RNA–Protein interactions for RNA: ENST00000489072.5

HMGN1-217, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,014 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-217ENST00000489072 NOMO3P69849 1222 aa25.85■■□□□ 1.73
HMGN1-217ENST00000489072 FOXK2Q01167 660 aa25.85■■□□□ 1.73
HMGN1-217ENST00000489072 NME3Q13232 169 aa25.85■■□□□ 1.73
HMGN1-217ENST00000489072 CAMK2GQ13555 558 aaPredicted RBP25.85■■□□□ 1.73
HMGN1-217ENST00000489072 CDH18Q13634 790 aa25.85■■□□□ 1.73
HMGN1-217ENST00000489072 LYSMD4Q5XG99 296 aa25.85■■□□□ 1.73
HMGN1-217ENST00000489072 ERICH1Q86X53 443 aa25.85■■□□□ 1.73
HMGN1-217ENST00000489072 ANKRD20A12PQ8NF67 263 aa25.85■■□□□ 1.73
HMGN1-217ENST00000489072 CPA5Q8WXQ8 436 aa25.85■■□□□ 1.73
HMGN1-217ENST00000489072 RNF34Q969K3 372 aa25.85■■□□□ 1.73
HMGN1-217ENST00000489072 TTC17Q96AE7 1141 aa25.85■■□□□ 1.73
HMGN1-217ENST00000489072 NPY6RQ99463 290 aa25.85■■□□□ 1.73
HMGN1-217ENST00000489072 USP36Q9P275 1121 aaKnown RBP25.85■■□□□ 1.73
HMGN1-217ENST00000489072 SLC12A6Q9UHW9 1150 aa25.85■■□□□ 1.73
HMGN1-217ENST00000489072 ATXN2Q99700 1313 aaKnown RBP25.85■■□□□ 1.73
HMGN1-217ENST00000489072 NUMA1Q14980 2115 aa25.84■■□□□ 1.73
HMGN1-217ENST00000489072 MED19A0JLT2 244 aaPredicted RBP25.84■■□□□ 1.73
HMGN1-217ENST00000489072 LNP1A1A4G5 178 aa25.84■■□□□ 1.73
HMGN1-217ENST00000489072 F5H5T6 163 aa25.84■■□□□ 1.73
HMGN1-217ENST00000489072 M0QYT0 321 aa25.84■■□□□ 1.73
HMGN1-217ENST00000489072 ATP5BP06576 529 aaKnown RBP25.84■■□□□ 1.73
HMGN1-217ENST00000489072 ATP1A3P13637 1013 aa25.84■■□□□ 1.73
HMGN1-217ENST00000489072 CHRNB2P17787 502 aa25.84■■□□□ 1.73
HMGN1-217ENST00000489072 ABCB4P21439 1286 aa25.84■■□□□ 1.73
HMGN1-217ENST00000489072 SCNN1AP37088 669 aa25.84■■□□□ 1.73
HMGN1-217ENST00000489072 CSKP41240 450 aa25.84■■□□□ 1.73
HMGN1-217ENST00000489072 ANO6Q4KMQ2 910 aa25.84■■□□□ 1.73
HMGN1-217ENST00000489072 STPG1Q5TH74 334 aa25.84■■□□□ 1.73
HMGN1-217ENST00000489072 NAA35Q5VZE5 725 aa25.84■■□□□ 1.73
HMGN1-217ENST00000489072 CIR1Q86X95 450 aaPredicted RBP25.84■■□□□ 1.73
HMGN1-217ENST00000489072 CACUL1Q86Y37 369 aa25.84■■□□□ 1.73
HMGN1-217ENST00000489072 SLC41A1Q8IVJ1 513 aa25.84■■□□□ 1.73
HMGN1-217ENST00000489072 SIPA1Q96FS4 1042 aa25.84■■□□□ 1.73
HMGN1-217ENST00000489072 MYO19Q96H55 970 aa25.84■■□□□ 1.73
HMGN1-217ENST00000489072 ITM2CQ9NQX7 267 aa25.84■■□□□ 1.73
HMGN1-217ENST00000489072 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP25.84■■□□□ 1.73
HMGN1-217ENST00000489072 CDK11BP21127 795 aaKnown RBP25.83■■□□□ 1.73
HMGN1-217ENST00000489072 FMO1Q01740 532 aa25.83■■□□□ 1.73
HMGN1-217ENST00000489072 CDR2Q01850 454 aa25.83■■□□□ 1.73
HMGN1-217ENST00000489072 UBXN1Q04323 297 aa25.83■■□□□ 1.73
HMGN1-217ENST00000489072 FAM102AQ5T9C2 384 aaPredicted RBP25.83■■□□□ 1.73
HMGN1-217ENST00000489072 CAVIN1Q6NZI2 390 aaKnown RBP25.83■■□□□ 1.73
HMGN1-217ENST00000489072 ZNF677Q86XU0 584 aa25.83■■□□□ 1.73
HMGN1-217ENST00000489072 SYT12Q8IV01 421 aa25.83■■□□□ 1.73
HMGN1-217ENST00000489072 OR2T3Q8NH03 318 aa25.83■■□□□ 1.73
HMGN1-217ENST00000489072 NT5C3BQ969T7 300 aa25.83■■□□□ 1.73
HMGN1-217ENST00000489072 EDEM2Q9BV94 578 aa25.83■■□□□ 1.73
HMGN1-217ENST00000489072 PIGVQ9NUD9 493 aa25.83■■□□□ 1.73
HMGN1-217ENST00000489072 PILRBQ9UKJ0 227 aa25.83■■□□□ 1.73
HMGN1-217ENST00000489072 DAAM1Q9Y4D1 1078 aa25.83■■□□□ 1.73
HMGN1-217ENST00000489072 H0Y626 953 aa25.82■■□□□ 1.72
HMGN1-217ENST00000489072 KHNYNO15037 678 aaKnown RBP25.82■■□□□ 1.72
HMGN1-217ENST00000489072 TPMTP51580 245 aa25.82■■□□□ 1.72
HMGN1-217ENST00000489072 IRX4P78413 519 aa25.82■■□□□ 1.72
HMGN1-217ENST00000489072 ZNF33AQ06730 810 aa25.82■■□□□ 1.72
HMGN1-217ENST00000489072 PITRM1Q5JRX3 1037 aa25.82■■□□□ 1.72
HMGN1-217ENST00000489072 PEAR1Q5VY43 1037 aaPredicted RBP25.82■■□□□ 1.72
HMGN1-217ENST00000489072 TRNP1Q6NT89 227 aa25.82■■□□□ 1.72
HMGN1-217ENST00000489072 FBXL22Q6P050 247 aa25.82■■□□□ 1.72
HMGN1-217ENST00000489072 NEK11Q8NG66 645 aa25.82■■□□□ 1.72
HMGN1-217ENST00000489072 PRCCQ92733 491 aaPredicted RBP25.82■■□□□ 1.72
HMGN1-217ENST00000489072 MRGPRX3Q96LB0 322 aa25.82■■□□□ 1.72
HMGN1-217ENST00000489072 PCMTD1Q96MG8 357 aaPredicted RBP25.82■■□□□ 1.72
HMGN1-217ENST00000489072 SPAG5Q96R06 1193 aa25.82■■□□□ 1.72
HMGN1-217ENST00000489072 ERGIC2Q96RQ1 377 aa25.82■■□□□ 1.72
HMGN1-217ENST00000489072 MTG2Q9H4K7 406 aa25.82■■□□□ 1.72
HMGN1-217ENST00000489072 PRSS16Q9NQE7 514 aa25.82■■□□□ 1.72
HMGN1-217ENST00000489072 ANLNQ9NQW6 1124 aa25.82■■□□□ 1.72
HMGN1-217ENST00000489072 RRN3Q9NYV6 651 aa25.82■■□□□ 1.72
HMGN1-217ENST00000489072 GOLGA8SH3BPF8 625 aa25.81■■□□□ 1.72
HMGN1-217ENST00000489072 CYP1A1P04798 512 aaPredicted RBP25.81■■□□□ 1.72
HMGN1-217ENST00000489072 CD6P30203 668 aa25.81■■□□□ 1.72
HMGN1-217ENST00000489072 FLT3P36888 993 aa25.81■■□□□ 1.72
HMGN1-217ENST00000489072 GGCXP38435 758 aa25.81■■□□□ 1.72
HMGN1-217ENST00000489072 STAT1P42224 750 aa25.81■■□□□ 1.72
HMGN1-217ENST00000489072 CTSOP43234 321 aaPredicted RBP25.81■■□□□ 1.72
HMGN1-217ENST00000489072 SULT1E1P49888 294 aa25.81■■□□□ 1.72
HMGN1-217ENST00000489072 IRAK1P51617 712 aa25.81■■□□□ 1.72
HMGN1-217ENST00000489072 CENPCQ03188 943 aa25.81■■□□□ 1.72
HMGN1-217ENST00000489072 CCDC117Q8IWD4 279 aaPredicted RBP25.81■■□□□ 1.72
HMGN1-217ENST00000489072 APCDD1Q8J025 514 aa25.81■■□□□ 1.72
HMGN1-217ENST00000489072 CCAR2Q8N163 923 aaKnown RBP25.81■■□□□ 1.72
HMGN1-217ENST00000489072 IGSF8Q969P0 613 aa25.81■■□□□ 1.72
HMGN1-217ENST00000489072 TOE1Q96GM8 510 aaKnown RBP25.81■■□□□ 1.72
HMGN1-217ENST00000489072 HSPA12BQ96MM6 686 aa25.81■■□□□ 1.72
HMGN1-217ENST00000489072 TBCBQ99426 244 aa25.81■■□□□ 1.72
HMGN1-217ENST00000489072 WSB2Q9NYS7 404 aaPredicted RBP25.81■■□□□ 1.72
HMGN1-217ENST00000489072 KIAA1522Q9P206 1035 aaPredicted RBP25.81■■□□□ 1.72
HMGN1-217ENST00000489072 EVLQ9UI08 416 aaPredicted RBP25.81■■□□□ 1.72
HMGN1-217ENST00000489072 HS3ST4Q9Y661 456 aa25.81■■□□□ 1.72
HMGN1-217ENST00000489072 ADAMTS9Q9P2N4 1935 aa25.8■■□□□ 1.72
HMGN1-217ENST00000489072 I6L893 689 aaPredicted RBP25.8■■□□□ 1.72
HMGN1-217ENST00000489072 TM4SF5O14894 197 aa25.8■■□□□ 1.72
HMGN1-217ENST00000489072 NDUFS2O75306 463 aa25.8■■□□□ 1.72
HMGN1-217ENST00000489072 PAGE1O75459 146 aa25.8■■□□□ 1.72
HMGN1-217ENST00000489072 ADCY5O95622 1261 aa25.8■■□□□ 1.72
HMGN1-217ENST00000489072 ASLP04424 464 aa25.8■■□□□ 1.72
HMGN1-217ENST00000489072 C7P10643 843 aa25.8■■□□□ 1.72
HMGN1-217ENST00000489072 CXCR3P49682 368 aa25.8■■□□□ 1.72
HMGN1-217ENST00000489072 AUHQ13825 339 aaKnown RBP25.8■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms