RNA–Protein interactions for RNA: ENST00000490283.1

SEC13-218, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-218ENST00000490283 EPS8L1Q8TE68 723 aa18.05■□□□□ 0.48
SEC13-218ENST00000490283 MKRN2Q9H000 416 aaKnown RBP18.05■□□□□ 0.48
SEC13-218ENST00000490283 TMEM245Q9H330 911 aa18.05■□□□□ 0.48
SEC13-218ENST00000490283 NLRC4Q9NPP4 1024 aa18.05■□□□□ 0.48
SEC13-218ENST00000490283 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.05■□□□□ 0.48
SEC13-218ENST00000490283 LIMA1Q9UHB6 759 aaKnown RBP18.05■□□□□ 0.48
SEC13-218ENST00000490283 EVLQ9UI08 416 aaPredicted RBP18.05■□□□□ 0.48
SEC13-218ENST00000490283 XPO7Q9UIA9 1087 aaKnown RBP18.05■□□□□ 0.48
SEC13-218ENST00000490283 LGALS16A8MUM7 142 aa18.04■□□□□ 0.48
SEC13-218ENST00000490283 ITPKAP23677 461 aa18.04■□□□□ 0.48
SEC13-218ENST00000490283 SOX5P35711 763 aa18.04■□□□□ 0.48
SEC13-218ENST00000490283 STAT1P42224 750 aa18.04■□□□□ 0.48
SEC13-218ENST00000490283 KLK7P49862 253 aa18.04■□□□□ 0.48
SEC13-218ENST00000490283 UBXN1Q04323 297 aa18.04■□□□□ 0.48
SEC13-218ENST00000490283 CAMK2GQ13555 558 aaPredicted RBP18.04■□□□□ 0.48
SEC13-218ENST00000490283 SYCP1Q15431 976 aa18.04■□□□□ 0.48
SEC13-218ENST00000490283 WDR45BQ5MNZ6 344 aa18.04■□□□□ 0.48
SEC13-218ENST00000490283 DAB2IPQ5VWQ8 1189 aa18.04■□□□□ 0.48
SEC13-218ENST00000490283 CACUL1Q86Y37 369 aa18.04■□□□□ 0.48
SEC13-218ENST00000490283 RGL4Q8IZJ4 473 aa18.04■□□□□ 0.48
SEC13-218ENST00000490283 HSPA12BQ96MM6 686 aa18.04■□□□□ 0.48
SEC13-218ENST00000490283 PPP1R9BQ96SB3 815 aa18.04■□□□□ 0.48
SEC13-218ENST00000490283 TMEM9BQ9NQ34 198 aa18.04■□□□□ 0.48
SEC13-218ENST00000490283 ITM2CQ9NQX7 267 aa18.04■□□□□ 0.48
SEC13-218ENST00000490283 RXFP3Q9NSD7 469 aa18.04■□□□□ 0.48
SEC13-218ENST00000490283 USP36Q9P275 1121 aaKnown RBP18.04■□□□□ 0.48
SEC13-218ENST00000490283 ATXN2Q99700 1313 aaKnown RBP18.03■□□□□ 0.48
SEC13-218ENST00000490283 THADAQ6YHU6 1953 aa18.03■□□□□ 0.48
SEC13-218ENST00000490283 A0A1B0GVM2 712 aa18.03■□□□□ 0.48
SEC13-218ENST00000490283 LNP1A1A4G5 178 aa18.03■□□□□ 0.48
SEC13-218ENST00000490283 TCAF2A6NFQ2 919 aa18.03■□□□□ 0.48
SEC13-218ENST00000490283 MEI4A8MW99 385 aa18.03■□□□□ 0.48
SEC13-218ENST00000490283 F9P00740 461 aa18.03■□□□□ 0.48
SEC13-218ENST00000490283 CFIP05156 583 aa18.03■□□□□ 0.48
SEC13-218ENST00000490283 MMEP08473 750 aa18.03■□□□□ 0.48
SEC13-218ENST00000490283 CSKP41240 450 aa18.03■□□□□ 0.48
SEC13-218ENST00000490283 GABRB2P47870 512 aa18.03■□□□□ 0.48
SEC13-218ENST00000490283 SULT1E1P49888 294 aa18.03■□□□□ 0.48
SEC13-218ENST00000490283 COPAP53621 1224 aa18.03■□□□□ 0.48
SEC13-218ENST00000490283 EIF4EBP2Q13542 120 aaPredicted RBP18.03■□□□□ 0.48
SEC13-218ENST00000490283 SLC12A1Q13621 1099 aa18.03■□□□□ 0.48
SEC13-218ENST00000490283 PTPRNQ16849 979 aa18.03■□□□□ 0.48
SEC13-218ENST00000490283 DUOXA1Q1HG43 343 aa18.03■□□□□ 0.48
SEC13-218ENST00000490283 PITRM1Q5JRX3 1037 aa18.03■□□□□ 0.48
SEC13-218ENST00000490283 BRMS1LQ5PSV4 323 aa18.03■□□□□ 0.48
SEC13-218ENST00000490283 NAA35Q5VZE5 725 aa18.03■□□□□ 0.48
SEC13-218ENST00000490283 AOPEPQ8N6M6 819 aa18.03■□□□□ 0.48
SEC13-218ENST00000490283 ZNF366Q8N895 744 aa18.03■□□□□ 0.48
SEC13-218ENST00000490283 TTC17Q96AE7 1141 aa18.03■□□□□ 0.48
SEC13-218ENST00000490283 MYEOVQ96EZ4 313 aa18.03■□□□□ 0.48
SEC13-218ENST00000490283 TOE1Q96GM8 510 aaKnown RBP18.03■□□□□ 0.48
SEC13-218ENST00000490283 RPRD1AQ96P16 312 aaPredicted RBP18.03■□□□□ 0.48
SEC13-218ENST00000490283 NUP58Q9BVL2 599 aa18.03■□□□□ 0.48
SEC13-218ENST00000490283 SUSD2Q9UGT4 822 aa18.03■□□□□ 0.48
SEC13-218ENST00000490283 PILRBQ9UKJ0 227 aa18.03■□□□□ 0.48
SEC13-218ENST00000490283 ABCA7Q8IZY2 2146 aa18.02■□□□□ 0.48
SEC13-218ENST00000490283 PATE3B3GLJ2 98 aa18.02■□□□□ 0.48
SEC13-218ENST00000490283 GOLGA8SH3BPF8 625 aa18.02■□□□□ 0.48
SEC13-218ENST00000490283 RNASEH1O60930 286 aaKnown RBP18.02■□□□□ 0.48
SEC13-218ENST00000490283 DNTTP04053 509 aa18.02■□□□□ 0.48
SEC13-218ENST00000490283 SRPRAP08240 638 aaKnown RBP18.02■□□□□ 0.48
SEC13-218ENST00000490283 GNSP15586 552 aa18.02■□□□□ 0.48
SEC13-218ENST00000490283 NNMTP40261 264 aa18.02■□□□□ 0.48
SEC13-218ENST00000490283 TPMTP51580 245 aa18.02■□□□□ 0.48
SEC13-218ENST00000490283 ATXN3P54252 364 aaPredicted RBP18.02■□□□□ 0.48
SEC13-218ENST00000490283 NOMO3P69849 1222 aa18.02■□□□□ 0.48
SEC13-218ENST00000490283 CDR2Q01850 454 aa18.02■□□□□ 0.48
SEC13-218ENST00000490283 ZBTB16Q05516 673 aa18.02■□□□□ 0.48
SEC13-218ENST00000490283 DEUP1Q05D60 604 aa18.02■□□□□ 0.48
SEC13-218ENST00000490283 TTC31Q49AM3 519 aaPredicted RBP18.02■□□□□ 0.48
SEC13-218ENST00000490283 PPM1JQ5JR12 505 aa18.02■□□□□ 0.48
SEC13-218ENST00000490283 LRSAM1Q6UWE0 723 aa18.02■□□□□ 0.48
SEC13-218ENST00000490283 TRIM72Q6ZMU5 477 aa18.02■□□□□ 0.48
SEC13-218ENST00000490283 XYLT1Q86Y38 959 aa18.02■□□□□ 0.48
SEC13-218ENST00000490283 KDM1BQ8NB78 822 aa18.02■□□□□ 0.48
SEC13-218ENST00000490283 CPA5Q8WXQ8 436 aa18.02■□□□□ 0.48
SEC13-218ENST00000490283 WDCPQ9H6R7 721 aa18.02■□□□□ 0.48
SEC13-218ENST00000490283 CD93Q9NPY3 652 aa18.02■□□□□ 0.48
SEC13-218ENST00000490283 WSB2Q9NYS7 404 aaPredicted RBP18.02■□□□□ 0.48
SEC13-218ENST00000490283 SIK3Q9Y2K2 1263 aa18.02■□□□□ 0.48
SEC13-218ENST00000490283 MED19A0JLT2 244 aaPredicted RBP18.01■□□□□ 0.47
SEC13-218ENST00000490283 C4orf47A7E2U8 309 aa18.01■□□□□ 0.47
SEC13-218ENST00000490283 SMTNL1A8MU46 457 aa18.01■□□□□ 0.47
SEC13-218ENST00000490283 JAM2P57087 298 aa18.01■□□□□ 0.47
SEC13-218ENST00000490283 IRX4P78413 519 aa18.01■□□□□ 0.47
SEC13-218ENST00000490283 GFPT1Q06210 699 aaPredicted RBP18.01■□□□□ 0.47
SEC13-218ENST00000490283 SULT2A1Q06520 285 aa18.01■□□□□ 0.47
SEC13-218ENST00000490283 SFSWAPQ12872 951 aaKnown RBP18.01■□□□□ 0.47
SEC13-218ENST00000490283 SLC25A52Q3SY17 297 aa18.01■□□□□ 0.47
SEC13-218ENST00000490283 ANO6Q4KMQ2 910 aa18.01■□□□□ 0.47
SEC13-218ENST00000490283 FSCBQ5H9T9 825 aa18.01■□□□□ 0.47
SEC13-218ENST00000490283 ACBD5Q5T8D3 534 aaPredicted RBP18.01■□□□□ 0.47
SEC13-218ENST00000490283 PEAR1Q5VY43 1037 aaPredicted RBP18.01■□□□□ 0.47
SEC13-218ENST00000490283 ZNF776Q68DI1 518 aaPredicted RBP18.01■□□□□ 0.47
SEC13-218ENST00000490283 CAVIN1Q6NZI2 390 aaKnown RBP18.01■□□□□ 0.47
SEC13-218ENST00000490283 FBXL22Q6P050 247 aa18.01■□□□□ 0.47
SEC13-218ENST00000490283 SLC23A3Q6PIS1 610 aa18.01■□□□□ 0.47
SEC13-218ENST00000490283 CCAR2Q8N163 923 aaKnown RBP18.01■□□□□ 0.47
SEC13-218ENST00000490283 CADM4Q8NFZ8 388 aa18.01■□□□□ 0.47
SEC13-218ENST00000490283 ZNF419Q96HQ0 510 aaPredicted RBP18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms