RNA–Protein interactions for RNA: ENST00000489337.5

SMTN-218, Transcript of smoothelin, humanhuman

TSL 2

Gene SMTN, Length 3,560 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMTN-218ENST00000489337 PBX3P40426 434 aa12.07□□□□□ -0.48
SMTN-218ENST00000489337 GDF10P55107 478 aa12.07□□□□□ -0.48
SMTN-218ENST00000489337 HDAC4P56524 1084 aa12.07□□□□□ -0.48
SMTN-218ENST00000489337 RPL26P61254 145 aaKnown RBP12.07□□□□□ -0.48
SMTN-218ENST00000489337 STX3Q13277 289 aa12.07□□□□□ -0.48
SMTN-218ENST00000489337 MON1BQ7L1V2 547 aa12.07□□□□□ -0.48
SMTN-218ENST00000489337 ACOT1Q86TX2 421 aa12.07□□□□□ -0.48
SMTN-218ENST00000489337 FEZF2Q8TBJ5 459 aa12.07□□□□□ -0.48
SMTN-218ENST00000489337 NDRG1Q92597 394 aaKnown RBP12.07□□□□□ -0.48
SMTN-218ENST00000489337 WDR37Q9Y2I8 494 aa12.07□□□□□ -0.48
SMTN-218ENST00000489337 KBTBD13C9JR72 458 aa12.07□□□□□ -0.48
SMTN-218ENST00000489337 KRT37O76014 449 aa12.07□□□□□ -0.48
SMTN-218ENST00000489337 TMEM63AO94886 807 aa12.07□□□□□ -0.48
SMTN-218ENST00000489337 ASGR1P07306 291 aa12.07□□□□□ -0.48
SMTN-218ENST00000489337 TBXAS1P24557 533 aaPredicted RBP12.07□□□□□ -0.48
SMTN-218ENST00000489337 VARSP26640 1264 aaKnown RBP12.07□□□□□ -0.48
SMTN-218ENST00000489337 PEX6Q13608 980 aa12.07□□□□□ -0.48
SMTN-218ENST00000489337 GK3PQ14409 553 aa12.07□□□□□ -0.48
SMTN-218ENST00000489337 TFDP3Q5H9I0 405 aa12.07□□□□□ -0.48
SMTN-218ENST00000489337 ZNF667Q5HYK9 610 aa12.07□□□□□ -0.48
SMTN-218ENST00000489337 MPZL3Q6UWV2 235 aa12.07□□□□□ -0.48
SMTN-218ENST00000489337 NCCRP1Q6ZVX7 275 aaPredicted RBP12.07□□□□□ -0.48
SMTN-218ENST00000489337 ACTL9Q8TC94 416 aa12.07□□□□□ -0.48
SMTN-218ENST00000489337 NKD2Q969F2 451 aaPredicted RBP12.07□□□□□ -0.48
SMTN-218ENST00000489337 LRGUKQ96M69 825 aa12.07□□□□□ -0.48
SMTN-218ENST00000489337 C17orf75Q9HAS0 396 aa12.07□□□□□ -0.48
SMTN-218ENST00000489337 PACSIN3Q9UKS6 424 aa12.07□□□□□ -0.48
SMTN-218ENST00000489337 SSX2IPQ9Y2D8 614 aa12.07□□□□□ -0.48
SMTN-218ENST00000489337 PLLPQ9Y342 182 aa12.07□□□□□ -0.48
SMTN-218ENST00000489337 WDR87Q6ZQQ6 2873 aa12.06□□□□□ -0.48
SMTN-218ENST00000489337 GOLGA4Q13439 2230 aaKnown RBP12.06□□□□□ -0.48
SMTN-218ENST00000489337 CRTAMO95727 393 aa12.06□□□□□ -0.48
SMTN-218ENST00000489337 CALB1P05937 261 aa12.06□□□□□ -0.48
SMTN-218ENST00000489337 MLH1P40692 756 aa12.06□□□□□ -0.48
SMTN-218ENST00000489337 PSEN2P49810 448 aa12.06□□□□□ -0.48
SMTN-218ENST00000489337 NR1H2P55055 460 aa12.06□□□□□ -0.48
SMTN-218ENST00000489337 SP3Q02447 781 aa12.06□□□□□ -0.48
SMTN-218ENST00000489337 CYTH1Q15438 398 aa12.06□□□□□ -0.48
SMTN-218ENST00000489337 TARBP2Q15633 366 aaKnown RBP12.06□□□□□ -0.48
SMTN-218ENST00000489337 SLFN12LQ6IEE8 588 aa12.06□□□□□ -0.48
SMTN-218ENST00000489337 NAT8LQ8N9F0 302 aa12.06□□□□□ -0.48
SMTN-218ENST00000489337 TMEM35BQ8NCS4 154 aa12.06□□□□□ -0.48
SMTN-218ENST00000489337 TRPV1Q8NER1 839 aa12.06□□□□□ -0.48
SMTN-218ENST00000489337 PPTC7Q8NI37 304 aa12.06□□□□□ -0.48
SMTN-218ENST00000489337 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.06□□□□□ -0.48
SMTN-218ENST00000489337 DDI1Q8WTU0 396 aa12.06□□□□□ -0.48
SMTN-218ENST00000489337 WNT8BQ93098 351 aa12.06□□□□□ -0.48
SMTN-218ENST00000489337 CFAP36Q96G28 342 aa12.06□□□□□ -0.48
SMTN-218ENST00000489337 C20orf27Q9GZN8 174 aa12.06□□□□□ -0.48
SMTN-218ENST00000489337 LIN28AQ9H9Z2 209 aaKnown RBP12.06□□□□□ -0.48
SMTN-218ENST00000489337 HEMK1Q9Y5R4 338 aaPredicted RBP12.06□□□□□ -0.48
SMTN-218ENST00000489337 SDR42E2A6NKP2 422 aa12.06□□□□□ -0.48
SMTN-218ENST00000489337 DENRO43583 198 aaKnown RBP12.06□□□□□ -0.48
SMTN-218ENST00000489337 PEX1O43933 1283 aa12.06□□□□□ -0.48
SMTN-218ENST00000489337 KLHL2O95198 593 aa12.06□□□□□ -0.48
SMTN-218ENST00000489337 ATG7O95352 703 aa12.06□□□□□ -0.48
SMTN-218ENST00000489337 SNRPAP09012 282 aaKnown RBP12.06□□□□□ -0.48
SMTN-218ENST00000489337 ZFXP17010 805 aaPredicted RBP12.06□□□□□ -0.48
SMTN-218ENST00000489337 NCF2P19878 526 aaPredicted RBP12.06□□□□□ -0.48
SMTN-218ENST00000489337 RPL22P35268 128 aaKnown RBP12.06□□□□□ -0.48
SMTN-218ENST00000489337 CD97P48960 835 aa12.06□□□□□ -0.48
SMTN-218ENST00000489337 RARS2Q5T160 578 aaKnown RBP12.06□□□□□ -0.48
SMTN-218ENST00000489337 ZNF618Q5T7W0 954 aa12.06□□□□□ -0.48
SMTN-218ENST00000489337 CES4AQ5XG92 561 aa12.06□□□□□ -0.48
SMTN-218ENST00000489337 PATL1Q86TB9 770 aaKnown RBP12.06□□□□□ -0.48
SMTN-218ENST00000489337 RSPH3Q86UC2 560 aa12.06□□□□□ -0.48
SMTN-218ENST00000489337 ZNF410Q86VK4 478 aa12.06□□□□□ -0.48
SMTN-218ENST00000489337 IGDCC3Q8IVU1 814 aa12.06□□□□□ -0.48
SMTN-218ENST00000489337 PQLC1Q8N2U9 271 aa12.06□□□□□ -0.48
SMTN-218ENST00000489337 GALNT4Q8N4A0 578 aa12.06□□□□□ -0.48
SMTN-218ENST00000489337 TRIML2Q8N7C3 387 aa12.06□□□□□ -0.48
SMTN-218ENST00000489337 SMYD1Q8NB12 490 aa12.06□□□□□ -0.48
SMTN-218ENST00000489337 CISHQ9NSE2 258 aa12.06□□□□□ -0.48
SMTN-218ENST00000489337 F8VP50 259 aa12.05□□□□□ -0.48
SMTN-218ENST00000489337 ACKR2O00590 384 aa12.05□□□□□ -0.48
SMTN-218ENST00000489337 RECQL4O94761 1208 aa12.05□□□□□ -0.48
SMTN-218ENST00000489337 FAM58BPP0C7Q3 252 aa12.05□□□□□ -0.48
SMTN-218ENST00000489337 GARTP22102 1010 aa12.05□□□□□ -0.48
SMTN-218ENST00000489337 FCGRTP55899 365 aa12.05□□□□□ -0.48
SMTN-218ENST00000489337 OTUD4Q01804 1114 aaKnown RBP12.05□□□□□ -0.48
SMTN-218ENST00000489337 MBTD1Q05BQ5 628 aa12.05□□□□□ -0.48
SMTN-218ENST00000489337 CACNB2Q08289 660 aaPredicted RBP12.05□□□□□ -0.48
SMTN-218ENST00000489337 BMPR2Q13873 1038 aa12.05□□□□□ -0.48
SMTN-218ENST00000489337 C16orf72Q14CZ0 275 aa12.05□□□□□ -0.48
SMTN-218ENST00000489337 TTC39BQ5VTQ0 682 aaPredicted RBP12.05□□□□□ -0.48
SMTN-218ENST00000489337 MFSD14CQ5VZR4 134 aa12.05□□□□□ -0.48
SMTN-218ENST00000489337 TXNRD3NBQ6F5E7 133 aa12.05□□□□□ -0.48
SMTN-218ENST00000489337 MAMDC4Q6UXC1 1216 aa12.05□□□□□ -0.48
SMTN-218ENST00000489337 NIFKQ9BYG3 293 aaKnown RBP12.05□□□□□ -0.48
SMTN-218ENST00000489337 ST6GALNAC4Q9H4F1 302 aa12.05□□□□□ -0.48
SMTN-218ENST00000489337 XAB2Q9HCS7 855 aaKnown RBP12.05□□□□□ -0.48
SMTN-218ENST00000489337 PDLIM7Q9NR12 457 aa12.05□□□□□ -0.48
SMTN-218ENST00000489337 SORCS3Q9UPU3 1222 aa12.05□□□□□ -0.48
SMTN-218ENST00000489337 PPME1Q9Y570 386 aa12.05□□□□□ -0.48
SMTN-218ENST00000489337 hCG_1818297A0A087WSY0 165 aa12.05□□□□□ -0.48
SMTN-218ENST00000489337 CASQ2O14958 399 aaPredicted RBP12.05□□□□□ -0.48
SMTN-218ENST00000489337 PMM2O15305 246 aa12.05□□□□□ -0.48
SMTN-218ENST00000489337 ZMPSTE24O75844 475 aa12.05□□□□□ -0.48
SMTN-218ENST00000489337 LDHAP00338 332 aaKnown RBP12.05□□□□□ -0.48
SMTN-218ENST00000489337 CDH2P19022 906 aaPredicted RBP12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms