RNA–Protein interactions for RNA: ENST00000489402.1

SNX17-207, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 743 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-207ENST00000489402 PKDCCQ504Y2 493 aa9.72□□□□□ -0.85
SNX17-207ENST00000489402 COBLL1Q53SF7 1204 aa9.72□□□□□ -0.85
SNX17-207ENST00000489402 CCDC157Q569K6 752 aa9.72□□□□□ -0.85
SNX17-207ENST00000489402 FAM133BQ5BKY9 247 aaKnown RBP9.72□□□□□ -0.85
SNX17-207ENST00000489402 KIAA0895LQ68EN5 471 aa9.72□□□□□ -0.85
SNX17-207ENST00000489402 PMF1Q6P1K2 205 aa9.72□□□□□ -0.85
SNX17-207ENST00000489402 LAYNQ6UX15 382 aa9.72□□□□□ -0.85
SNX17-207ENST00000489402 PDZD3Q86UT5 571 aa9.72□□□□□ -0.85
SNX17-207ENST00000489402 PPM1KQ8N3J5 372 aa9.72□□□□□ -0.85
SNX17-207ENST00000489402 UBR7Q8N806 425 aa9.72□□□□□ -0.85
SNX17-207ENST00000489402 FIBINQ8TAL6 211 aa9.72□□□□□ -0.85
SNX17-207ENST00000489402 SLC35F5Q8WV83 523 aa9.72□□□□□ -0.85
SNX17-207ENST00000489402 SLC35C1Q96A29 364 aa9.72□□□□□ -0.85
SNX17-207ENST00000489402 AZIN2Q96A70 460 aa9.72□□□□□ -0.85
SNX17-207ENST00000489402 SERPINB11Q96P15 392 aa9.72□□□□□ -0.85
SNX17-207ENST00000489402 NT5C1BQ96P26 610 aa9.72□□□□□ -0.85
SNX17-207ENST00000489402 GSDMAQ96QA5 445 aa9.72□□□□□ -0.85
SNX17-207ENST00000489402 RSPH9Q9H1X1 276 aaPredicted RBP9.72□□□□□ -0.85
SNX17-207ENST00000489402 PABPC3Q9H361 631 aaKnown RBP9.72□□□□□ -0.85
SNX17-207ENST00000489402 METTL14Q9HCE5 456 aaKnown RBP9.72□□□□□ -0.85
SNX17-207ENST00000489402 TOR4AQ9NXH8 423 aa9.72□□□□□ -0.85
SNX17-207ENST00000489402 FBXL12Q9NXK8 326 aa9.72□□□□□ -0.85
SNX17-207ENST00000489402 DKK4Q9UBT3 224 aa9.72□□□□□ -0.85
SNX17-207ENST00000489402 FTSJ1Q9UET6 329 aa9.72□□□□□ -0.85
SNX17-207ENST00000489402 BTBD3Q9Y2F9 522 aa9.72□□□□□ -0.85
SNX17-207ENST00000489402 CEP83Q9Y592 693 aa9.72□□□□□ -0.85
SNX17-207ENST00000489402 PLXNA2O75051 1894 aa9.71□□□□□ -0.85
SNX17-207ENST00000489402 NYNRINQ9P2P1 1898 aaKnown RBP9.71□□□□□ -0.85
SNX17-207ENST00000489402 GOLGA6L7A0A1B0GV03 622 aa9.71□□□□□ -0.86
SNX17-207ENST00000489402 TRIM49BA6NDI0 452 aa9.71□□□□□ -0.86
SNX17-207ENST00000489402 GOLGA6L4A6NEF3 574 aa9.71□□□□□ -0.86
SNX17-207ENST00000489402 LRRC72A6NJI9 287 aa9.71□□□□□ -0.86
SNX17-207ENST00000489402 H0Y8X5 98 aa9.71□□□□□ -0.86
SNX17-207ENST00000489402 RNF225M0QZC1 329 aaPredicted RBP9.71□□□□□ -0.86
SNX17-207ENST00000489402 KCNK3O14649 394 aa9.71□□□□□ -0.86
SNX17-207ENST00000489402 SART1O43290 800 aaKnown RBP9.71□□□□□ -0.86
SNX17-207ENST00000489402 SIN3BO75182 1162 aa9.71□□□□□ -0.86
SNX17-207ENST00000489402 DKK1O94907 266 aa9.71□□□□□ -0.86
SNX17-207ENST00000489402 BRD2P25440 801 aaKnown RBP9.71□□□□□ -0.86
SNX17-207ENST00000489402 CTSKP43235 329 aa9.71□□□□□ -0.86
SNX17-207ENST00000489402 NUMBP49757 651 aa9.71□□□□□ -0.86
SNX17-207ENST00000489402 IL9RQ01113 521 aa9.71□□□□□ -0.86
SNX17-207ENST00000489402 NNTQ13423 1086 aa9.71□□□□□ -0.86
SNX17-207ENST00000489402 STIM1Q13586 685 aa9.71□□□□□ -0.86
SNX17-207ENST00000489402 CST6Q15828 149 aa9.71□□□□□ -0.86
SNX17-207ENST00000489402 HNRNPA1L2Q32P51 320 aaKnown RBP9.71□□□□□ -0.86
SNX17-207ENST00000489402 CCDC40Q4G0X9 1142 aa9.71□□□□□ -0.86
SNX17-207ENST00000489402 KCNT1Q5JUK3 1230 aa9.71□□□□□ -0.86
SNX17-207ENST00000489402 RNF219Q5W0B1 726 aaPredicted RBP9.71□□□□□ -0.86
SNX17-207ENST00000489402 ANKRD40Q6AI12 368 aa9.71□□□□□ -0.86
SNX17-207ENST00000489402 DHX40Q8IX18 779 aaKnown RBP9.71□□□□□ -0.86
SNX17-207ENST00000489402 CARNMT1Q8N4J0 409 aa9.71□□□□□ -0.86
SNX17-207ENST00000489402 KDM1BQ8NB78 822 aa9.71□□□□□ -0.86
SNX17-207ENST00000489402 CLEC4CQ8WTT0 213 aa9.71□□□□□ -0.86
SNX17-207ENST00000489402 TFAP2BQ92481 460 aa9.71□□□□□ -0.86
SNX17-207ENST00000489402 KAT5Q92993 513 aa9.71□□□□□ -0.86
SNX17-207ENST00000489402 SMARCE1Q969G3 411 aa9.71□□□□□ -0.86
SNX17-207ENST00000489402 FAM149B1Q96BN6 582 aa9.71□□□□□ -0.86
SNX17-207ENST00000489402 HSFY1Q96LI6 401 aa9.71□□□□□ -0.86
SNX17-207ENST00000489402 OMDQ99983 421 aa9.71□□□□□ -0.86
SNX17-207ENST00000489402 TRIM62Q9BVG3 475 aa9.71□□□□□ -0.86
SNX17-207ENST00000489402 MIS12Q9H081 205 aa9.71□□□□□ -0.86
SNX17-207ENST00000489402 HOOK1Q9UJC3 728 aaKnown RBP9.71□□□□□ -0.86
SNX17-207ENST00000489402 TPX2Q9ULW0 747 aaKnown RBP9.71□□□□□ -0.86
SNX17-207ENST00000489402 TLR6Q9Y2C9 796 aa9.71□□□□□ -0.86
SNX17-207ENST00000489402 RAXQ9Y2V3 346 aa9.71□□□□□ -0.86
SNX17-207ENST00000489402 A0A1B0GTQ1 180 aa9.7□□□□□ -0.86
SNX17-207ENST00000489402 EDDM13A0A1B0GTR0 161 aa9.7□□□□□ -0.86
SNX17-207ENST00000489402 A0A1W2PP55 124 aa9.7□□□□□ -0.86
SNX17-207ENST00000489402 A0A1W2PPC4 97 aa9.7□□□□□ -0.86
SNX17-207ENST00000489402 TARSL2A2RTX5 802 aaKnown RBP9.7□□□□□ -0.86
SNX17-207ENST00000489402 PSMA7O14818 248 aa9.7□□□□□ -0.86
SNX17-207ENST00000489402 VILLO15195 856 aa9.7□□□□□ -0.86
SNX17-207ENST00000489402 MID1O15344 667 aa9.7□□□□□ -0.86
SNX17-207ENST00000489402 YKT6O15498 198 aa9.7□□□□□ -0.86
SNX17-207ENST00000489402 PAPSS1O43252 624 aaPredicted RBP9.7□□□□□ -0.86
SNX17-207ENST00000489402 RNASEH2AO75792 299 aaKnown RBP9.7□□□□□ -0.86
SNX17-207ENST00000489402 APOEP02649 317 aa9.7□□□□□ -0.86
SNX17-207ENST00000489402 IGHV4-34P06331 123 aa9.7□□□□□ -0.86
SNX17-207ENST00000489402 SRPRAP08240 638 aaKnown RBP9.7□□□□□ -0.86
SNX17-207ENST00000489402 ABCB4P21439 1286 aa9.7□□□□□ -0.86
SNX17-207ENST00000489402 HNF1BP35680 557 aa9.7□□□□□ -0.86
SNX17-207ENST00000489402 NNMTP40261 264 aa9.7□□□□□ -0.86
SNX17-207ENST00000489402 PPP1R2P41236 205 aa9.7□□□□□ -0.86
SNX17-207ENST00000489402 CSKP41240 450 aa9.7□□□□□ -0.86
SNX17-207ENST00000489402 GALCP54803 685 aa9.7□□□□□ -0.86
SNX17-207ENST00000489402 RPS24P62847 133 aaKnown RBP9.7□□□□□ -0.86
SNX17-207ENST00000489402 NUCB2P80303 420 aa9.7□□□□□ -0.86
SNX17-207ENST00000489402 ARID5BQ14865 1188 aa9.7□□□□□ -0.86
SNX17-207ENST00000489402 MS4A13Q5J8X5 152 aa9.7□□□□□ -0.86
SNX17-207ENST00000489402 NADSYN1Q6IA69 706 aa9.7□□□□□ -0.86
SNX17-207ENST00000489402 NCEH1Q6PIU2 408 aa9.7□□□□□ -0.86
SNX17-207ENST00000489402 MMAAQ8IVH4 418 aaKnown RBP9.7□□□□□ -0.86
SNX17-207ENST00000489402 PDCD7Q8N8D1 485 aaKnown RBP9.7□□□□□ -0.86
SNX17-207ENST00000489402 OR2T34Q8NGX1 318 aa9.7□□□□□ -0.86
SNX17-207ENST00000489402 HNRNPLLQ8WVV9 542 aaKnown RBP9.7□□□□□ -0.86
SNX17-207ENST00000489402 TTC17Q96AE7 1141 aa9.7□□□□□ -0.86
SNX17-207ENST00000489402 MYO19Q96H55 970 aa9.7□□□□□ -0.86
SNX17-207ENST00000489402 PRICKLE1Q96MT3 831 aaPredicted RBP9.7□□□□□ -0.86
SNX17-207ENST00000489402 CEP63Q96MT8 703 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms