RNA–Protein interactions for RNA: ENST00000490398.5

COL9A3-214, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 4

Gene COL9A3, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-214ENST00000490398 UCMAQ8WVF2 138 aa18.74■□□□□ 0.59
COL9A3-214ENST00000490398 RMDN1Q96DB5 314 aa18.74■□□□□ 0.59
COL9A3-214ENST00000490398 MYO19Q96H55 970 aa18.74■□□□□ 0.59
COL9A3-214ENST00000490398 SYT11Q9BT88 431 aa18.74■□□□□ 0.59
COL9A3-214ENST00000490398 TKTL2Q9H0I9 626 aa18.74■□□□□ 0.59
COL9A3-214ENST00000490398 TMEM245Q9H330 911 aa18.74■□□□□ 0.59
COL9A3-214ENST00000490398 ARHGEF38Q9NXL2 777 aa18.74■□□□□ 0.59
COL9A3-214ENST00000490398 VANGL2Q9ULK5 521 aa18.74■□□□□ 0.59
COL9A3-214ENST00000490398 CYP8B1Q9UNU6 501 aa18.74■□□□□ 0.59
COL9A3-214ENST00000490398 CEP250Q9BV73 2442 aa18.74■□□□□ 0.59
COL9A3-214ENST00000490398 ABCA7Q8IZY2 2146 aa18.73■□□□□ 0.59
COL9A3-214ENST00000490398 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa18.73■□□□□ 0.59
COL9A3-214ENST00000490398 LRRC53A6NM62 1247 aa18.73■□□□□ 0.59
COL9A3-214ENST00000490398 TIMM44O43615 452 aa18.73■□□□□ 0.59
COL9A3-214ENST00000490398 GDF9O60383 454 aa18.73■□□□□ 0.59
COL9A3-214ENST00000490398 EPHX1P07099 455 aa18.73■□□□□ 0.59
COL9A3-214ENST00000490398 CSKP41240 450 aa18.73■□□□□ 0.59
COL9A3-214ENST00000490398 PTGER3P43115 390 aa18.73■□□□□ 0.59
COL9A3-214ENST00000490398 FANCCQ00597 558 aa18.73■□□□□ 0.59
COL9A3-214ENST00000490398 DEUP1Q05D60 604 aa18.73■□□□□ 0.59
COL9A3-214ENST00000490398 C15orf59Q2T9L4 293 aaPredicted RBP18.73■□□□□ 0.59
COL9A3-214ENST00000490398 SLC25A52Q3SY17 297 aa18.73■□□□□ 0.59
COL9A3-214ENST00000490398 TCEAL6Q6IPX3 200 aa18.73■□□□□ 0.59
COL9A3-214ENST00000490398 SERPINA13PQ6UXR4 307 aa18.73■□□□□ 0.59
COL9A3-214ENST00000490398 ARMCX6Q7L4S7 300 aa18.73■□□□□ 0.59
COL9A3-214ENST00000490398 CACUL1Q86Y37 369 aa18.73■□□□□ 0.59
COL9A3-214ENST00000490398 TMEFF1Q8IYR6 380 aa18.73■□□□□ 0.59
COL9A3-214ENST00000490398 CCAR2Q8N163 923 aaKnown RBP18.73■□□□□ 0.59
COL9A3-214ENST00000490398 TCEAL3Q969E4 200 aa18.73■□□□□ 0.59
COL9A3-214ENST00000490398 TTC17Q96AE7 1141 aa18.73■□□□□ 0.59
COL9A3-214ENST00000490398 PGAP3Q96FM1 320 aaPredicted RBP18.73■□□□□ 0.59
COL9A3-214ENST00000490398 LOXL4Q96JB6 756 aa18.73■□□□□ 0.59
COL9A3-214ENST00000490398 MRGPRX3Q96LB0 322 aa18.73■□□□□ 0.59
COL9A3-214ENST00000490398 TTYH3Q9C0H2 523 aa18.73■□□□□ 0.59
COL9A3-214ENST00000490398 SIK2Q9H0K1 926 aa18.73■□□□□ 0.59
COL9A3-214ENST00000490398 RXFP3Q9NSD7 469 aa18.73■□□□□ 0.59
COL9A3-214ENST00000490398 SEPT11Q9NVA2 429 aaKnown RBP18.73■□□□□ 0.59
COL9A3-214ENST00000490398 TAS2R14Q9NYV8 317 aa18.73■□□□□ 0.59
COL9A3-214ENST00000490398 SLC12A6Q9UHW9 1150 aa18.73■□□□□ 0.59
COL9A3-214ENST00000490398 IGHV1OR15-9A0A0B4J2B8 117 aa18.72■□□□□ 0.59
COL9A3-214ENST00000490398 A0A1W2PQC6 194 aa18.72■□□□□ 0.59
COL9A3-214ENST00000490398 H0Y626 953 aa18.72■□□□□ 0.59
COL9A3-214ENST00000490398 CNTN5O94779 1100 aa18.72■□□□□ 0.59
COL9A3-214ENST00000490398 RHOBTB1O94844 696 aa18.72■□□□□ 0.59
COL9A3-214ENST00000490398 SERPINC1P01008 464 aa18.72■□□□□ 0.59
COL9A3-214ENST00000490398 DLDP09622 509 aaKnown RBP18.72■□□□□ 0.59
COL9A3-214ENST00000490398 SLC2A3P11169 496 aa18.72■□□□□ 0.59
COL9A3-214ENST00000490398 MZF1P28698 734 aaPredicted RBP18.72■□□□□ 0.59
COL9A3-214ENST00000490398 CDH18Q13634 790 aa18.72■□□□□ 0.59
COL9A3-214ENST00000490398 ELF2Q15723 593 aa18.72■□□□□ 0.59
COL9A3-214ENST00000490398 CSRP2Q16527 193 aa18.72■□□□□ 0.59
COL9A3-214ENST00000490398 CCDC14Q49A88 953 aa18.72■□□□□ 0.59
COL9A3-214ENST00000490398 FILIP1LQ4L180 1135 aa18.72■□□□□ 0.59
COL9A3-214ENST00000490398 FNDC3BQ53EP0 1204 aaKnown RBP18.72■□□□□ 0.59
COL9A3-214ENST00000490398 PITRM1Q5JRX3 1037 aa18.72■□□□□ 0.59
COL9A3-214ENST00000490398 PLA2G2CQ5R387 149 aa18.72■□□□□ 0.59
COL9A3-214ENST00000490398 CXorf57Q6NSI4 855 aaKnown RBP18.72■□□□□ 0.59
COL9A3-214ENST00000490398 KIAA1324Q6UXG2 1013 aaKnown RBP18.72■□□□□ 0.59
COL9A3-214ENST00000490398 TRIM72Q6ZMU5 477 aa18.72■□□□□ 0.59
COL9A3-214ENST00000490398 PHF13Q86YI8 300 aaPredicted RBP18.72■□□□□ 0.59
COL9A3-214ENST00000490398 ZNF683Q8IZ20 524 aa18.72■□□□□ 0.59
COL9A3-214ENST00000490398 RXFP2Q8WXD0 754 aa18.72■□□□□ 0.59
COL9A3-214ENST00000490398 MAGEB5Q9BZ81 275 aa18.72■□□□□ 0.59
COL9A3-214ENST00000490398 WDCPQ9H6R7 721 aa18.72■□□□□ 0.59
COL9A3-214ENST00000490398 RRN3Q9NYV6 651 aa18.72■□□□□ 0.59
COL9A3-214ENST00000490398 ADAM22Q9P0K1 906 aa18.72■□□□□ 0.59
COL9A3-214ENST00000490398 STAP1Q9ULZ2 295 aa18.72■□□□□ 0.59
COL9A3-214ENST00000490398 NPC1O15118 1278 aa18.71■□□□□ 0.59
COL9A3-214ENST00000490398 PDGFRAP16234 1089 aa18.71■□□□□ 0.59
COL9A3-214ENST00000490398 FERP16591 822 aa18.71■□□□□ 0.59
COL9A3-214ENST00000490398 POLR2EP19388 210 aaKnown RBP18.71■□□□□ 0.59
COL9A3-214ENST00000490398 MPLP40238 635 aa18.71■□□□□ 0.59
COL9A3-214ENST00000490398 PBX1P40424 430 aa18.71■□□□□ 0.59
COL9A3-214ENST00000490398 DHPSP49366 369 aaPredicted RBP18.71■□□□□ 0.59
COL9A3-214ENST00000490398 ATP11AP98196 1134 aa18.71■□□□□ 0.59
COL9A3-214ENST00000490398 CREB5Q02930 508 aa18.71■□□□□ 0.59
COL9A3-214ENST00000490398 STARD3Q14849 445 aa18.71■□□□□ 0.59
COL9A3-214ENST00000490398 ALFQ53S48 1182 aa18.71■□□□□ 0.59
COL9A3-214ENST00000490398 PRR23CQ6ZRP0 262 aa18.71■□□□□ 0.59
COL9A3-214ENST00000490398 MON1BQ7L1V2 547 aa18.71■□□□□ 0.59
COL9A3-214ENST00000490398 FAM131BQ86XD5 332 aa18.71■□□□□ 0.59
COL9A3-214ENST00000490398 MSANTD4Q8NCY6 345 aa18.71■□□□□ 0.59
COL9A3-214ENST00000490398 RPRD1AQ96P16 312 aaPredicted RBP18.71■□□□□ 0.59
COL9A3-214ENST00000490398 PRDM16Q9HAZ2 1276 aa18.71■□□□□ 0.59
COL9A3-214ENST00000490398 TCRBV5S1A1TA0A578 114 aa18.7■□□□□ 0.58
COL9A3-214ENST00000490398 BCLAF3A2AJT9 711 aaKnown RBP18.7■□□□□ 0.58
COL9A3-214ENST00000490398 TYW5A2RUC4 315 aaKnown RBP18.7■□□□□ 0.58
COL9A3-214ENST00000490398 C2CD4BA6NLJ0 364 aa18.7■□□□□ 0.58
COL9A3-214ENST00000490398 MAP3K13O43283 966 aa18.7■□□□□ 0.58
COL9A3-214ENST00000490398 ENDOD1O94919 500 aa18.7■□□□□ 0.58
COL9A3-214ENST00000490398 RFC1P35251 1148 aaPredicted RBP18.7■□□□□ 0.58
COL9A3-214ENST00000490398 NSFP46459 744 aaKnown RBP18.7■□□□□ 0.58
COL9A3-214ENST00000490398 CDO1Q16878 200 aa18.7■□□□□ 0.58
COL9A3-214ENST00000490398 RSPO4Q2I0M5 234 aaPredicted RBP18.7■□□□□ 0.58
COL9A3-214ENST00000490398 PLEKHG6Q3KR16 790 aa18.7■□□□□ 0.58
COL9A3-214ENST00000490398 BRMS1LQ5PSV4 323 aa18.7■□□□□ 0.58
COL9A3-214ENST00000490398 TMPRSS6Q8IU80 811 aa18.7■□□□□ 0.58
COL9A3-214ENST00000490398 SPACA7Q96KW9 195 aa18.7■□□□□ 0.58
COL9A3-214ENST00000490398 PRSS16Q9NQE7 514 aa18.7■□□□□ 0.58
COL9A3-214ENST00000490398 TMEM74BQ9NUR3 256 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms