RNA–Protein interactions for RNA: ENST00000488683.1

CLIC4-202, Transcript of chloride intracellular channel 4, humanhuman

TSL 2

Gene CLIC4, Length 2,723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-202ENST00000488683 SNAPC2Q13487 334 aa13.02□□□□□ -0.32
CLIC4-202ENST00000488683 PAQR9Q6ZVX9 377 aa13.02□□□□□ -0.32
CLIC4-202ENST00000488683 RASSF3Q86WH2 238 aa13.02□□□□□ -0.32
CLIC4-202ENST00000488683 CRLF3Q8IUI8 442 aa13.02□□□□□ -0.32
CLIC4-202ENST00000488683 CRYBG2Q8N1P7 616 aa13.02□□□□□ -0.32
CLIC4-202ENST00000488683 NPWQ8N729 165 aa13.02□□□□□ -0.32
CLIC4-202ENST00000488683 GSTCDQ8NEC7 633 aa13.02□□□□□ -0.32
CLIC4-202ENST00000488683 RNF139Q8WU17 664 aa13.02□□□□□ -0.32
CLIC4-202ENST00000488683 GORASP1Q9BQQ3 440 aa13.02□□□□□ -0.32
CLIC4-202ENST00000488683 XAB2Q9HCS7 855 aaKnown RBP13.02□□□□□ -0.32
CLIC4-202ENST00000488683 MKS1Q9NXB0 559 aa13.02□□□□□ -0.32
CLIC4-202ENST00000488683 FZD10Q9ULW2 581 aa13.02□□□□□ -0.32
CLIC4-202ENST00000488683 RPS6KL1Q9Y6S9 549 aa13.02□□□□□ -0.32
CLIC4-202ENST00000488683 A0A0A0MRY4 1105 aa13.02□□□□□ -0.33
CLIC4-202ENST00000488683 GOLGA8QA0A0J9YX86 632 aa13.02□□□□□ -0.33
CLIC4-202ENST00000488683 GOLGA8OA6NCC3 632 aa13.02□□□□□ -0.33
CLIC4-202ENST00000488683 YJEFN3A6XGL0 299 aa13.02□□□□□ -0.33
CLIC4-202ENST00000488683 CAPN14A8MX76 684 aa13.02□□□□□ -0.33
CLIC4-202ENST00000488683 E7ENQ6 273 aa13.02□□□□□ -0.33
CLIC4-202ENST00000488683 GOLGA8NF8WBI6 632 aa13.02□□□□□ -0.33
CLIC4-202ENST00000488683 SNNO75324 88 aaPredicted RBP13.02□□□□□ -0.33
CLIC4-202ENST00000488683 USP17L7P0C7H9 530 aa13.02□□□□□ -0.33
CLIC4-202ENST00000488683 FGF3P11487 239 aaPredicted RBP13.02□□□□□ -0.33
CLIC4-202ENST00000488683 ARSAP15289 507 aa13.02□□□□□ -0.33
CLIC4-202ENST00000488683 CRHR1P34998 444 aa13.02□□□□□ -0.33
CLIC4-202ENST00000488683 MSX2P35548 267 aaPredicted RBP13.02□□□□□ -0.33
CLIC4-202ENST00000488683 AVPR1AP37288 418 aa13.02□□□□□ -0.33
CLIC4-202ENST00000488683 ARL4AP40617 200 aa13.02□□□□□ -0.33
CLIC4-202ENST00000488683 ATXN3P54252 364 aaPredicted RBP13.02□□□□□ -0.33
CLIC4-202ENST00000488683 SLC8A3P57103 927 aa13.02□□□□□ -0.33
CLIC4-202ENST00000488683 ITGA9Q13797 1035 aa13.02□□□□□ -0.33
CLIC4-202ENST00000488683 KRT72Q14CN4 511 aa13.02□□□□□ -0.33
CLIC4-202ENST00000488683 DUSP28Q4G0W2 176 aa13.02□□□□□ -0.33
CLIC4-202ENST00000488683 LGSNQ5TDP6 509 aa13.02□□□□□ -0.33
CLIC4-202ENST00000488683 C9orf131Q5VYM1 1079 aa13.02□□□□□ -0.33
CLIC4-202ENST00000488683 NOTUMQ6P988 496 aa13.02□□□□□ -0.33
CLIC4-202ENST00000488683 PHC3Q8NDX5 983 aa13.02□□□□□ -0.33
CLIC4-202ENST00000488683 APPL2Q8NEU8 664 aa13.02□□□□□ -0.33
CLIC4-202ENST00000488683 DNAJC9Q8WXX5 260 aa13.02□□□□□ -0.33
CLIC4-202ENST00000488683 SPATA13Q96N96 652 aa13.02□□□□□ -0.33
CLIC4-202ENST00000488683 GCOM2Q9BZD3 368 aaPredicted RBP13.02□□□□□ -0.33
CLIC4-202ENST00000488683 NUDT5Q9UKK9 219 aa13.02□□□□□ -0.33
CLIC4-202ENST00000488683 ENO4A6NNW6 628 aa13.01□□□□□ -0.33
CLIC4-202ENST00000488683 HNRNPCL1O60812 293 aaKnown RBP13.01□□□□□ -0.33
CLIC4-202ENST00000488683 SMNDC1O75940 238 aaKnown RBP eCLIP13.01□□□□□ -0.33
CLIC4-202ENST00000488683 HOXD8P13378 290 aaPredicted RBP13.01□□□□□ -0.33
CLIC4-202ENST00000488683 GLRBP48167 497 aa13.01□□□□□ -0.33
CLIC4-202ENST00000488683 NIPAL4Q0D2K0 466 aa13.01□□□□□ -0.33
CLIC4-202ENST00000488683 ZNF460Q14592 562 aa13.01□□□□□ -0.33
CLIC4-202ENST00000488683 PCLAFQ15004 111 aa13.01□□□□□ -0.33
CLIC4-202ENST00000488683 CCL14Q16627 93 aa13.01□□□□□ -0.33
CLIC4-202ENST00000488683 NAPRTQ6XQN6 538 aa13.01□□□□□ -0.33
CLIC4-202ENST00000488683 RIPOR1Q6ZS17 1223 aa13.01□□□□□ -0.33
CLIC4-202ENST00000488683 GPR142Q7Z601 462 aa13.01□□□□□ -0.33
CLIC4-202ENST00000488683 B3GALNT2Q8NCR0 500 aa13.01□□□□□ -0.33
CLIC4-202ENST00000488683 SMC1BQ8NDV3 1235 aa13.01□□□□□ -0.33
CLIC4-202ENST00000488683 SYT15Q9BQS2 421 aa13.01□□□□□ -0.33
CLIC4-202ENST00000488683 KCNK4Q9NYG8 393 aa13.01□□□□□ -0.33
CLIC4-202ENST00000488683 CLEC11AQ9Y240 323 aa13.01□□□□□ -0.33
CLIC4-202ENST00000488683 ITGA2BP08514 1039 aa13.01□□□□□ -0.33
CLIC4-202ENST00000488683 GSTA2P09210 222 aa13.01□□□□□ -0.33
CLIC4-202ENST00000488683 YBX3P16989 372 aaKnown RBP eCLIP13.01□□□□□ -0.33
CLIC4-202ENST00000488683 ZFXP17010 805 aaPredicted RBP13.01□□□□□ -0.33
CLIC4-202ENST00000488683 DESP17661 470 aa13.01□□□□□ -0.33
CLIC4-202ENST00000488683 NCF2P19878 526 aaPredicted RBP13.01□□□□□ -0.33
CLIC4-202ENST00000488683 MATKP42679 507 aa13.01□□□□□ -0.33
CLIC4-202ENST00000488683 SLC1A6P48664 564 aa13.01□□□□□ -0.33
CLIC4-202ENST00000488683 DGKDQ16760 1214 aa13.01□□□□□ -0.33
CLIC4-202ENST00000488683 HSP90AA5PQ58FG0 334 aa13.01□□□□□ -0.33
CLIC4-202ENST00000488683 TEDDM1Q5T9Z0 273 aa13.01□□□□□ -0.33
CLIC4-202ENST00000488683 STEAP4Q687X5 459 aa13.01□□□□□ -0.33
CLIC4-202ENST00000488683 MBLAC2Q68D91 279 aa13.01□□□□□ -0.33
CLIC4-202ENST00000488683 DPY19L2Q6NUT2 758 aa13.01□□□□□ -0.33
CLIC4-202ENST00000488683 ARHGAP36Q6ZRI8 547 aa13.01□□□□□ -0.33
CLIC4-202ENST00000488683 PHTF2Q8N3S3 785 aa13.01□□□□□ -0.33
CLIC4-202ENST00000488683 CFAP61Q8NHU2 1237 aa13.01□□□□□ -0.33
CLIC4-202ENST00000488683 PYDC1Q8WXC3 89 aa13.01□□□□□ -0.33
CLIC4-202ENST00000488683 ZNF669Q96BR6 464 aaPredicted RBP13.01□□□□□ -0.33
CLIC4-202ENST00000488683 MTBPQ96DY7 904 aa13.01□□□□□ -0.33
CLIC4-202ENST00000488683 MAML3Q96JK9 1138 aa13.01□□□□□ -0.33
CLIC4-202ENST00000488683 PPP1R12CQ9BZL4 782 aa13.01□□□□□ -0.33
CLIC4-202ENST00000488683 FLRT1Q9NZU1 646 aa13.01□□□□□ -0.33
CLIC4-202ENST00000488683 KLHL8Q9P2G9 620 aaPredicted RBP13.01□□□□□ -0.33
CLIC4-202ENST00000488683 PPM1HQ9ULR3 514 aa13.01□□□□□ -0.33
CLIC4-202ENST00000488683 UBQLN1Q9UMX0 589 aaKnown RBP13.01□□□□□ -0.33
CLIC4-202ENST00000488683 LRRC42Q9Y546 428 aa13.01□□□□□ -0.33
CLIC4-202ENST00000488683 TSC2P49815 1807 aa13.01□□□□□ -0.33
CLIC4-202ENST00000488683 CCL15-CCL14A0A0B4J2E2 113 aa13□□□□□ -0.33
CLIC4-202ENST00000488683 ARHGAP42A6NI28 874 aa13□□□□□ -0.33
CLIC4-202ENST00000488683 NVLO15381 856 aaKnown RBP13□□□□□ -0.33
CLIC4-202ENST00000488683 ALDH1A2O94788 518 aa13□□□□□ -0.33
CLIC4-202ENST00000488683 MYCNP04198 464 aaPredicted RBP13□□□□□ -0.33
CLIC4-202ENST00000488683 FYNP06241 537 aa13□□□□□ -0.33
CLIC4-202ENST00000488683 CTSHP09668 335 aa13□□□□□ -0.33
CLIC4-202ENST00000488683 LINGO3P0C6S8 592 aa13□□□□□ -0.33
CLIC4-202ENST00000488683 DARSP14868 501 aaKnown RBP13□□□□□ -0.33
CLIC4-202ENST00000488683 TYK2P29597 1187 aa13□□□□□ -0.33
CLIC4-202ENST00000488683 TKTL1P51854 596 aa13□□□□□ -0.33
CLIC4-202ENST00000488683 LILRA4P59901 499 aa13□□□□□ -0.33
CLIC4-202ENST00000488683 ITGA7Q13683 1181 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms