RNA–Protein interactions for RNA: ENST00000489378.5

SSBP1-212, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 1,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-212ENST00000489378 CORO1AP31146 461 aaKnown RBP9.6□□□□□ -0.87
SSBP1-212ENST00000489378 CHKAP35790 457 aa9.6□□□□□ -0.87
SSBP1-212ENST00000489378 GMPRP36959 345 aa9.6□□□□□ -0.87
SSBP1-212ENST00000489378 CCR10P46092 362 aa9.6□□□□□ -0.87
SSBP1-212ENST00000489378 DUOXA2Q1HG44 320 aa9.6□□□□□ -0.87
SSBP1-212ENST00000489378 ISXQ2M1V0 245 aa9.6□□□□□ -0.87
SSBP1-212ENST00000489378 WDR72Q3MJ13 1102 aa9.6□□□□□ -0.87
SSBP1-212ENST00000489378 SGO2Q562F6 1265 aa9.6□□□□□ -0.87
SSBP1-212ENST00000489378 C10orf120Q5SQS8 335 aa9.6□□□□□ -0.87
SSBP1-212ENST00000489378 L1TD1Q5T7N2 865 aaKnown RBP9.6□□□□□ -0.87
SSBP1-212ENST00000489378 KLHDC10Q6PID8 442 aa9.6□□□□□ -0.87
SSBP1-212ENST00000489378 USP30Q70CQ3 517 aa9.6□□□□□ -0.87
SSBP1-212ENST00000489378 TMC6Q7Z403 805 aa9.6□□□□□ -0.87
SSBP1-212ENST00000489378 ZC3H3Q8IXZ2 948 aaKnown RBP9.6□□□□□ -0.87
SSBP1-212ENST00000489378 FUKQ8N0W3 1084 aa9.6□□□□□ -0.87
SSBP1-212ENST00000489378 OXR1Q8N573 874 aa9.6□□□□□ -0.87
SSBP1-212ENST00000489378 RAD54LQ92698 747 aa9.6□□□□□ -0.87
SSBP1-212ENST00000489378 SMARCD1Q96GM5 515 aa9.6□□□□□ -0.87
SSBP1-212ENST00000489378 CDK15Q96Q40 435 aa9.6□□□□□ -0.87
SSBP1-212ENST00000489378 ACCSQ96QU6 501 aa9.6□□□□□ -0.87
SSBP1-212ENST00000489378 CCNL2Q96S94 520 aaPredicted RBP9.6□□□□□ -0.87
SSBP1-212ENST00000489378 ARHGAP9Q9BRR9 750 aa9.6□□□□□ -0.87
SSBP1-212ENST00000489378 RSPH9Q9H1X1 276 aaPredicted RBP9.6□□□□□ -0.87
SSBP1-212ENST00000489378 NEUROG2Q9H2A3 272 aa9.6□□□□□ -0.87
SSBP1-212ENST00000489378 FBXO44Q9H4M3 255 aa9.6□□□□□ -0.87
SSBP1-212ENST00000489378 FBRSQ9HAH7 460 aa9.6□□□□□ -0.87
SSBP1-212ENST00000489378 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.6□□□□□ -0.87
SSBP1-212ENST00000489378 TBC1D7Q9P0N9 293 aa9.6□□□□□ -0.87
SSBP1-212ENST00000489378 AGO1Q9UL18 857 aaKnown RBP9.6□□□□□ -0.87
SSBP1-212ENST00000489378 PLA2G4CQ9UP65 541 aa9.6□□□□□ -0.87
SSBP1-212ENST00000489378 SRPK3Q9UPE1 567 aa9.6□□□□□ -0.87
SSBP1-212ENST00000489378 EXOC7Q9UPT5 735 aa9.6□□□□□ -0.87
SSBP1-212ENST00000489378 NCKAP1Q9Y2A7 1128 aa9.6□□□□□ -0.87
SSBP1-212ENST00000489378 CENPEQ02224 2701 aa9.6□□□□□ -0.87
SSBP1-212ENST00000489378 A0A1W2PP55 124 aa9.59□□□□□ -0.87
SSBP1-212ENST00000489378 BLACEA4D250 179 aa9.59□□□□□ -0.87
SSBP1-212ENST00000489378 CDRT15L2A8MXV6 281 aa9.59□□□□□ -0.87
SSBP1-212ENST00000489378 H3BM21 787 aa9.59□□□□□ -0.87
SSBP1-212ENST00000489378 FFAR2O15552 330 aa9.59□□□□□ -0.87
SSBP1-212ENST00000489378 PRPF6O94906 941 aaKnown RBP9.59□□□□□ -0.87
SSBP1-212ENST00000489378 FAM163BP0C2L3 166 aa9.59□□□□□ -0.87
SSBP1-212ENST00000489378 CCDC130P13994 396 aa9.59□□□□□ -0.87
SSBP1-212ENST00000489378 HLA-FP30511 346 aa9.59□□□□□ -0.87
SSBP1-212ENST00000489378 CCR5P51681 352 aa9.59□□□□□ -0.87
SSBP1-212ENST00000489378 CASP5P51878 434 aa9.59□□□□□ -0.87
SSBP1-212ENST00000489378 MAP3K7CLP57077 242 aa9.59□□□□□ -0.87
SSBP1-212ENST00000489378 TNNC1P63316 161 aa9.59□□□□□ -0.87
SSBP1-212ENST00000489378 ASIC1P78348 528 aa9.59□□□□□ -0.87
SSBP1-212ENST00000489378 EHHADHQ08426 723 aa9.59□□□□□ -0.87
SSBP1-212ENST00000489378 SRSF6Q13247 344 aaKnown RBP9.59□□□□□ -0.87
SSBP1-212ENST00000489378 IGFBP7Q16270 282 aa9.59□□□□□ -0.87
SSBP1-212ENST00000489378 C4orf48Q5BLP8 95 aa9.59□□□□□ -0.87
SSBP1-212ENST00000489378 XKR5Q6UX68 686 aa9.59□□□□□ -0.87
SSBP1-212ENST00000489378 TRAPPC11Q7Z392 1133 aa9.59□□□□□ -0.87
SSBP1-212ENST00000489378 ADIPOR2Q86V24 386 aa9.59□□□□□ -0.87
SSBP1-212ENST00000489378 CBWD2Q8IUF1 395 aa9.59□□□□□ -0.87
SSBP1-212ENST00000489378 DENND1CQ8IV53 801 aa9.59□□□□□ -0.87
SSBP1-212ENST00000489378 OR2T34Q8NGX1 318 aa9.59□□□□□ -0.87
SSBP1-212ENST00000489378 DDI1Q8WTU0 396 aa9.59□□□□□ -0.87
SSBP1-212ENST00000489378 GOLGA1Q92805 767 aa9.59□□□□□ -0.87
SSBP1-212ENST00000489378 CCDC97Q96F63 343 aaPredicted RBP9.59□□□□□ -0.87
SSBP1-212ENST00000489378 ATXN7L3BQ96GX2 97 aa9.59□□□□□ -0.87
SSBP1-212ENST00000489378 SLC2A11Q9BYW1 496 aa9.59□□□□□ -0.87
SSBP1-212ENST00000489378 SMYD3Q9H7B4 428 aa9.59□□□□□ -0.87
SSBP1-212ENST00000489378 MRPL44Q9H9J2 332 aaKnown RBP9.59□□□□□ -0.87
SSBP1-212ENST00000489378 UCKL1Q9NWZ5 548 aa9.59□□□□□ -0.87
SSBP1-212ENST00000489378 SCML2Q9UQR0 700 aa9.59□□□□□ -0.87
SSBP1-212ENST00000489378 ZNF510Q9Y2H8 683 aa9.59□□□□□ -0.87
SSBP1-212ENST00000489378 LY6G6EA0A0G2JKS1 128 aa9.58□□□□□ -0.88
SSBP1-212ENST00000489378 LRRC72A6NJI9 287 aa9.58□□□□□ -0.88
SSBP1-212ENST00000489378 MID1O15344 667 aa9.58□□□□□ -0.88
SSBP1-212ENST00000489378 RNASEH2AO75792 299 aaKnown RBP9.58□□□□□ -0.88
SSBP1-212ENST00000489378 CYBBP04839 570 aa9.58□□□□□ -0.88
SSBP1-212ENST00000489378 CENPBP07199 599 aaPredicted RBP9.58□□□□□ -0.88
SSBP1-212ENST00000489378 GIMD1P0DJR0 217 aa9.58□□□□□ -0.88
SSBP1-212ENST00000489378 CKMT1AP12532 417 aa9.58□□□□□ -0.88
SSBP1-212ENST00000489378 HOXD9P28356 352 aaPredicted RBP9.58□□□□□ -0.88
SSBP1-212ENST00000489378 PPP2CBP62714 309 aa9.58□□□□□ -0.88
SSBP1-212ENST00000489378 PPP2CAP67775 309 aa9.58□□□□□ -0.88
SSBP1-212ENST00000489378 SLC45A4Q5BKX6 768 aa9.58□□□□□ -0.88
SSBP1-212ENST00000489378 MRPL14Q6P1L8 145 aaKnown RBP9.58□□□□□ -0.88
SSBP1-212ENST00000489378 USP53Q70EK8 1073 aa9.58□□□□□ -0.88
SSBP1-212ENST00000489378 CHST9Q7L1S5 443 aa9.58□□□□□ -0.88
SSBP1-212ENST00000489378 SCD5Q86SK9 330 aa9.58□□□□□ -0.88
SSBP1-212ENST00000489378 GPD1LQ8N335 351 aa9.58□□□□□ -0.88
SSBP1-212ENST00000489378 MFSD2AQ8NA29 543 aa9.58□□□□□ -0.88
SSBP1-212ENST00000489378 OR4C6Q8NH72 309 aa9.58□□□□□ -0.88
SSBP1-212ENST00000489378 JAKMIP2Q96AA8 810 aa9.58□□□□□ -0.88
SSBP1-212ENST00000489378 SGF29Q96ES7 293 aa9.58□□□□□ -0.88
SSBP1-212ENST00000489378 CALML4Q96GE6 196 aa9.58□□□□□ -0.88
SSBP1-212ENST00000489378 SEMA3CQ99985 751 aa9.58□□□□□ -0.88
SSBP1-212ENST00000489378 FGFBP2Q9BYJ0 223 aa9.58□□□□□ -0.88
SSBP1-212ENST00000489378 CSNK1G1Q9HCP0 422 aa9.58□□□□□ -0.88
SSBP1-212ENST00000489378 TJP2Q9UDY2 1190 aa9.58□□□□□ -0.88
SSBP1-212ENST00000489378 ATXN7L1Q9ULK2 861 aaPredicted RBP9.58□□□□□ -0.88
SSBP1-212ENST00000489378 U3KQA8 63 aa9.58□□□□□ -0.88
SSBP1-212ENST00000489378 RP1P56715 2156 aa9.58□□□□□ -0.88
SSBP1-212ENST00000489378 HHLA1C9JL84 531 aa9.57□□□□□ -0.88
SSBP1-212ENST00000489378 LZTS3O60299 673 aaPredicted RBP9.57□□□□□ -0.88
SSBP1-212ENST00000489378 ITGB2P05107 769 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms