RNA–Protein interactions for RNA: ENST00000493916.1

SNIP1-203, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 4

Gene SNIP1, Length 546 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-203ENST00000493916 USP18Q9UMW8 372 aa23.39■■□□□ 1.33
SNIP1-203ENST00000493916 PLA2G4CQ9UP65 541 aa23.39■■□□□ 1.33
SNIP1-203ENST00000493916 HS3ST4Q9Y661 456 aa23.39■■□□□ 1.33
SNIP1-203ENST00000493916 SYNCRIPO60506 623 aaKnown RBP23.38■■□□□ 1.33
SNIP1-203ENST00000493916 ZNF217O75362 1048 aa23.38■■□□□ 1.33
SNIP1-203ENST00000493916 POLR2EP19388 210 aaKnown RBP23.38■■□□□ 1.33
SNIP1-203ENST00000493916 LMNB2Q03252 620 aa23.38■■□□□ 1.33
SNIP1-203ENST00000493916 DEUP1Q05D60 604 aa23.38■■□□□ 1.33
SNIP1-203ENST00000493916 AUHQ13825 339 aaKnown RBP23.38■■□□□ 1.33
SNIP1-203ENST00000493916 FBXL22Q6P050 247 aa23.38■■□□□ 1.33
SNIP1-203ENST00000493916 IRF2BP2Q7Z5L9 587 aa23.38■■□□□ 1.33
SNIP1-203ENST00000493916 CYB5D2Q8WUJ1 264 aa23.38■■□□□ 1.33
SNIP1-203ENST00000493916 WDCPQ9H6R7 721 aa23.38■■□□□ 1.33
SNIP1-203ENST00000493916 METTL5Q9NRN9 209 aaKnown RBP23.38■■□□□ 1.33
SNIP1-203ENST00000493916 KIAA1522Q9P206 1035 aaPredicted RBP23.38■■□□□ 1.33
SNIP1-203ENST00000493916 MBD1Q9UIS9 605 aaPredicted RBP23.38■■□□□ 1.33
SNIP1-203ENST00000493916 SPAG17Q6Q759 2223 aa23.37■■□□□ 1.33
SNIP1-203ENST00000493916 A0A1B0GVM2 712 aa23.37■■□□□ 1.33
SNIP1-203ENST00000493916 TCAF2A6NFQ2 919 aa23.37■■□□□ 1.33
SNIP1-203ENST00000493916 H0Y626 953 aa23.37■■□□□ 1.33
SNIP1-203ENST00000493916 FOXD2O60548 495 aaPredicted RBP23.37■■□□□ 1.33
SNIP1-203ENST00000493916 PAGE1O75459 146 aa23.37■■□□□ 1.33
SNIP1-203ENST00000493916 ADCY5O95622 1261 aa23.37■■□□□ 1.33
SNIP1-203ENST00000493916 RDXP35241 583 aaKnown RBP23.37■■□□□ 1.33
SNIP1-203ENST00000493916 C5orf22Q49AR2 442 aa23.37■■□□□ 1.33
SNIP1-203ENST00000493916 FNDC3BQ53EP0 1204 aaKnown RBP23.37■■□□□ 1.33
SNIP1-203ENST00000493916 FSCBQ5H9T9 825 aa23.37■■□□□ 1.33
SNIP1-203ENST00000493916 ACBD5Q5T8D3 534 aaPredicted RBP23.37■■□□□ 1.33
SNIP1-203ENST00000493916 CFAP57Q96MR6 1250 aa23.37■■□□□ 1.33
SNIP1-203ENST00000493916 SYT11Q9BT88 431 aa23.37■■□□□ 1.33
SNIP1-203ENST00000493916 TTYH3Q9C0H2 523 aa23.37■■□□□ 1.33
SNIP1-203ENST00000493916 TKTL2Q9H0I9 626 aa23.37■■□□□ 1.33
SNIP1-203ENST00000493916 ARRDC1-AS1Q9H2J1 176 aa23.37■■□□□ 1.33
SNIP1-203ENST00000493916 ADAM22Q9P0K1 906 aa23.37■■□□□ 1.33
SNIP1-203ENST00000493916 INTS6Q9UL03 887 aaKnown RBP23.37■■□□□ 1.33
SNIP1-203ENST00000493916 CKAP5Q14008 2032 aa23.37■■□□□ 1.33
SNIP1-203ENST00000493916 LRRC53A6NM62 1247 aa23.36■■□□□ 1.33
SNIP1-203ENST00000493916 ASLP04424 464 aa23.36■■□□□ 1.33
SNIP1-203ENST00000493916 CALB1P05937 261 aa23.36■■□□□ 1.33
SNIP1-203ENST00000493916 EPHX1P07099 455 aa23.36■■□□□ 1.33
SNIP1-203ENST00000493916 CSKP41240 450 aa23.36■■□□□ 1.33
SNIP1-203ENST00000493916 FANCCQ00597 558 aa23.36■■□□□ 1.33
SNIP1-203ENST00000493916 C1QBPQ07021 282 aaKnown RBP23.36■■□□□ 1.33
SNIP1-203ENST00000493916 CAMK2GQ13555 558 aaPredicted RBP23.36■■□□□ 1.33
SNIP1-203ENST00000493916 SLC12A1Q13621 1099 aa23.36■■□□□ 1.33
SNIP1-203ENST00000493916 PITRM1Q5JRX3 1037 aa23.36■■□□□ 1.33
SNIP1-203ENST00000493916 SPDYCQ5MJ68 293 aa23.36■■□□□ 1.33
SNIP1-203ENST00000493916 PLA2G2CQ5R387 149 aa23.36■■□□□ 1.33
SNIP1-203ENST00000493916 MON1BQ7L1V2 547 aa23.36■■□□□ 1.33
SNIP1-203ENST00000493916 METTL3Q86U44 580 aaKnown RBP23.36■■□□□ 1.33
SNIP1-203ENST00000493916 CCAR2Q8N163 923 aaKnown RBP23.36■■□□□ 1.33
SNIP1-203ENST00000493916 ERLEC1Q96DZ1 483 aa23.36■■□□□ 1.33
SNIP1-203ENST00000493916 RPRD1AQ96P16 312 aaPredicted RBP23.36■■□□□ 1.33
SNIP1-203ENST00000493916 EDEM3Q9BZQ6 932 aa23.36■■□□□ 1.33
SNIP1-203ENST00000493916 ANLNQ9NQW6 1124 aa23.36■■□□□ 1.33
SNIP1-203ENST00000493916 SEPT11Q9NVA2 429 aaKnown RBP23.36■■□□□ 1.33
SNIP1-203ENST00000493916 GOLGA6L19H0YKK7 550 aa23.35■■□□□ 1.33
SNIP1-203ENST00000493916 I6L893 689 aaPredicted RBP23.35■■□□□ 1.33
SNIP1-203ENST00000493916 ENDOD1O94919 500 aa23.35■■□□□ 1.33
SNIP1-203ENST00000493916 MOCS3O95396 460 aa23.35■■□□□ 1.33
SNIP1-203ENST00000493916 C7P10643 843 aa23.35■■□□□ 1.33
SNIP1-203ENST00000493916 MPLP40238 635 aa23.35■■□□□ 1.33
SNIP1-203ENST00000493916 COPAP53621 1224 aa23.35■■□□□ 1.33
SNIP1-203ENST00000493916 FIGNQ5HY92 759 aa23.35■■□□□ 1.33
SNIP1-203ENST00000493916 SLC36A4Q6YBV0 504 aa23.35■■□□□ 1.33
SNIP1-203ENST00000493916 PRR23CQ6ZRP0 262 aa23.35■■□□□ 1.33
SNIP1-203ENST00000493916 LPCAT2Q7L5N7 544 aa23.35■■□□□ 1.33
SNIP1-203ENST00000493916 CIR1Q86X95 450 aaPredicted RBP23.35■■□□□ 1.33
SNIP1-203ENST00000493916 EMC1Q8N766 993 aa23.35■■□□□ 1.33
SNIP1-203ENST00000493916 FRMD1Q8N878 549 aa23.35■■□□□ 1.33
SNIP1-203ENST00000493916 KDM1BQ8NB78 822 aa23.35■■□□□ 1.33
SNIP1-203ENST00000493916 IGSF8Q969P0 613 aa23.35■■□□□ 1.33
SNIP1-203ENST00000493916 MKRN2Q9H000 416 aaKnown RBP23.35■■□□□ 1.33
SNIP1-203ENST00000493916 SLC6A17Q9H1V8 727 aa23.35■■□□□ 1.33
SNIP1-203ENST00000493916 PRDM16Q9HAZ2 1276 aa23.35■■□□□ 1.33
SNIP1-203ENST00000493916 AIPL1Q9NZN9 384 aa23.35■■□□□ 1.33
SNIP1-203ENST00000493916 VANGL2Q9ULK5 521 aa23.35■■□□□ 1.33
SNIP1-203ENST00000493916 IGHV1OR15-9A0A0B4J2B8 117 aa23.34■■□□□ 1.33
SNIP1-203ENST00000493916 BCLAF3A2AJT9 711 aaKnown RBP23.34■■□□□ 1.33
SNIP1-203ENST00000493916 C2CD4BA6NLJ0 364 aa23.34■■□□□ 1.33
SNIP1-203ENST00000493916 PRR5-ARHGAP8B1AHC4 643 aa23.34■■□□□ 1.33
SNIP1-203ENST00000493916 MAP3K13O43283 966 aa23.34■■□□□ 1.33
SNIP1-203ENST00000493916 ZNF806P0C7X5 589 aa23.34■■□□□ 1.33
SNIP1-203ENST00000493916 HLA-EP13747 358 aa23.34■■□□□ 1.33
SNIP1-203ENST00000493916 ATXN1P54253 815 aaKnown RBP23.34■■□□□ 1.33
SNIP1-203ENST00000493916 OXCT1P55809 520 aa23.34■■□□□ 1.33
SNIP1-203ENST00000493916 ARHGAP8P85298 464 aa23.34■■□□□ 1.33
SNIP1-203ENST00000493916 PLEKHG6Q3KR16 790 aa23.34■■□□□ 1.33
SNIP1-203ENST00000493916 KIAA1324Q6UXG2 1013 aaKnown RBP23.34■■□□□ 1.33
SNIP1-203ENST00000493916 ZNF683Q8IZ20 524 aa23.34■■□□□ 1.33
SNIP1-203ENST00000493916 C3orf20Q8ND61 904 aa23.34■■□□□ 1.33
SNIP1-203ENST00000493916 MYO19Q96H55 970 aa23.34■■□□□ 1.33
SNIP1-203ENST00000493916 C1orf74Q96LT6 269 aa23.34■■□□□ 1.33
SNIP1-203ENST00000493916 FBRSQ9HAH7 460 aa23.34■■□□□ 1.33
SNIP1-203ENST00000493916 USP36Q9P275 1121 aaKnown RBP23.34■■□□□ 1.33
SNIP1-203ENST00000493916 CLDN11O75508 207 aa23.33■■□□□ 1.33
SNIP1-203ENST00000493916 KRT3P12035 628 aa23.33■■□□□ 1.33
SNIP1-203ENST00000493916 PDGFRAP16234 1089 aa23.33■■□□□ 1.33
SNIP1-203ENST00000493916 SDC4P31431 198 aa23.33■■□□□ 1.33
SNIP1-203ENST00000493916 GGCXP38435 758 aa23.33■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms