RNA–Protein interactions for RNA: ENST00000490099.5

TMEM39A-210, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-210ENST00000490099 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.08□□□□□ -0.8
TMEM39A-210ENST00000490099 XPO7Q9UIA9 1087 aaKnown RBP10.08□□□□□ -0.8
TMEM39A-210ENST00000490099 DNAJC12Q9UKB3 198 aa10.08□□□□□ -0.8
TMEM39A-210ENST00000490099 MAP1BP46821 2468 aaKnown RBP10.08□□□□□ -0.8
TMEM39A-210ENST00000490099 NUMA1Q14980 2115 aa10.07□□□□□ -0.8
TMEM39A-210ENST00000490099 CABIN1Q9Y6J0 2220 aa10.07□□□□□ -0.8
TMEM39A-210ENST00000490099 CEP295Q9C0D2 2601 aa10.07□□□□□ -0.8
TMEM39A-210ENST00000490099 MUC22E2RYF6 1773 aaPredicted RBP10.07□□□□□ -0.8
TMEM39A-210ENST00000490099 ARHGAP33O14559 1287 aa10.07□□□□□ -0.8
TMEM39A-210ENST00000490099 GIPC1O14908 333 aa10.07□□□□□ -0.8
TMEM39A-210ENST00000490099 ASLP04424 464 aa10.07□□□□□ -0.8
TMEM39A-210ENST00000490099 EPHX1P07099 455 aa10.07□□□□□ -0.8
TMEM39A-210ENST00000490099 HLA-EP13747 358 aa10.07□□□□□ -0.8
TMEM39A-210ENST00000490099 CSKP41240 450 aa10.07□□□□□ -0.8
TMEM39A-210ENST00000490099 MTIF2P46199 727 aaKnown RBP10.07□□□□□ -0.8
TMEM39A-210ENST00000490099 RPS14P62263 151 aaKnown RBP10.07□□□□□ -0.8
TMEM39A-210ENST00000490099 PTK2Q05397 1052 aa10.07□□□□□ -0.8
TMEM39A-210ENST00000490099 GFPT1Q06210 699 aaPredicted RBP10.07□□□□□ -0.8
TMEM39A-210ENST00000490099 C5orf22Q49AR2 442 aa10.07□□□□□ -0.8
TMEM39A-210ENST00000490099 EFHC1Q5JVL4 640 aa10.07□□□□□ -0.8
TMEM39A-210ENST00000490099 SYCP2LQ5T4T6 812 aa10.07□□□□□ -0.8
TMEM39A-210ENST00000490099 ARTNQ5T4W7 220 aa10.07□□□□□ -0.8
TMEM39A-210ENST00000490099 KLHDC7AQ5VTJ3 777 aa10.07□□□□□ -0.8
TMEM39A-210ENST00000490099 OLFML1Q6UWY5 402 aa10.07□□□□□ -0.8
TMEM39A-210ENST00000490099 KIAA1324Q6UXG2 1013 aaKnown RBP10.07□□□□□ -0.8
TMEM39A-210ENST00000490099 SLC26A9Q7LBE3 791 aa10.07□□□□□ -0.8
TMEM39A-210ENST00000490099 SLC47A2Q86VL8 602 aa10.07□□□□□ -0.8
TMEM39A-210ENST00000490099 FAM114A1Q8IWE2 563 aa10.07□□□□□ -0.8
TMEM39A-210ENST00000490099 ADAM32Q8TC27 787 aa10.07□□□□□ -0.8
TMEM39A-210ENST00000490099 ENOX1Q8TC92 643 aaKnown RBP10.07□□□□□ -0.8
TMEM39A-210ENST00000490099 CNTNAP3BQ96NU0 1288 aa10.07□□□□□ -0.8
TMEM39A-210ENST00000490099 CNTNAP3Q9BZ76 1288 aa10.07□□□□□ -0.8
TMEM39A-210ENST00000490099 NUP62CLQ9H1M0 184 aa10.07□□□□□ -0.8
TMEM39A-210ENST00000490099 RSPH9Q9H1X1 276 aaPredicted RBP10.07□□□□□ -0.8
TMEM39A-210ENST00000490099 OSGEPQ9NPF4 335 aa10.07□□□□□ -0.8
TMEM39A-210ENST00000490099 SAMSN1Q9NSI8 373 aaKnown RBP10.07□□□□□ -0.8
TMEM39A-210ENST00000490099 SUN2Q9UH99 717 aa10.07□□□□□ -0.8
TMEM39A-210ENST00000490099 GOLGA6L22H0YM25 854 aa10.06□□□□□ -0.8
TMEM39A-210ENST00000490099 CAPN9O14815 690 aa10.06□□□□□ -0.8
TMEM39A-210ENST00000490099 HSF2BPO75031 334 aa10.06□□□□□ -0.8
TMEM39A-210ENST00000490099 NDUFS2O75306 463 aa10.06□□□□□ -0.8
TMEM39A-210ENST00000490099 LUC7L3O95232 432 aaKnown RBP10.06□□□□□ -0.8
TMEM39A-210ENST00000490099 ERBB2P04626 1255 aa10.06□□□□□ -0.8
TMEM39A-210ENST00000490099 SLC2A3P11169 496 aa10.06□□□□□ -0.8
TMEM39A-210ENST00000490099 CD59P13987 128 aa10.06□□□□□ -0.8
TMEM39A-210ENST00000490099 POLR2EP19388 210 aaKnown RBP10.06□□□□□ -0.8
TMEM39A-210ENST00000490099 TACR2P21452 398 aa10.06□□□□□ -0.8
TMEM39A-210ENST00000490099 EEF1GP26641 437 aaKnown RBP10.06□□□□□ -0.8
TMEM39A-210ENST00000490099 SCNN1AP37088 669 aa10.06□□□□□ -0.8
TMEM39A-210ENST00000490099 GABRB2P47870 512 aa10.06□□□□□ -0.8
TMEM39A-210ENST00000490099 BPIFB4P59827 614 aa10.06□□□□□ -0.8
TMEM39A-210ENST00000490099 CDK17Q00537 523 aa10.06□□□□□ -0.8
TMEM39A-210ENST00000490099 MTA1Q13330 715 aa10.06□□□□□ -0.8
TMEM39A-210ENST00000490099 SLC14A1Q13336 389 aa10.06□□□□□ -0.8
TMEM39A-210ENST00000490099 SLC12A1Q13621 1099 aa10.06□□□□□ -0.8
TMEM39A-210ENST00000490099 DRAP1Q14919 205 aaPredicted RBP10.06□□□□□ -0.8
TMEM39A-210ENST00000490099 HNRNPA1L2Q32P51 320 aaKnown RBP10.06□□□□□ -0.8
TMEM39A-210ENST00000490099 PTPN20Q4JDL3 420 aa10.06□□□□□ -0.8
TMEM39A-210ENST00000490099 TCP11X2Q5H9J9 407 aa10.06□□□□□ -0.8
TMEM39A-210ENST00000490099 WDR45BQ5MNZ6 344 aa10.06□□□□□ -0.8
TMEM39A-210ENST00000490099 C9orf64Q5T6V5 341 aa10.06□□□□□ -0.8
TMEM39A-210ENST00000490099 SH3PXD2AQ5TCZ1 1133 aa10.06□□□□□ -0.8
TMEM39A-210ENST00000490099 OTUD1Q5VV17 481 aaPredicted RBP10.06□□□□□ -0.8
TMEM39A-210ENST00000490099 CDKAL1Q5VV42 579 aa10.06□□□□□ -0.8
TMEM39A-210ENST00000490099 PSAPL1Q6NUJ1 521 aa10.06□□□□□ -0.8
TMEM39A-210ENST00000490099 DBX2Q6ZNG2 339 aa10.06□□□□□ -0.8
TMEM39A-210ENST00000490099 C11orf57Q6ZUT1 292 aaPredicted RBP10.06□□□□□ -0.8
TMEM39A-210ENST00000490099 ZDHHC17Q8IUH5 632 aa10.06□□□□□ -0.8
TMEM39A-210ENST00000490099 MFN1Q8IWA4 741 aa10.06□□□□□ -0.8
TMEM39A-210ENST00000490099 DEFB106AQ8N104 65 aa10.06□□□□□ -0.8
TMEM39A-210ENST00000490099 CFAP52Q8N1V2 620 aa10.06□□□□□ -0.8
TMEM39A-210ENST00000490099 C1orf131Q8NDD1 294 aaKnown RBP10.06□□□□□ -0.8
TMEM39A-210ENST00000490099 ERLEC1Q96DZ1 483 aa10.06□□□□□ -0.8
TMEM39A-210ENST00000490099 ALG14Q96F25 216 aa10.06□□□□□ -0.8
TMEM39A-210ENST00000490099 NPY6RQ99463 290 aa10.06□□□□□ -0.8
TMEM39A-210ENST00000490099 ORAI3Q9BRQ5 295 aa10.06□□□□□ -0.8
TMEM39A-210ENST00000490099 GPR174Q9BXC1 333 aa10.06□□□□□ -0.8
TMEM39A-210ENST00000490099 ADAM33Q9BZ11 813 aa10.06□□□□□ -0.8
TMEM39A-210ENST00000490099 ZDHHC5Q9C0B5 715 aa10.06□□□□□ -0.8
TMEM39A-210ENST00000490099 PLCB1Q9NQ66 1216 aa10.06□□□□□ -0.8
TMEM39A-210ENST00000490099 TMEM51Q9NW97 253 aa10.06□□□□□ -0.8
TMEM39A-210ENST00000490099 KIAA1522Q9P206 1035 aaPredicted RBP10.06□□□□□ -0.8
TMEM39A-210ENST00000490099 SUSD2Q9UGT4 822 aa10.06□□□□□ -0.8
TMEM39A-210ENST00000490099 DACH1Q9UI36 760 aa10.06□□□□□ -0.8
TMEM39A-210ENST00000490099 KMT2BQ9UMN6 2715 aaPredicted RBP10.06□□□□□ -0.8
TMEM39A-210ENST00000490099 ITIH6Q6UXX5 1313 aa10.06□□□□□ -0.8
TMEM39A-210ENST00000490099 ATXN2Q99700 1313 aaKnown RBP10.06□□□□□ -0.8
TMEM39A-210ENST00000490099 A0A1B0GTW7 788 aa10.05□□□□□ -0.8
TMEM39A-210ENST00000490099 TARSL2A2RTX5 802 aaKnown RBP10.05□□□□□ -0.8
TMEM39A-210ENST00000490099 LRRC10BA6NIK2 292 aa10.05□□□□□ -0.8
TMEM39A-210ENST00000490099 I6L893 689 aaPredicted RBP10.05□□□□□ -0.8
TMEM39A-210ENST00000490099 APOEP02649 317 aa10.05□□□□□ -0.8
TMEM39A-210ENST00000490099 CFIP05156 583 aa10.05□□□□□ -0.8
TMEM39A-210ENST00000490099 SRPRAP08240 638 aaKnown RBP10.05□□□□□ -0.8
TMEM39A-210ENST00000490099 SYPP08247 313 aa10.05□□□□□ -0.8
TMEM39A-210ENST00000490099 NUDT7P0C024 238 aa10.05□□□□□ -0.8
TMEM39A-210ENST00000490099 PNMA6AP0CW24 399 aaPredicted RBP10.05□□□□□ -0.8
TMEM39A-210ENST00000490099 UCHL3P15374 230 aa10.05□□□□□ -0.8
TMEM39A-210ENST00000490099 CYP11B1P15538 503 aa10.05□□□□□ -0.8
TMEM39A-210ENST00000490099 PTMSP20962 102 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms