RNA–Protein interactions for RNA: ENST00000493886.5

VCP-207, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 2,942 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-207ENST00000493886 DPYSQ14117 519 aa14.17□□□□□ -0.14
VCP-207ENST00000493886 DBN1Q16643 649 aa14.17□□□□□ -0.14
VCP-207ENST00000493886 PLEKHG4Q58EX7 1191 aa14.17□□□□□ -0.14
VCP-207ENST00000493886 CD300LGQ6UXG3 332 aa14.17□□□□□ -0.14
VCP-207ENST00000493886 DENND5BQ6ZUT9 1274 aa14.17□□□□□ -0.14
VCP-207ENST00000493886 RFX8Q6ZV50 586 aa14.17□□□□□ -0.14
VCP-207ENST00000493886 PRPF39Q86UA1 669 aaKnown RBP14.17□□□□□ -0.14
VCP-207ENST00000493886 TCP10LQ8TDR4 215 aa14.17□□□□□ -0.14
VCP-207ENST00000493886 HASPINQ8TF76 798 aa14.17□□□□□ -0.14
VCP-207ENST00000493886 ZNF75CPQ92670 426 aaPredicted RBP14.17□□□□□ -0.14
VCP-207ENST00000493886 NTAN1Q96AB6 310 aa14.17□□□□□ -0.14
VCP-207ENST00000493886 GRAMD1AQ96CP6 724 aa14.17□□□□□ -0.14
VCP-207ENST00000493886 ACBD6Q9BR61 282 aa14.17□□□□□ -0.14
VCP-207ENST00000493886 IQCGQ9H095 443 aaKnown RBP14.17□□□□□ -0.14
VCP-207ENST00000493886 CSNK1G1Q9HCP0 422 aa14.17□□□□□ -0.14
VCP-207ENST00000493886 CASP8AP2Q9UKL3 1982 aa14.17□□□□□ -0.14
VCP-207ENST00000493886 SF3B1O75533 1304 aaKnown RBP eCLIP14.16□□□□□ -0.14
VCP-207ENST00000493886 IQANK1A0A1B0GTG1 560 aa14.16□□□□□ -0.14
VCP-207ENST00000493886 CYP11A1P05108 521 aa14.16□□□□□ -0.14
VCP-207ENST00000493886 GM2AP17900 193 aa14.16□□□□□ -0.14
VCP-207ENST00000493886 AIF1P55008 147 aa14.16□□□□□ -0.14
VCP-207ENST00000493886 TUSC3Q13454 348 aa14.16□□□□□ -0.14
VCP-207ENST00000493886 ITGA7Q13683 1181 aa14.16□□□□□ -0.14
VCP-207ENST00000493886 LAMB3Q13751 1172 aa14.16□□□□□ -0.14
VCP-207ENST00000493886 PRKD1Q15139 912 aaPredicted RBP14.16□□□□□ -0.14
VCP-207ENST00000493886 TRIM71Q2Q1W2 868 aaKnown RBP14.16□□□□□ -0.14
VCP-207ENST00000493886 INTS6LQ5JSJ4 861 aaKnown RBP14.16□□□□□ -0.14
VCP-207ENST00000493886 FAM171BQ6P995 826 aa14.16□□□□□ -0.14
VCP-207ENST00000493886 MTDHQ86UE4 582 aaKnown RBP14.16□□□□□ -0.14
VCP-207ENST00000493886 B4GALNT2Q8NHY0 566 aa14.16□□□□□ -0.14
VCP-207ENST00000493886 RFWD2Q8NHY2 731 aa14.16□□□□□ -0.14
VCP-207ENST00000493886 C10orf82Q8WW14 230 aa14.16□□□□□ -0.14
VCP-207ENST00000493886 SPDL1Q96EA4 605 aa14.16□□□□□ -0.14
VCP-207ENST00000493886 RNF186Q9NXI6 227 aa14.16□□□□□ -0.14
VCP-207ENST00000493886 FAM72CH0Y354 149 aa14.16□□□□□ -0.14
VCP-207ENST00000493886 ZWINTO95229 277 aa14.16□□□□□ -0.14
VCP-207ENST00000493886 C1QAP02745 245 aa14.16□□□□□ -0.14
VCP-207ENST00000493886 AP1B1Q10567 949 aa14.16□□□□□ -0.14
VCP-207ENST00000493886 PAFAH1B3Q15102 231 aaKnown RBP14.16□□□□□ -0.14
VCP-207ENST00000493886 PDK1Q15118 436 aa14.16□□□□□ -0.14
VCP-207ENST00000493886 FAM72AQ5TYM5 149 aa14.16□□□□□ -0.14
VCP-207ENST00000493886 FAM72DQ6L9T8 149 aa14.16□□□□□ -0.14
VCP-207ENST00000493886 NLRP9Q7RTR0 991 aa14.16□□□□□ -0.14
VCP-207ENST00000493886 BHLHA9Q7RTU4 235 aa14.16□□□□□ -0.14
VCP-207ENST00000493886 LONP2Q86WA8 852 aa14.16□□□□□ -0.14
VCP-207ENST00000493886 FAM72BQ86X60 149 aa14.16□□□□□ -0.14
VCP-207ENST00000493886 PIAS4Q8N2W9 510 aaPredicted RBP14.16□□□□□ -0.14
VCP-207ENST00000493886 PTPRN2Q92932 1015 aa14.16□□□□□ -0.14
VCP-207ENST00000493886 SIGLEC10Q96LC7 697 aa14.16□□□□□ -0.14
VCP-207ENST00000493886 PLAC1Q9HBJ0 212 aa14.16□□□□□ -0.14
VCP-207ENST00000493886 ANLNQ9NQW6 1124 aa14.16□□□□□ -0.14
VCP-207ENST00000493886 DDIT4Q9NX09 232 aa14.16□□□□□ -0.14
VCP-207ENST00000493886 DCLK1O15075 740 aa14.15□□□□□ -0.14
VCP-207ENST00000493886 T-ENOLP0DO92 83 aa14.15□□□□□ -0.14
VCP-207ENST00000493886 BDNFP23560 247 aa14.15□□□□□ -0.14
VCP-207ENST00000493886 FDFT1P37268 417 aa14.15□□□□□ -0.14
VCP-207ENST00000493886 FAAP100Q0VG06 881 aa14.15□□□□□ -0.14
VCP-207ENST00000493886 SCAPQ12770 1279 aa14.15□□□□□ -0.14
VCP-207ENST00000493886 FAM26DQ5JW98 314 aa14.15□□□□□ -0.14
VCP-207ENST00000493886 TTC8Q8TAM2 541 aa14.15□□□□□ -0.14
VCP-207ENST00000493886 ALKBH8Q96BT7 664 aaKnown RBP14.15□□□□□ -0.14
VCP-207ENST00000493886 PGAP3Q96FM1 320 aaPredicted RBP14.15□□□□□ -0.14
VCP-207ENST00000493886 P2RY11Q96G91 374 aa14.15□□□□□ -0.14
VCP-207ENST00000493886 PRR11Q96HE9 360 aaPredicted RBP14.15□□□□□ -0.14
VCP-207ENST00000493886 TBC1D10AQ9BXI6 508 aa14.15□□□□□ -0.14
VCP-207ENST00000493886 PRDM12Q9H4Q4 367 aa14.15□□□□□ -0.14
VCP-207ENST00000493886 XAB2Q9HCS7 855 aaKnown RBP14.15□□□□□ -0.14
VCP-207ENST00000493886 RRN3Q9NYV6 651 aa14.15□□□□□ -0.14
VCP-207ENST00000493886 FBXW11Q9UKB1 542 aa14.15□□□□□ -0.14
VCP-207ENST00000493886 DSEQ9UL01 958 aa14.15□□□□□ -0.14
VCP-207ENST00000493886 MYO18AQ92614 2054 aaKnown RBP14.15□□□□□ -0.14
VCP-207ENST00000493886 I6L893 689 aaPredicted RBP14.15□□□□□ -0.14
VCP-207ENST00000493886 M0QZQ0 153 aa14.15□□□□□ -0.14
VCP-207ENST00000493886 RNF103O00237 685 aa14.15□□□□□ -0.14
VCP-207ENST00000493886 TRDMT1O14717 391 aaKnown RBP14.15□□□□□ -0.14
VCP-207ENST00000493886 ENTPD5O75356 428 aa14.15□□□□□ -0.14
VCP-207ENST00000493886 STK10O94804 968 aaKnown RBP14.15□□□□□ -0.14
VCP-207ENST00000493886 MT-ND3P03897 115 aa14.15□□□□□ -0.14
VCP-207ENST00000493886 NAT2P11245 290 aa14.15□□□□□ -0.14
VCP-207ENST00000493886 SKIP12755 728 aa14.15□□□□□ -0.14
VCP-207ENST00000493886 ALDH3A1P30838 453 aa14.15□□□□□ -0.14
VCP-207ENST00000493886 GRIA1P42261 906 aa14.15□□□□□ -0.14
VCP-207ENST00000493886 GLUD2P49448 558 aa14.15□□□□□ -0.14
VCP-207ENST00000493886 SESN3P58005 492 aa14.15□□□□□ -0.14
VCP-207ENST00000493886 RGS9BPQ6ZS82 235 aa14.15□□□□□ -0.14
VCP-207ENST00000493886 CTAGE3PQ8IX95 158 aa14.15□□□□□ -0.14
VCP-207ENST00000493886 BANPQ8N9N5 519 aa14.15□□□□□ -0.14
VCP-207ENST00000493886 COLGALT1Q8NBJ5 622 aa14.15□□□□□ -0.14
VCP-207ENST00000493886 CCNYQ8ND76 341 aa14.15□□□□□ -0.14
VCP-207ENST00000493886 FAM13CQ8NE31 585 aa14.15□□□□□ -0.14
VCP-207ENST00000493886 RSPH1Q8WYR4 309 aa14.15□□□□□ -0.14
VCP-207ENST00000493886 EDEM1Q92611 657 aa14.15□□□□□ -0.14
VCP-207ENST00000493886 HHIPL1Q96JK4 782 aa14.15□□□□□ -0.14
VCP-207ENST00000493886 TMLHEQ9NVH6 421 aa14.15□□□□□ -0.14
VCP-207ENST00000493886 ZFP69BQ9UJL9 534 aa14.15□□□□□ -0.14
VCP-207ENST00000493886 MAD1L1Q9Y6D9 718 aa14.15□□□□□ -0.14
VCP-207ENST00000493886 F5H423 210 aaPredicted RBP14.14□□□□□ -0.15
VCP-207ENST00000493886 APOEP02649 317 aa14.14□□□□□ -0.15
VCP-207ENST00000493886 AMHP03971 560 aa14.14□□□□□ -0.15
VCP-207ENST00000493886 GSTA2P09210 222 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms