RNA–Protein interactions for RNA: ENST00000491183.5

HMGN1-219, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 527 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-219ENST00000491183 NFE2L3Q9Y4A8 694 aa18.63■□□□□ 0.57
HMGN1-219ENST00000491183 METTL12A8MUP2 240 aa18.62■□□□□ 0.57
HMGN1-219ENST00000491183 HSF2BPO75031 334 aa18.62■□□□□ 0.57
HMGN1-219ENST00000491183 CSRP1P21291 193 aaKnown RBP18.62■□□□□ 0.57
HMGN1-219ENST00000491183 EEF1GP26641 437 aaKnown RBP18.62■□□□□ 0.57
HMGN1-219ENST00000491183 PMLP29590 882 aa18.62■□□□□ 0.57
HMGN1-219ENST00000491183 NOVA1P51513 510 aaKnown RBP18.62■□□□□ 0.57
HMGN1-219ENST00000491183 BPIFB4P59827 614 aa18.62■□□□□ 0.57
HMGN1-219ENST00000491183 RPS14P62263 151 aaKnown RBP18.62■□□□□ 0.57
HMGN1-219ENST00000491183 SLC6A3Q01959 620 aa18.62■□□□□ 0.57
HMGN1-219ENST00000491183 CDH18Q13634 790 aa18.62■□□□□ 0.57
HMGN1-219ENST00000491183 RAPGEF1Q13905 1077 aa18.62■□□□□ 0.57
HMGN1-219ENST00000491183 PITRM1Q5JRX3 1037 aa18.62■□□□□ 0.57
HMGN1-219ENST00000491183 SH3PXD2AQ5TCZ1 1133 aa18.62■□□□□ 0.57
HMGN1-219ENST00000491183 RBM43Q6ZSC3 357 aaKnown RBP18.62■□□□□ 0.57
HMGN1-219ENST00000491183 RABEPKQ7Z6M1 372 aa18.62■□□□□ 0.57
HMGN1-219ENST00000491183 FAM124AQ86V42 546 aa18.62■□□□□ 0.57
HMGN1-219ENST00000491183 APCDD1Q8J025 514 aa18.62■□□□□ 0.57
HMGN1-219ENST00000491183 OR2I1PQ8NGU4 316 aa18.62■□□□□ 0.57
HMGN1-219ENST00000491183 NOX5Q96PH1 765 aa18.62■□□□□ 0.57
HMGN1-219ENST00000491183 GTPBP2Q9BX10 602 aaKnown RBP18.62■□□□□ 0.57
HMGN1-219ENST00000491183 FAM204AQ9H8W3 233 aa18.62■□□□□ 0.57
HMGN1-219ENST00000491183 TAB2Q9NYJ8 693 aa18.62■□□□□ 0.57
HMGN1-219ENST00000491183 NUMA1Q14980 2115 aa18.62■□□□□ 0.57
HMGN1-219ENST00000491183 SYNJ2BP-COX16A0A087WUM0 186 aa18.61■□□□□ 0.57
HMGN1-219ENST00000491183 H0Y626 953 aa18.61■□□□□ 0.57
HMGN1-219ENST00000491183 PES1O00541 588 aaKnown RBP18.61■□□□□ 0.57
HMGN1-219ENST00000491183 ARHGAP33O14559 1287 aa18.61■□□□□ 0.57
HMGN1-219ENST00000491183 ASLP04424 464 aa18.61■□□□□ 0.57
HMGN1-219ENST00000491183 UCHL3P15374 230 aa18.61■□□□□ 0.57
HMGN1-219ENST00000491183 CYP11B1P15538 503 aa18.61■□□□□ 0.57
HMGN1-219ENST00000491183 CDH5P33151 784 aaPredicted RBP18.61■□□□□ 0.57
HMGN1-219ENST00000491183 CTSOP43234 321 aaPredicted RBP18.61■□□□□ 0.57
HMGN1-219ENST00000491183 WDR45BQ5MNZ6 344 aa18.61■□□□□ 0.57
HMGN1-219ENST00000491183 SLC26A9Q7LBE3 791 aa18.61■□□□□ 0.57
HMGN1-219ENST00000491183 ADAM33Q9BZ11 813 aa18.61■□□□□ 0.57
HMGN1-219ENST00000491183 COX16Q9P0S2 106 aa18.61■□□□□ 0.57
HMGN1-219ENST00000491183 KIAA1522Q9P206 1035 aaPredicted RBP18.61■□□□□ 0.57
HMGN1-219ENST00000491183 SLC12A6Q9UHW9 1150 aa18.61■□□□□ 0.57
HMGN1-219ENST00000491183 F5H5T6 163 aa18.6■□□□□ 0.57
HMGN1-219ENST00000491183 DAB1O75553 588 aa18.6■□□□□ 0.57
HMGN1-219ENST00000491183 SLC2A3P11169 496 aa18.6■□□□□ 0.57
HMGN1-219ENST00000491183 ABCB4P21439 1286 aa18.6■□□□□ 0.57
HMGN1-219ENST00000491183 CCR1P32246 355 aa18.6■□□□□ 0.57
HMGN1-219ENST00000491183 ACSL1P33121 698 aa18.6■□□□□ 0.57
HMGN1-219ENST00000491183 NOS2P35228 1153 aa18.6■□□□□ 0.57
HMGN1-219ENST00000491183 SEMA3BQ13214 749 aa18.6■□□□□ 0.57
HMGN1-219ENST00000491183 PLEKHG6Q3KR16 790 aa18.6■□□□□ 0.57
HMGN1-219ENST00000491183 DCAF12L1Q5VU92 463 aa18.6■□□□□ 0.57
HMGN1-219ENST00000491183 OTUD1Q5VV17 481 aaPredicted RBP18.6■□□□□ 0.57
HMGN1-219ENST00000491183 CDKAL1Q5VV42 579 aa18.6■□□□□ 0.57
HMGN1-219ENST00000491183 CIR1Q86X95 450 aaPredicted RBP18.6■□□□□ 0.57
HMGN1-219ENST00000491183 CCDC117Q8IWD4 279 aaPredicted RBP18.6■□□□□ 0.57
HMGN1-219ENST00000491183 CCAR2Q8N163 923 aaKnown RBP18.6■□□□□ 0.57
HMGN1-219ENST00000491183 TMEM35BQ8NCS4 154 aa18.6■□□□□ 0.57
HMGN1-219ENST00000491183 DEFB124Q8NES8 71 aa18.6■□□□□ 0.57
HMGN1-219ENST00000491183 ZNF397Q8NF99 534 aaPredicted RBP18.6■□□□□ 0.57
HMGN1-219ENST00000491183 RNF34Q969K3 372 aa18.6■□□□□ 0.57
HMGN1-219ENST00000491183 VPS16Q9H269 839 aa18.6■□□□□ 0.57
HMGN1-219ENST00000491183 FBRSQ9HAH7 460 aa18.6■□□□□ 0.57
HMGN1-219ENST00000491183 SLCO3A1Q9UIG8 710 aa18.6■□□□□ 0.57
HMGN1-219ENST00000491183 ERVW-1Q9UQF0 538 aa18.6■□□□□ 0.57
HMGN1-219ENST00000491183 FAM170AA1A519 330 aa18.59■□□□□ 0.57
HMGN1-219ENST00000491183 MEI4A8MW99 385 aa18.59■□□□□ 0.57
HMGN1-219ENST00000491183 M0QYT0 321 aa18.59■□□□□ 0.57
HMGN1-219ENST00000491183 SIN3BO75182 1162 aa18.59■□□□□ 0.57
HMGN1-219ENST00000491183 CEACAM1P13688 526 aa18.59■□□□□ 0.57
HMGN1-219ENST00000491183 GNSP15586 552 aa18.59■□□□□ 0.57
HMGN1-219ENST00000491183 TFE3P19532 575 aaPredicted RBP18.59■□□□□ 0.57
HMGN1-219ENST00000491183 GABRB2P47870 512 aa18.59■□□□□ 0.57
HMGN1-219ENST00000491183 KLK7P49862 253 aa18.59■□□□□ 0.57
HMGN1-219ENST00000491183 ATXN3P54252 364 aaPredicted RBP18.59■□□□□ 0.57
HMGN1-219ENST00000491183 SNX16P57768 344 aa18.59■□□□□ 0.57
HMGN1-219ENST00000491183 ST8SIA6P61647 398 aa18.59■□□□□ 0.57
HMGN1-219ENST00000491183 ZBTB16Q05516 673 aa18.59■□□□□ 0.57
HMGN1-219ENST00000491183 NME3Q13232 169 aa18.59■□□□□ 0.57
HMGN1-219ENST00000491183 ARID5BQ14865 1188 aa18.59■□□□□ 0.57
HMGN1-219ENST00000491183 HNRNPA1L2Q32P51 320 aaKnown RBP18.59■□□□□ 0.57
HMGN1-219ENST00000491183 TAF3Q5VWG9 929 aa18.59■□□□□ 0.57
HMGN1-219ENST00000491183 FBXL22Q6P050 247 aa18.59■□□□□ 0.57
HMGN1-219ENST00000491183 PIP4P1Q86T03 277 aa18.59■□□□□ 0.57
HMGN1-219ENST00000491183 NOP9Q86U38 636 aaKnown RBP18.59■□□□□ 0.57
HMGN1-219ENST00000491183 MINDY1Q8N5J2 469 aa18.59■□□□□ 0.57
HMGN1-219ENST00000491183 KDM1BQ8NB78 822 aa18.59■□□□□ 0.57
HMGN1-219ENST00000491183 C1orf216Q8TAB5 229 aa18.59■□□□□ 0.57
HMGN1-219ENST00000491183 IGSF8Q969P0 613 aa18.59■□□□□ 0.57
HMGN1-219ENST00000491183 NPY6RQ99463 290 aa18.59■□□□□ 0.57
HMGN1-219ENST00000491183 STK33Q9BYT3 514 aa18.59■□□□□ 0.57
HMGN1-219ENST00000491183 RSPH9Q9H1X1 276 aaPredicted RBP18.59■□□□□ 0.57
HMGN1-219ENST00000491183 GANQ9H2C0 597 aa18.59■□□□□ 0.57
HMGN1-219ENST00000491183 PDCL3Q9H2J4 239 aa18.59■□□□□ 0.57
HMGN1-219ENST00000491183 C6orf106Q9H6K1 298 aaPredicted RBP18.59■□□□□ 0.57
HMGN1-219ENST00000491183 SYNCQ9H7C4 482 aa18.59■□□□□ 0.57
HMGN1-219ENST00000491183 SUSD2Q9UGT4 822 aa18.59■□□□□ 0.57
HMGN1-219ENST00000491183 CEP83Q9Y592 693 aa18.59■□□□□ 0.57
HMGN1-219ENST00000491183 PCNX2A6NKB5 2137 aa18.58■□□□□ 0.57
HMGN1-219ENST00000491183 A0A1B0GTW7 788 aa18.58■□□□□ 0.56
HMGN1-219ENST00000491183 TTC34A8MYJ7 566 aa18.58■□□□□ 0.56
HMGN1-219ENST00000491183 SRPRAP08240 638 aaKnown RBP18.58■□□□□ 0.56
HMGN1-219ENST00000491183 SYPP08247 313 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms