RNA–Protein interactions for RNA: ENST00000489111.1

USP11-211, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 516 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-211ENST00000489111 TACR2P21452 398 aa10.31□□□□□ -0.76
USP11-211ENST00000489111 EPHA5P54756 1037 aa10.31□□□□□ -0.76
USP11-211ENST00000489111 CAV1Q03135 178 aa10.31□□□□□ -0.76
USP11-211ENST00000489111 AP1B1Q10567 949 aa10.31□□□□□ -0.76
USP11-211ENST00000489111 GPS1Q13098 491 aa10.31□□□□□ -0.76
USP11-211ENST00000489111 DUSP6Q16828 381 aa10.31□□□□□ -0.76
USP11-211ENST00000489111 KCTD19Q17RG1 926 aaPredicted RBP10.31□□□□□ -0.76
USP11-211ENST00000489111 P3H1Q32P28 736 aa10.31□□□□□ -0.76
USP11-211ENST00000489111 GPR158Q5T848 1215 aa10.31□□□□□ -0.76
USP11-211ENST00000489111 ZNF697Q5TEC3 545 aa10.31□□□□□ -0.76
USP11-211ENST00000489111 IZUMO3Q5VZ72 239 aa10.31□□□□□ -0.76
USP11-211ENST00000489111 HEATR6Q6AI08 1181 aaKnown RBP10.31□□□□□ -0.76
USP11-211ENST00000489111 TFAP2DQ7Z6R9 452 aa10.31□□□□□ -0.76
USP11-211ENST00000489111 C14orf80Q86SX3 495 aa10.31□□□□□ -0.76
USP11-211ENST00000489111 DENND1CQ8IV53 801 aa10.31□□□□□ -0.76
USP11-211ENST00000489111 LGI2Q8N0V4 545 aa10.31□□□□□ -0.76
USP11-211ENST00000489111 ATPAF2Q8N5M1 289 aa10.31□□□□□ -0.76
USP11-211ENST00000489111 CCDC33Q8N5R6 958 aa10.31□□□□□ -0.76
USP11-211ENST00000489111 NPWQ8N729 165 aa10.31□□□□□ -0.76
USP11-211ENST00000489111 ARL14EPQ8N8R7 260 aaPredicted RBP10.31□□□□□ -0.76
USP11-211ENST00000489111 RTL3Q8N8U3 475 aaKnown RBP10.31□□□□□ -0.76
USP11-211ENST00000489111 MAB21L3Q8N8X9 362 aa10.31□□□□□ -0.76
USP11-211ENST00000489111 TTC16Q8NEE8 873 aa10.31□□□□□ -0.76
USP11-211ENST00000489111 MRPL38Q96DV4 380 aaKnown RBP10.31□□□□□ -0.76
USP11-211ENST00000489111 FMO2Q99518 471 aa10.31□□□□□ -0.76
USP11-211ENST00000489111 LRRC3Q9BY71 257 aa10.31□□□□□ -0.76
USP11-211ENST00000489111 RNF38Q9H0F5 515 aa10.31□□□□□ -0.76
USP11-211ENST00000489111 C10orf88Q9H8K7 445 aa10.31□□□□□ -0.76
USP11-211ENST00000489111 SFXN1Q9H9B4 322 aa10.31□□□□□ -0.76
USP11-211ENST00000489111 PIDD1Q9HB75 910 aa10.31□□□□□ -0.76
USP11-211ENST00000489111 HCFC1R1Q9NWW0 138 aa10.31□□□□□ -0.76
USP11-211ENST00000489111 SEPT10Q9P0V9 454 aa10.31□□□□□ -0.76
USP11-211ENST00000489111 WHRNQ9P202 907 aa10.31□□□□□ -0.76
USP11-211ENST00000489111 PPARGC1AQ9UBK2 798 aaKnown RBP10.31□□□□□ -0.76
USP11-211ENST00000489111 MTRF1LQ9UGC7 380 aaKnown RBP10.31□□□□□ -0.76
USP11-211ENST00000489111 NEU3Q9UQ49 428 aa10.31□□□□□ -0.76
USP11-211ENST00000489111 CPQQ9Y646 472 aa10.31□□□□□ -0.76
USP11-211ENST00000489111 TYW5A2RUC4 315 aaKnown RBP10.3□□□□□ -0.76
USP11-211ENST00000489111 EPOPA6NHQ4 379 aa10.3□□□□□ -0.76
USP11-211ENST00000489111 DFFAO00273 331 aa10.3□□□□□ -0.76
USP11-211ENST00000489111 ZNF197O14709 1029 aa10.3□□□□□ -0.76
USP11-211ENST00000489111 MTSS1O43312 755 aa10.3□□□□□ -0.76
USP11-211ENST00000489111 SEC31AO94979 1220 aaKnown RBP10.3□□□□□ -0.76
USP11-211ENST00000489111 OLFM2O95897 454 aa10.3□□□□□ -0.76
USP11-211ENST00000489111 ZSCAN5DPP0CG00 497 aa10.3□□□□□ -0.76
USP11-211ENST00000489111 GJA1P17302 382 aa10.3□□□□□ -0.76
USP11-211ENST00000489111 ITIH2P19823 946 aa10.3□□□□□ -0.76
USP11-211ENST00000489111 RBL1P28749 1068 aa10.3□□□□□ -0.76
USP11-211ENST00000489111 AVPR1AP37288 418 aa10.3□□□□□ -0.76
USP11-211ENST00000489111 PLTPP55058 493 aa10.3□□□□□ -0.76
USP11-211ENST00000489111 GDF10P55107 478 aa10.3□□□□□ -0.76
USP11-211ENST00000489111 SLC7A9P82251 487 aa10.3□□□□□ -0.76
USP11-211ENST00000489111 GALNT2Q10471 571 aa10.3□□□□□ -0.76
USP11-211ENST00000489111 SLC10A2Q12908 348 aaPredicted RBP10.3□□□□□ -0.76
USP11-211ENST00000489111 PRKD1Q15139 912 aaPredicted RBP10.3□□□□□ -0.76
USP11-211ENST00000489111 TRADDQ15628 312 aa10.3□□□□□ -0.76
USP11-211ENST00000489111 NADSYN1Q6IA69 706 aa10.3□□□□□ -0.76
USP11-211ENST00000489111 FBXL22Q6P050 247 aa10.3□□□□□ -0.76
USP11-211ENST00000489111 C4orf22Q6V702 233 aa10.3□□□□□ -0.76
USP11-211ENST00000489111 ARHGEF18Q6ZSZ5 1173 aa10.3□□□□□ -0.76
USP11-211ENST00000489111 B4GALNT4Q76KP1 1039 aa10.3□□□□□ -0.76
USP11-211ENST00000489111 ZNF683Q8IZ20 524 aa10.3□□□□□ -0.76
USP11-211ENST00000489111 SHKBP1Q8TBC3 707 aa10.3□□□□□ -0.76
USP11-211ENST00000489111 AENQ8WTP8 325 aaKnown RBP10.3□□□□□ -0.76
USP11-211ENST00000489111 HTR3CQ8WXA8 447 aa10.3□□□□□ -0.76
USP11-211ENST00000489111 SMG7Q92540 1137 aaKnown RBP10.3□□□□□ -0.76
USP11-211ENST00000489111 AZIN2Q96A70 460 aa10.3□□□□□ -0.76
USP11-211ENST00000489111 RTP4Q96DX8 246 aa10.3□□□□□ -0.76
USP11-211ENST00000489111 CELF6Q96J87 481 aaKnown RBP10.3□□□□□ -0.76
USP11-211ENST00000489111 SLC22A12Q96S37 553 aa10.3□□□□□ -0.76
USP11-211ENST00000489111 CYP2S1Q96SQ9 504 aa10.3□□□□□ -0.76
USP11-211ENST00000489111 LGMNQ99538 433 aa10.3□□□□□ -0.76
USP11-211ENST00000489111 PRMT1Q99873 361 aaKnown RBP10.3□□□□□ -0.76
USP11-211ENST00000489111 PRKD2Q9BZL6 878 aa10.3□□□□□ -0.76
USP11-211ENST00000489111 PRDM12Q9H4Q4 367 aa10.3□□□□□ -0.76
USP11-211ENST00000489111 GKN1Q9NS71 199 aa10.3□□□□□ -0.76
USP11-211ENST00000489111 GRHL1Q9NZI5 618 aa10.3□□□□□ -0.76
USP11-211ENST00000489111 MPP6Q9NZW5 540 aa10.3□□□□□ -0.76
USP11-211ENST00000489111 PAK5Q9P286 719 aa10.3□□□□□ -0.76
USP11-211ENST00000489111 CFAP97Q9P2B7 532 aa10.3□□□□□ -0.76
USP11-211ENST00000489111 DNMT3BQ9UBC3 853 aaKnown RBP10.3□□□□□ -0.76
USP11-211ENST00000489111 ZMYM5Q9UJ78 669 aa10.3□□□□□ -0.76
USP11-211ENST00000489111 ANAPC5Q9UJX4 755 aa10.3□□□□□ -0.76
USP11-211ENST00000489111 SH3BP1Q9Y3L3 701 aa10.3□□□□□ -0.76
USP11-211ENST00000489111 NEU2Q9Y3R4 380 aa10.3□□□□□ -0.76
USP11-211ENST00000489111 MYO16Q9Y6X6 1858 aa10.3□□□□□ -0.76
USP11-211ENST00000489111 IGLV3-10A0A075B6K4 115 aa10.29□□□□□ -0.76
USP11-211ENST00000489111 CCDC195A0A1B0GUA6 201 aa10.29□□□□□ -0.76
USP11-211ENST00000489111 GOLGA6L7A0A1B0GV03 622 aa10.29□□□□□ -0.76
USP11-211ENST00000489111 WASH4PA8MWX3 477 aa10.29□□□□□ -0.76
USP11-211ENST00000489111 RNF103O00237 685 aa10.29□□□□□ -0.76
USP11-211ENST00000489111 ETS1P14921 441 aa10.29□□□□□ -0.76
USP11-211ENST00000489111 RPL22P35268 128 aaKnown RBP10.29□□□□□ -0.76
USP11-211ENST00000489111 GARSP41250 739 aaKnown RBP10.29□□□□□ -0.76
USP11-211ENST00000489111 MAPKAPK2P49137 400 aa10.29□□□□□ -0.76
USP11-211ENST00000489111 ITGA8P53708 1063 aa10.29□□□□□ -0.76
USP11-211ENST00000489111 BASP1P80723 227 aaKnown RBP10.29□□□□□ -0.76
USP11-211ENST00000489111 TEAD2Q15562 447 aa10.29□□□□□ -0.76
USP11-211ENST00000489111 FAM133BQ5BKY9 247 aaKnown RBP10.29□□□□□ -0.76
USP11-211ENST00000489111 BEND6Q5SZJ8 279 aaPredicted RBP10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms