RNA–Protein interactions for RNA: ENST00000488767.1

PHF1-210, Transcript of PHD finger protein 1, humanhuman

TSL 3

Gene PHF1, Length 849 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-210ENST00000488767 PTP4A2Q12974 167 aa13.31□□□□□ -0.28
PHF1-210ENST00000488767 ZNF177Q13360 481 aaPredicted RBP13.31□□□□□ -0.28
PHF1-210ENST00000488767 SIM2Q14190 667 aaPredicted RBP13.31□□□□□ -0.28
PHF1-210ENST00000488767 FBXL22Q6P050 247 aa13.31□□□□□ -0.28
PHF1-210ENST00000488767 FAM131BQ86XD5 332 aa13.31□□□□□ -0.28
PHF1-210ENST00000488767 FAM172AQ8WUF8 416 aa13.31□□□□□ -0.28
PHF1-210ENST00000488767 HMGB4Q8WW32 186 aa13.31□□□□□ -0.28
PHF1-210ENST00000488767 C1orf74Q96LT6 269 aa13.31□□□□□ -0.28
PHF1-210ENST00000488767 HAPLN3Q96S86 360 aa13.31□□□□□ -0.28
PHF1-210ENST00000488767 DEF6Q9H4E7 631 aa13.31□□□□□ -0.28
PHF1-210ENST00000488767 CACNA2D2Q9NY47 1150 aa13.31□□□□□ -0.28
PHF1-210ENST00000488767 THAP10Q9P2Z0 257 aaPredicted RBP13.31□□□□□ -0.28
PHF1-210ENST00000488767 GMEB2Q9UKD1 530 aa13.31□□□□□ -0.28
PHF1-210ENST00000488767 SMG5Q9UPR3 1016 aaKnown RBP13.31□□□□□ -0.28
PHF1-210ENST00000488767 STON1Q9Y6Q2 735 aa13.31□□□□□ -0.28
PHF1-210ENST00000488767 MYOFQ9NZM1 2061 aa13.3□□□□□ -0.28
PHF1-210ENST00000488767 PRR23AA6NEV1 266 aa13.3□□□□□ -0.28
PHF1-210ENST00000488767 ADCY5O95622 1261 aa13.3□□□□□ -0.28
PHF1-210ENST00000488767 DLDP09622 509 aaKnown RBP13.3□□□□□ -0.28
PHF1-210ENST00000488767 TFE3P19532 575 aaPredicted RBP13.3□□□□□ -0.28
PHF1-210ENST00000488767 RFC1P35251 1148 aaPredicted RBP13.3□□□□□ -0.28
PHF1-210ENST00000488767 NNMTP40261 264 aa13.3□□□□□ -0.28
PHF1-210ENST00000488767 ZNF143P52747 638 aaPredicted RBP13.3□□□□□ -0.28
PHF1-210ENST00000488767 DMWDQ09019 674 aa13.3□□□□□ -0.28
PHF1-210ENST00000488767 ELF2Q15723 593 aa13.3□□□□□ -0.28
PHF1-210ENST00000488767 CCDC14Q49A88 953 aa13.3□□□□□ -0.28
PHF1-210ENST00000488767 OTUD1Q5VV17 481 aaPredicted RBP13.3□□□□□ -0.28
PHF1-210ENST00000488767 MBLAC2Q68D91 279 aa13.3□□□□□ -0.28
PHF1-210ENST00000488767 RNF43Q68DV7 783 aa13.3□□□□□ -0.28
PHF1-210ENST00000488767 WDR59Q6PJI9 974 aa13.3□□□□□ -0.28
PHF1-210ENST00000488767 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.3□□□□□ -0.28
PHF1-210ENST00000488767 ALYREFQ86V81 257 aaKnown RBP13.3□□□□□ -0.28
PHF1-210ENST00000488767 CNGA4Q8IV77 575 aa13.3□□□□□ -0.28
PHF1-210ENST00000488767 VSTM4Q8IW00 320 aa13.3□□□□□ -0.28
PHF1-210ENST00000488767 CCAR2Q8N163 923 aaKnown RBP13.3□□□□□ -0.28
PHF1-210ENST00000488767 OR8K1Q8NGG5 319 aa13.3□□□□□ -0.28
PHF1-210ENST00000488767 JOSD2Q8TAC2 188 aa13.3□□□□□ -0.28
PHF1-210ENST00000488767 GAB3Q8WWW8 586 aa13.3□□□□□ -0.28
PHF1-210ENST00000488767 ZNF653Q96CK0 615 aa13.3□□□□□ -0.28
PHF1-210ENST00000488767 PHOX2BQ99453 314 aa13.3□□□□□ -0.28
PHF1-210ENST00000488767 PRMT1Q99873 361 aaKnown RBP13.3□□□□□ -0.28
PHF1-210ENST00000488767 GABRG3Q99928 467 aa13.3□□□□□ -0.28
PHF1-210ENST00000488767 NCAPGQ9BPX3 1015 aa13.3□□□□□ -0.28
PHF1-210ENST00000488767 CNPY3Q9BT09 278 aa13.3□□□□□ -0.28
PHF1-210ENST00000488767 ZDHHC4Q9NPG8 344 aa13.3□□□□□ -0.28
PHF1-210ENST00000488767 NCDNQ9UBB6 729 aa13.3□□□□□ -0.28
PHF1-210ENST00000488767 CNOT8Q9UFF9 292 aaKnown RBP13.3□□□□□ -0.28
PHF1-210ENST00000488767 ADAMTS1Q9UHI8 967 aa13.3□□□□□ -0.28
PHF1-210ENST00000488767 CLEC4EQ9ULY5 219 aa13.3□□□□□ -0.28
PHF1-210ENST00000488767 PIEZO1Q92508 2521 aa13.3□□□□□ -0.28
PHF1-210ENST00000488767 ZFHX2Q9C0A1 2572 aaPredicted RBP13.29□□□□□ -0.28
PHF1-210ENST00000488767 DDX3XO00571 662 aaKnown RBP eCLIP13.29□□□□□ -0.28
PHF1-210ENST00000488767 SRGAP2O75044 1071 aa13.29□□□□□ -0.28
PHF1-210ENST00000488767 ADAM23O75077 832 aa13.29□□□□□ -0.28
PHF1-210ENST00000488767 RNF8O76064 485 aa13.29□□□□□ -0.28
PHF1-210ENST00000488767 ENDOD1O94919 500 aa13.29□□□□□ -0.28
PHF1-210ENST00000488767 EPHX1P07099 455 aa13.29□□□□□ -0.28
PHF1-210ENST00000488767 CD70P32970 193 aa13.29□□□□□ -0.28
PHF1-210ENST00000488767 AIF1P55008 147 aa13.29□□□□□ -0.28
PHF1-210ENST00000488767 CDH4P55283 916 aa13.29□□□□□ -0.28
PHF1-210ENST00000488767 SULT2A1Q06520 285 aa13.29□□□□□ -0.28
PHF1-210ENST00000488767 LMAN2Q12907 356 aa13.29□□□□□ -0.28
PHF1-210ENST00000488767 ZNF234Q14588 700 aa13.29□□□□□ -0.28
PHF1-210ENST00000488767 C15orf59Q2T9L4 293 aaPredicted RBP13.29□□□□□ -0.28
PHF1-210ENST00000488767 EFHC2Q5JST6 749 aa13.29□□□□□ -0.28
PHF1-210ENST00000488767 C6orf118Q5T5N4 469 aa13.29□□□□□ -0.28
PHF1-210ENST00000488767 E4F1Q66K89 784 aaPredicted RBP13.29□□□□□ -0.28
PHF1-210ENST00000488767 SCYL2Q6P3W7 929 aa13.29□□□□□ -0.28
PHF1-210ENST00000488767 TMEM92Q6UXU6 159 aa13.29□□□□□ -0.28
PHF1-210ENST00000488767 RASSF3Q86WH2 238 aa13.29□□□□□ -0.28
PHF1-210ENST00000488767 OLIG1Q8TAK6 271 aa13.29□□□□□ -0.28
PHF1-210ENST00000488767 P2RY11Q96G91 374 aa13.29□□□□□ -0.28
PHF1-210ENST00000488767 ACOX2Q99424 681 aa13.29□□□□□ -0.28
PHF1-210ENST00000488767 TPSD1Q9BZJ3 242 aa13.29□□□□□ -0.28
PHF1-210ENST00000488767 FBRSQ9HAH7 460 aa13.29□□□□□ -0.28
PHF1-210ENST00000488767 POLR3BQ9NW08 1133 aaPredicted RBP13.29□□□□□ -0.28
PHF1-210ENST00000488767 TAS2R14Q9NYV8 317 aa13.29□□□□□ -0.28
PHF1-210ENST00000488767 CALCOCO1Q9P1Z2 691 aa13.29□□□□□ -0.28
PHF1-210ENST00000488767 E9PAM4 449 aa13.28□□□□□ -0.28
PHF1-210ENST00000488767 MAP3K13O43283 966 aa13.28□□□□□ -0.28
PHF1-210ENST00000488767 ZNF217O75362 1048 aa13.28□□□□□ -0.28
PHF1-210ENST00000488767 RHOBTB1O94844 696 aa13.28□□□□□ -0.28
PHF1-210ENST00000488767 GJB6O95452 261 aa13.28□□□□□ -0.28
PHF1-210ENST00000488767 RHOCP08134 193 aa13.28□□□□□ -0.28
PHF1-210ENST00000488767 PSMA2P25787 234 aa13.28□□□□□ -0.28
PHF1-210ENST00000488767 ADRA1BP35368 520 aa13.28□□□□□ -0.28
PHF1-210ENST00000488767 GGCXP38435 758 aa13.28□□□□□ -0.28
PHF1-210ENST00000488767 CSKP41240 450 aa13.28□□□□□ -0.28
PHF1-210ENST00000488767 IL12RB1P42701 662 aa13.28□□□□□ -0.28
PHF1-210ENST00000488767 ATXN1P54253 815 aaKnown RBP13.28□□□□□ -0.28
PHF1-210ENST00000488767 MAMLD1Q13495 774 aa13.28□□□□□ -0.28
PHF1-210ENST00000488767 FUT11Q495W5 492 aa13.28□□□□□ -0.28
PHF1-210ENST00000488767 PITRM1Q5JRX3 1037 aa13.28□□□□□ -0.28
PHF1-210ENST00000488767 HGSNATQ68CP4 663 aa13.28□□□□□ -0.28
PHF1-210ENST00000488767 LAIR1Q6GTX8 287 aa13.28□□□□□ -0.28
PHF1-210ENST00000488767 TRNP1Q6NT89 227 aa13.28□□□□□ -0.28
PHF1-210ENST00000488767 TMC6Q7Z403 805 aa13.28□□□□□ -0.28
PHF1-210ENST00000488767 BNIPLQ7Z465 357 aa13.28□□□□□ -0.28
PHF1-210ENST00000488767 KIAA0907Q7Z7F0 614 aaPredicted RBP13.28□□□□□ -0.28
PHF1-210ENST00000488767 SLFN11Q7Z7L1 901 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms