ASB7Q9H672 318 aa11.92□□□□□ -0.5
BRCA1-222ENST00000493919 CAAP1Q9H8G2 361 aa11.92□□□□□ -0.5
BRCA1-222ENST00000493919 VPS37BQ9H9H4 285 aa11.92□□□□□ -0.5
BRCA1-222ENST00000493919 KIAA1586Q9HCI6 787 aa11.92□□□□□ -0.5
BRCA1-222ENST00000493919 TAS2R7Q9NYW3 318 aa11.92□□□□□ -0.5
BRCA1-222ENST00000493919 PTTG2Q9NZH5 202 aa11.92□□□□□ -0.5
BRCA1-222ENST00000493919 FNIP2Q9P278 1114 aa11.92□□□□□ -0.5
BRCA1-222ENST00000493919 KCNN3Q9UGI6 736 aa11.92□□□□□ -0.5
BRCA1-222ENST00000493919 ADAM28Q9UKQ2 775 aa11.92□□□□□ -0.5
BRCA1-222ENST00000493919 CTNND2Q9UQB3 1225 aa11.92□□□□□ -0.5
BRCA1-222ENST00000493919 TADA2AO75478 443 aa11.92□□□□□ -0.5
BRCA1-222ENST00000493919 CD44P16070 742 aaKnown RBP11.92□□□□□ -0.5
BRCA1-222ENST00000493919 HSD3B2P26439 372 aa11.92□□□□□ -0.5
BRCA1-222ENST00000493919 PTGS2P35354 604 aa11.92□□□□□ -0.5
BRCA1-222ENST00000493919 IRS1P35568 1242 aa11.92□□□□□ -0.5
BRCA1-222ENST00000493919 SERPINB4P48594 390 aa11.92□□□□□ -0.5
BRCA1-222ENST00000493919 CASP4P49662 377 aa11.92□□□□□ -0.5
BRCA1-222ENST00000493919 CCDC85BQ15834 202 aaPredicted RBP11.92□□□□□ -0.5
BRCA1-222ENST00000493919 SPDYAQ5MJ70 313 aa11.92□□□□□ -0.5
BRCA1-222ENST00000493919 CLVS2Q5SYC1 327 aa11.92□□□□□ -0.5
BRCA1-222ENST00000493919 FUT10Q6P4F1 479 aa11.92□□□□□ -0.5
BRCA1-222ENST00000493919 ARHGAP36Q6ZRI8 547 aa11.92□□□□□ -0.5
BRCA1-222ENST00000493919 CACNA2D4Q7Z3S7 1137 aa11.92□□□□□ -0.5
BRCA1-222ENST00000493919 TREML1Q86YW5 311 aa11.92□□□□□ -0.5
BRCA1-222ENST00000493919 SYTL1Q8IYJ3 562 aa11.92□□□□□ -0.5
BRCA1-222ENST00000493919 SLC38A6Q8IZM9 456 aa11.92□□□□□ -0.5
BRCA1-222ENST00000493919 C3orf58Q8NDZ4 430 aa11.92□□□□□ -0.5
BRCA1-222ENST00000493919 BEST2Q8NFU1 509 aa11.92□□□□□ -0.5
BRCA1-222ENST00000493919 FBF1Q8TES7 1133 aa11.92□□□□□ -0.5
BRCA1-222ENST00000493919 COG1Q8WTW3 980 aa11.92□□□□□ -0.5
BRCA1-222ENST00000493919 HSPH1Q92598 858 aa11.92□□□□□ -0.5
BRCA1-222ENST00000493919 ARL8AQ96BM9 186 aa11.92□□□□□ -0.5
BRCA1-222ENST00000493919 MRPL38Q96DV4 380 aaKnown RBP11.92□□□□□ -0.5
BRCA1-222ENST00000493919 IQCDQ96DY2 449 aa11.92□□□□□ -0.5
BRCA1-222ENST00000493919 COQ7Q99807 217 aa11.92□□□□□ -0.5
BRCA1-222ENST00000493919 NCOR1P1Q9H4R4 102 aa11.92□□□□□ -0.5
BRCA1-222ENST00000493919 HAUS4Q9H6D7 363 aa11.92□□□□□ -0.5
BRCA1-222ENST00000493919 MMRN2Q9H8L6 949 aa11.92□□□□□ -0.5
BRCA1-222ENST00000493919 CBX8Q9HC52 389 aa11.92□□□□□ -0.5
BRCA1-222ENST00000493919 CYP4F12Q9HCS2 524 aa11.92□□□□□ -0.5
BRCA1-222ENST00000493919 SLC7A8Q9UHI5 535 aa11.92□□□□□ -0.5
BRCA1-222ENST00000493919 MTCH2Q9Y6C9 303 aa11.92□□□□□ -0.5
BRCA1-222ENST00000493919 E9PBE3 544 aa11.91□□□□□ -0.5
BRCA1-222ENST00000493919 PLOD2O00469 737 aa11.91□□□□□ -0.5
BRCA1-222ENST00000493919 ENC1O14682 589 aa11.91□□□□□ -0.5
BRCA1-222ENST00000493919 ICMTO60725 284 aa11.91□□□□□ -0.5
BRCA1-222ENST00000493919 RASGRP1O95267 797 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms