RNA–Protein interactions for RNA: ENST00000493475.2

COL6A3-213, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2

Gene COL6A3, Length 669 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-213ENST00000493475 RBBP8NLQ8NC74 664 aaPredicted RBP12.01□□□□□ -0.49
COL6A3-213ENST00000493475 FIBINQ8TAL6 211 aa12.01□□□□□ -0.49
COL6A3-213ENST00000493475 SLC35F5Q8WV83 523 aa12.01□□□□□ -0.49
COL6A3-213ENST00000493475 MIS12Q9H081 205 aa12.01□□□□□ -0.49
COL6A3-213ENST00000493475 PRSS16Q9NQE7 514 aa12.01□□□□□ -0.49
COL6A3-213ENST00000493475 FBXL12Q9NXK8 326 aa12.01□□□□□ -0.49
COL6A3-213ENST00000493475 STIM2Q9P246 746 aa12.01□□□□□ -0.49
COL6A3-213ENST00000493475 CLEC4EQ9ULY5 219 aa12.01□□□□□ -0.49
COL6A3-213ENST00000493475 ANKRD6Q9Y2G4 727 aa12.01□□□□□ -0.49
COL6A3-213ENST00000493475 PCDH15Q96QU1 1955 aa12.01□□□□□ -0.49
COL6A3-213ENST00000493475 CACNA1GO43497 2377 aa12□□□□□ -0.49
COL6A3-213ENST00000493475 PKD1L2Q7Z442 2459 aa12□□□□□ -0.49
COL6A3-213ENST00000493475 FAM47DPA6NHR8 397 aa12□□□□□ -0.49
COL6A3-213ENST00000493475 PCDHGA12O60330 932 aa12□□□□□ -0.49
COL6A3-213ENST00000493475 MAGEC1O60732 1142 aa12□□□□□ -0.49
COL6A3-213ENST00000493475 IGLV3-27P01718 113 aa12□□□□□ -0.49
COL6A3-213ENST00000493475 KRT5P13647 590 aa12□□□□□ -0.49
COL6A3-213ENST00000493475 ACSL1P33121 698 aa12□□□□□ -0.49
COL6A3-213ENST00000493475 ARRB1P49407 418 aaPredicted RBP12□□□□□ -0.49
COL6A3-213ENST00000493475 RACK1P63244 317 aaKnown RBP12□□□□□ -0.49
COL6A3-213ENST00000493475 FAM193AP78312 1265 aa12□□□□□ -0.49
COL6A3-213ENST00000493475 SULT2A1Q06520 285 aa12□□□□□ -0.49
COL6A3-213ENST00000493475 CCDC15Q0P6D6 951 aa12□□□□□ -0.49
COL6A3-213ENST00000493475 SCAPQ12770 1279 aa12□□□□□ -0.49
COL6A3-213ENST00000493475 SLC12A1Q13621 1099 aa12□□□□□ -0.49
COL6A3-213ENST00000493475 MEA1Q16626 185 aa12□□□□□ -0.49
COL6A3-213ENST00000493475 HNRNPA1L2Q32P51 320 aaKnown RBP12□□□□□ -0.49
COL6A3-213ENST00000493475 PKDCCQ504Y2 493 aa12□□□□□ -0.49
COL6A3-213ENST00000493475 ARSIQ5FYB1 569 aa12□□□□□ -0.49
COL6A3-213ENST00000493475 KIAA0895LQ68EN5 471 aa12□□□□□ -0.49
COL6A3-213ENST00000493475 PMF1Q6P1K2 205 aa12□□□□□ -0.49
COL6A3-213ENST00000493475 RFWD3Q6PCD5 774 aa12□□□□□ -0.49
COL6A3-213ENST00000493475 FOXR2Q6PJQ5 311 aa12□□□□□ -0.49
COL6A3-213ENST00000493475 CCNI2Q6ZMN8 369 aaPredicted RBP12□□□□□ -0.49
COL6A3-213ENST00000493475 BEND5Q7L4P6 421 aa12□□□□□ -0.49
COL6A3-213ENST00000493475 ENOSF1Q7L5Y1 443 aa12□□□□□ -0.49
COL6A3-213ENST00000493475 BHLHA9Q7RTU4 235 aa12□□□□□ -0.49
COL6A3-213ENST00000493475 KIAA0907Q7Z7F0 614 aaPredicted RBP12□□□□□ -0.49
COL6A3-213ENST00000493475 ELOA2Q8IYF1 753 aaPredicted RBP12□□□□□ -0.49
COL6A3-213ENST00000493475 PNPLA1Q8N8W4 532 aa12□□□□□ -0.49
COL6A3-213ENST00000493475 NDRG1Q92597 394 aaKnown RBP12□□□□□ -0.49
COL6A3-213ENST00000493475 BIRC7Q96CA5 298 aa12□□□□□ -0.49
COL6A3-213ENST00000493475 NOX5Q96PH1 765 aa12□□□□□ -0.49
COL6A3-213ENST00000493475 RSPH9Q9H1X1 276 aaPredicted RBP12□□□□□ -0.49
COL6A3-213ENST00000493475 PABPC3Q9H361 631 aaKnown RBP12□□□□□ -0.49
COL6A3-213ENST00000493475 C6orf106Q9H6K1 298 aaPredicted RBP12□□□□□ -0.49
COL6A3-213ENST00000493475 GDPD2Q9HCC8 539 aa12□□□□□ -0.49
COL6A3-213ENST00000493475 TM9SF3Q9HD45 589 aa12□□□□□ -0.49
COL6A3-213ENST00000493475 FTSJ1Q9UET6 329 aa12□□□□□ -0.49
COL6A3-213ENST00000493475 FZD4Q9ULV1 537 aa12□□□□□ -0.49
COL6A3-213ENST00000493475 FNDC3AQ9Y2H6 1198 aaKnown RBP12□□□□□ -0.49
COL6A3-213ENST00000493475 ZDHHC9Q9Y397 364 aa12□□□□□ -0.49
COL6A3-213ENST00000493475 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12□□□□□ -0.49
COL6A3-213ENST00000493475 ANKRD11Q6UB99 2663 aaPredicted RBP12□□□□□ -0.49
COL6A3-213ENST00000493475 CEP192Q8TEP8 1941 aa11.99□□□□□ -0.49
COL6A3-213ENST00000493475 PCNX2A6NKB5 2137 aa11.99□□□□□ -0.49
COL6A3-213ENST00000493475 ATRXP46100 2492 aa11.99□□□□□ -0.49
COL6A3-213ENST00000493475 ASPMQ8IZT6 3477 aa11.99□□□□□ -0.49
COL6A3-213ENST00000493475 EDDM13A0A1B0GTR0 161 aa11.99□□□□□ -0.49
COL6A3-213ENST00000493475 F5H5T6 163 aa11.99□□□□□ -0.49
COL6A3-213ENST00000493475 CBFA2T3O75081 653 aa11.99□□□□□ -0.49
COL6A3-213ENST00000493475 RNASEH2AO75792 299 aaKnown RBP11.99□□□□□ -0.49
COL6A3-213ENST00000493475 LUC7L3O95232 432 aaKnown RBP11.99□□□□□ -0.49
COL6A3-213ENST00000493475 MOCS2O96007 188 aaPredicted RBP11.99□□□□□ -0.49
COL6A3-213ENST00000493475 ADH1BP00325 375 aa11.99□□□□□ -0.49
COL6A3-213ENST00000493475 ABCB4P21439 1286 aa11.99□□□□□ -0.49
COL6A3-213ENST00000493475 BRD2P25440 801 aaKnown RBP11.99□□□□□ -0.49
COL6A3-213ENST00000493475 CD70P32970 193 aa11.99□□□□□ -0.49
COL6A3-213ENST00000493475 HNF1BP35680 557 aa11.99□□□□□ -0.49
COL6A3-213ENST00000493475 NUDT1P36639 197 aa11.99□□□□□ -0.49
COL6A3-213ENST00000493475 CSKP41240 450 aa11.99□□□□□ -0.49
COL6A3-213ENST00000493475 ECT2LQ008S8 904 aa11.99□□□□□ -0.49
COL6A3-213ENST00000493475 ARID5BQ14865 1188 aa11.99□□□□□ -0.49
COL6A3-213ENST00000493475 PTPRNQ16849 979 aa11.99□□□□□ -0.49
COL6A3-213ENST00000493475 KIF19Q2TAC6 998 aa11.99□□□□□ -0.49
COL6A3-213ENST00000493475 RABGAP1LQ5R372 815 aa11.99□□□□□ -0.49
COL6A3-213ENST00000493475 KLHL10Q6JEL2 608 aa11.99□□□□□ -0.49
COL6A3-213ENST00000493475 SND1Q7KZF4 910 aaKnown RBP eCLIP11.99□□□□□ -0.49
COL6A3-213ENST00000493475 CHSY1Q86X52 802 aa11.99□□□□□ -0.49
COL6A3-213ENST00000493475 OXR1Q8N573 874 aa11.99□□□□□ -0.49
COL6A3-213ENST00000493475 ZNF366Q8N895 744 aa11.99□□□□□ -0.49
COL6A3-213ENST00000493475 ATP6V0D2Q8N8Y2 350 aa11.99□□□□□ -0.49
COL6A3-213ENST00000493475 OR2T34Q8NGX1 318 aa11.99□□□□□ -0.49
COL6A3-213ENST00000493475 SPATA20Q8TB22 786 aa11.99□□□□□ -0.49
COL6A3-213ENST00000493475 STK32AQ8WU08 396 aa11.99□□□□□ -0.49
COL6A3-213ENST00000493475 RNF34Q969K3 372 aa11.99□□□□□ -0.49
COL6A3-213ENST00000493475 TTC17Q96AE7 1141 aa11.99□□□□□ -0.49
COL6A3-213ENST00000493475 BTN2A3PQ96KV6 586 aa11.99□□□□□ -0.49
COL6A3-213ENST00000493475 POPDC2Q9HBU9 364 aa11.99□□□□□ -0.49
COL6A3-213ENST00000493475 AASDHPPTQ9NRN7 309 aa11.99□□□□□ -0.49
COL6A3-213ENST00000493475 TMEM51Q9NW97 253 aa11.99□□□□□ -0.49
COL6A3-213ENST00000493475 SNX11Q9Y5W9 270 aa11.99□□□□□ -0.49
COL6A3-213ENST00000493475 TRIM49BA6NDI0 452 aa11.98□□□□□ -0.49
COL6A3-213ENST00000493475 EIF4E1BA6NMX2 242 aaKnown RBP11.98□□□□□ -0.49
COL6A3-213ENST00000493475 GOLGA8CPA6NN73 597 aa11.98□□□□□ -0.49
COL6A3-213ENST00000493475 E9PAM4 449 aa11.98□□□□□ -0.49
COL6A3-213ENST00000493475 PIK3R2O00459 728 aa11.98□□□□□ -0.49
COL6A3-213ENST00000493475 VILLO15195 856 aa11.98□□□□□ -0.49
COL6A3-213ENST00000493475 AFPP02771 609 aaKnown RBP11.98□□□□□ -0.49
COL6A3-213ENST00000493475 C5AR1P21730 350 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms