RNA–Protein interactions for RNA: ENST00000491106.1

SNRNP40-207, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 459 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-207ENST00000491106 HMGB2P26583 209 aaKnown RBP2.2□□□□□ -2.06
SNRNP40-207ENST00000491106 TNFRSF8P28908 595 aa2.2□□□□□ -2.06
SNRNP40-207ENST00000491106 MPGP29372 298 aa2.2□□□□□ -2.06
SNRNP40-207ENST00000491106 CD6P30203 668 aa2.2□□□□□ -2.06
SNRNP40-207ENST00000491106 HNRNPH1P31943 449 aaKnown RBP2.2□□□□□ -2.06
SNRNP40-207ENST00000491106 STAT6P42226 847 aa2.2□□□□□ -2.06
SNRNP40-207ENST00000491106 MTIF2P46199 727 aaKnown RBP2.2□□□□□ -2.06
SNRNP40-207ENST00000491106 NDUFV1P49821 464 aa2.2□□□□□ -2.06
SNRNP40-207ENST00000491106 CCT8P50990 548 aa2.2□□□□□ -2.06
SNRNP40-207ENST00000491106 ANXA11P50995 505 aaKnown RBP2.2□□□□□ -2.06
SNRNP40-207ENST00000491106 MRPL12P52815 198 aaKnown RBP2.2□□□□□ -2.06
SNRNP40-207ENST00000491106 GSCP56915 257 aaPredicted RBP2.2□□□□□ -2.06
SNRNP40-207ENST00000491106 VSNL1P62760 191 aa2.2□□□□□ -2.06
SNRNP40-207ENST00000491106 GSTO1P78417 241 aa2.2□□□□□ -2.06
SNRNP40-207ENST00000491106 FKBP3Q00688 224 aaKnown RBP2.2□□□□□ -2.06
SNRNP40-207ENST00000491106 SETQ01105 290 aaPredicted RBP2.2□□□□□ -2.06
SNRNP40-207ENST00000491106 TFAP4Q01664 338 aa2.2□□□□□ -2.06
SNRNP40-207ENST00000491106 LRRC63Q05C16 580 aa2.2□□□□□ -2.06
SNRNP40-207ENST00000491106 CHRNDQ07001 517 aa2.2□□□□□ -2.06
SNRNP40-207ENST00000491106 KRTAP1-1Q07627 177 aa2.2□□□□□ -2.06
SNRNP40-207ENST00000491106 GOLGA8FQ08AF8 430 aa2.2□□□□□ -2.06
SNRNP40-207ENST00000491106 GOLGA8DPQ0D2H9 430 aa2.2□□□□□ -2.06
SNRNP40-207ENST00000491106 TARDBPQ13148 414 aaKnown RBP eCLIP2.2□□□□□ -2.06
SNRNP40-207ENST00000491106 BMPR2Q13873 1038 aa2.2□□□□□ -2.06
SNRNP40-207ENST00000491106 HLXQ14774 488 aaPredicted RBP2.2□□□□□ -2.06
SNRNP40-207ENST00000491106 MTF1Q14872 753 aa2.2□□□□□ -2.06
SNRNP40-207ENST00000491106 PCBP2Q15366 365 aaKnown RBP eCLIP2.2□□□□□ -2.06
SNRNP40-207ENST00000491106 NAB2Q15742 525 aa2.2□□□□□ -2.06
SNRNP40-207ENST00000491106 ASTE1Q2TB18 679 aaPredicted RBP2.2□□□□□ -2.06
SNRNP40-207ENST00000491106 TTC31Q49AM3 519 aaPredicted RBP2.2□□□□□ -2.06
SNRNP40-207ENST00000491106 SLC9C1Q4G0N8 1177 aa2.2□□□□□ -2.06
SNRNP40-207ENST00000491106 FLYWCH1Q4VC44 716 aa2.2□□□□□ -2.06
SNRNP40-207ENST00000491106 HSP90AA4PQ58FG1 418 aa2.2□□□□□ -2.06
SNRNP40-207ENST00000491106 MTX3Q5HYI7 312 aa2.2□□□□□ -2.06
SNRNP40-207ENST00000491106 PCID2Q5JVF3 399 aa2.2□□□□□ -2.06
SNRNP40-207ENST00000491106 SPDYCQ5MJ68 293 aa2.2□□□□□ -2.06
SNRNP40-207ENST00000491106 DACT2Q5SW24 774 aa2.2□□□□□ -2.06
SNRNP40-207ENST00000491106 CFAP58Q5T655 872 aa2.2□□□□□ -2.06
SNRNP40-207ENST00000491106 THEMIS2Q5TEJ8 643 aa2.2□□□□□ -2.06
SNRNP40-207ENST00000491106 CCDC181Q5TID7 509 aa2.2□□□□□ -2.06
SNRNP40-207ENST00000491106 SYDE2Q5VT97 1194 aa2.2□□□□□ -2.06
SNRNP40-207ENST00000491106 SUSD4Q5VX71 490 aa2.2□□□□□ -2.06
SNRNP40-207ENST00000491106 ICE2Q659A1 982 aa2.2□□□□□ -2.06
SNRNP40-207ENST00000491106 ANKRD40Q6AI12 368 aa2.2□□□□□ -2.06
SNRNP40-207ENST00000491106 TTI2Q6NXR4 508 aa2.2□□□□□ -2.06
SNRNP40-207ENST00000491106 LRIG3Q6UXM1 1119 aa2.2□□□□□ -2.06
SNRNP40-207ENST00000491106 ZNF788Q6ZQV5 615 aa2.2□□□□□ -2.06
SNRNP40-207ENST00000491106 SLC29A4Q7RTT9 530 aa2.2□□□□□ -2.06
SNRNP40-207ENST00000491106 MAATS1Q7Z4T9 603 aa2.2□□□□□ -2.06
SNRNP40-207ENST00000491106 CCDC91Q7Z6B0 441 aa2.2□□□□□ -2.06
SNRNP40-207ENST00000491106 PRIMA1Q86XR5 153 aa2.2□□□□□ -2.06
SNRNP40-207ENST00000491106 TBC1D10CQ8IV04 446 aa2.2□□□□□ -2.06
SNRNP40-207ENST00000491106 ANKRD18AQ8IVF6 992 aa2.2□□□□□ -2.06
SNRNP40-207ENST00000491106 ADGRG5Q8IZF4 528 aa2.2□□□□□ -2.06
SNRNP40-207ENST00000491106 GUF1Q8N442 669 aaKnown RBP2.2□□□□□ -2.06
SNRNP40-207ENST00000491106 LRRC71Q8N4P6 559 aa2.2□□□□□ -2.06
SNRNP40-207ENST00000491106 CSGALNACT2Q8N6G5 542 aa2.2□□□□□ -2.06
SNRNP40-207ENST00000491106 ENAHQ8N8S7 591 aaPredicted RBP2.2□□□□□ -2.06
SNRNP40-207ENST00000491106 C1orf162Q8NEQ5 155 aaPredicted RBP2.2□□□□□ -2.06
SNRNP40-207ENST00000491106 TMIEQ8NEW7 156 aa2.2□□□□□ -2.06
SNRNP40-207ENST00000491106 CCDC26Q8TAB7 109 aa2.2□□□□□ -2.06
SNRNP40-207ENST00000491106 MYCBPAPQ8TBZ2 947 aa2.2□□□□□ -2.06
SNRNP40-207ENST00000491106 MAGEC3Q8TD91 643 aa2.2□□□□□ -2.06
SNRNP40-207ENST00000491106 BCAS4Q8TDM0 211 aa2.2□□□□□ -2.06
SNRNP40-207ENST00000491106 IPO4Q8TEX9 1081 aaKnown RBP2.2□□□□□ -2.06
SNRNP40-207ENST00000491106 SCFD2Q8WU76 684 aa2.2□□□□□ -2.06
SNRNP40-207ENST00000491106 XAGE5Q8WWM1 108 aa2.2□□□□□ -2.06
SNRNP40-207ENST00000491106 PIGBQ92521 554 aa2.2□□□□□ -2.06
SNRNP40-207ENST00000491106 STAMQ92783 540 aa2.2□□□□□ -2.06
SNRNP40-207ENST00000491106 P2RX5Q93086 422 aa2.2□□□□□ -2.06
SNRNP40-207ENST00000491106 JAKMIP2Q96AA8 810 aa2.2□□□□□ -2.06
SNRNP40-207ENST00000491106 FKBP10Q96AY3 582 aa2.2□□□□□ -2.06
SNRNP40-207ENST00000491106 CENPTQ96BT3 561 aa2.2□□□□□ -2.06
SNRNP40-207ENST00000491106 FAM84BQ96KN1 310 aaPredicted RBP2.2□□□□□ -2.06
SNRNP40-207ENST00000491106 KLHL32Q96NJ5 620 aa2.2□□□□□ -2.06
SNRNP40-207ENST00000491106 MMS19Q96T76 1030 aa2.2□□□□□ -2.06
SNRNP40-207ENST00000491106 NAP1L4Q99733 375 aaKnown RBP2.2□□□□□ -2.06
SNRNP40-207ENST00000491106 DESI2Q9BSY9 194 aa2.2□□□□□ -2.06
SNRNP40-207ENST00000491106 LRRC1Q9BTT6 524 aa2.2□□□□□ -2.06
SNRNP40-207ENST00000491106 DPCDQ9BVM2 203 aaPredicted RBP2.2□□□□□ -2.06
SNRNP40-207ENST00000491106 RAB34Q9BZG1 259 aa2.2□□□□□ -2.06
SNRNP40-207ENST00000491106 CRNKL1Q9BZJ0 848 aaKnown RBP2.2□□□□□ -2.06
SNRNP40-207ENST00000491106 TTYH3Q9C0H2 523 aa2.2□□□□□ -2.06
SNRNP40-207ENST00000491106 ZMYND12Q9H0C1 365 aa2.2□□□□□ -2.06
SNRNP40-207ENST00000491106 GLT8D2Q9H1C3 349 aa2.2□□□□□ -2.06
SNRNP40-207ENST00000491106 NDST4Q9H3R1 872 aa2.2□□□□□ -2.06
SNRNP40-207ENST00000491106 KAT14Q9H8E8 782 aa2.2□□□□□ -2.06
SNRNP40-207ENST00000491106 FAM204AQ9H8W3 233 aa2.2□□□□□ -2.06
SNRNP40-207ENST00000491106 C6orf50Q9HD87 102 aa2.2□□□□□ -2.06
SNRNP40-207ENST00000491106 GDF3Q9NR23 364 aa2.2□□□□□ -2.06
SNRNP40-207ENST00000491106 ARHGEF3Q9NR81 526 aa2.2□□□□□ -2.06
SNRNP40-207ENST00000491106 AGPAT5Q9NUQ2 364 aa2.2□□□□□ -2.06
SNRNP40-207ENST00000491106 GEMIN8Q9NWZ8 242 aaKnown RBP2.2□□□□□ -2.06
SNRNP40-207ENST00000491106 GOLGA6AQ9NYA3 693 aa2.2□□□□□ -2.06
SNRNP40-207ENST00000491106 AIPL1Q9NZN9 384 aa2.2□□□□□ -2.06
SNRNP40-207ENST00000491106 FAM30AQ9NZY2 134 aa2.2□□□□□ -2.06
SNRNP40-207ENST00000491106 VPS54Q9P1Q0 977 aa2.2□□□□□ -2.06
SNRNP40-207ENST00000491106 NIPSNAP3AQ9UFN0 247 aaPredicted RBP2.2□□□□□ -2.06
SNRNP40-207ENST00000491106 ABCF2Q9UG63 623 aa2.2□□□□□ -2.06
SNRNP40-207ENST00000491106 SWAP70Q9UH65 585 aa2.2□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms