RNA–Protein interactions for RNA: ENST00000488494.5

ITGB1-215, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-215ENST00000488494 SLC12A6Q9UHW9 1150 aa18.36■□□□□ 0.53
ITGB1-215ENST00000488494 NUP205Q92621 2012 aa18.35■□□□□ 0.53
ITGB1-215ENST00000488494 MED19A0JLT2 244 aaPredicted RBP18.35■□□□□ 0.53
ITGB1-215ENST00000488494 DCDC2BA2VCK2 349 aa18.35■□□□□ 0.53
ITGB1-215ENST00000488494 H0Y626 953 aa18.35■□□□□ 0.53
ITGB1-215ENST00000488494 GOLGA8SH3BPF8 625 aa18.35■□□□□ 0.53
ITGB1-215ENST00000488494 M0QYT0 321 aa18.35■□□□□ 0.53
ITGB1-215ENST00000488494 ATP1A3P13637 1013 aa18.35■□□□□ 0.53
ITGB1-215ENST00000488494 TFE3P19532 575 aaPredicted RBP18.35■□□□□ 0.53
ITGB1-215ENST00000488494 CDK11BP21127 795 aaKnown RBP18.35■□□□□ 0.53
ITGB1-215ENST00000488494 ITPKAP23677 461 aa18.35■□□□□ 0.53
ITGB1-215ENST00000488494 NOS2P35228 1153 aa18.35■□□□□ 0.53
ITGB1-215ENST00000488494 GGCXP38435 758 aa18.35■□□□□ 0.53
ITGB1-215ENST00000488494 CSKP41240 450 aa18.35■□□□□ 0.53
ITGB1-215ENST00000488494 MATKP42679 507 aa18.35■□□□□ 0.53
ITGB1-215ENST00000488494 GABRB2P47870 512 aa18.35■□□□□ 0.53
ITGB1-215ENST00000488494 SULT1E1P49888 294 aa18.35■□□□□ 0.53
ITGB1-215ENST00000488494 LIMK1P53667 647 aa18.35■□□□□ 0.53
ITGB1-215ENST00000488494 RNASE9P60153 205 aaKnown RBP18.35■□□□□ 0.53
ITGB1-215ENST00000488494 FOXK2Q01167 660 aa18.35■□□□□ 0.53
ITGB1-215ENST00000488494 CENPCQ03188 943 aa18.35■□□□□ 0.53
ITGB1-215ENST00000488494 UBXN1Q04323 297 aa18.35■□□□□ 0.53
ITGB1-215ENST00000488494 CAMK2GQ13555 558 aaPredicted RBP18.35■□□□□ 0.53
ITGB1-215ENST00000488494 SPDYCQ5MJ68 293 aa18.35■□□□□ 0.53
ITGB1-215ENST00000488494 STPG1Q5TH74 334 aa18.35■□□□□ 0.53
ITGB1-215ENST00000488494 APTXQ7Z2E3 356 aaKnown RBP18.35■□□□□ 0.53
ITGB1-215ENST00000488494 TMPRSS6Q8IU80 811 aa18.35■□□□□ 0.53
ITGB1-215ENST00000488494 NEK11Q8NG66 645 aa18.35■□□□□ 0.53
ITGB1-215ENST00000488494 CPA5Q8WXQ8 436 aa18.35■□□□□ 0.53
ITGB1-215ENST00000488494 PRCCQ92733 491 aaPredicted RBP18.35■□□□□ 0.53
ITGB1-215ENST00000488494 C18orf8Q96DM3 657 aa18.35■□□□□ 0.53
ITGB1-215ENST00000488494 SIPA1Q96FS4 1042 aa18.35■□□□□ 0.53
ITGB1-215ENST00000488494 HSPA12BQ96MM6 686 aa18.35■□□□□ 0.53
ITGB1-215ENST00000488494 ADAM33Q9BZ11 813 aa18.35■□□□□ 0.53
ITGB1-215ENST00000488494 NAT10Q9H0A0 1025 aaKnown RBP18.35■□□□□ 0.53
ITGB1-215ENST00000488494 PIGVQ9NUD9 493 aa18.35■□□□□ 0.53
ITGB1-215ENST00000488494 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.35■□□□□ 0.537e-9■□□□□ 9.6
ITGB1-215ENST00000488494 INTS6Q9UL03 887 aaKnown RBP18.35■□□□□ 0.53
ITGB1-215ENST00000488494 DAAM1Q9Y4D1 1078 aa18.35■□□□□ 0.53
ITGB1-215ENST00000488494 KHNYNO15037 678 aaKnown RBP18.34■□□□□ 0.53
ITGB1-215ENST00000488494 NDUFS2O75306 463 aa18.34■□□□□ 0.53
ITGB1-215ENST00000488494 SCNN1AP37088 669 aa18.34■□□□□ 0.53
ITGB1-215ENST00000488494 CDR2Q01850 454 aa18.34■□□□□ 0.53
ITGB1-215ENST00000488494 PITRM1Q5JRX3 1037 aa18.34■□□□□ 0.53
ITGB1-215ENST00000488494 RABGAP1LQ5R372 815 aa18.34■□□□□ 0.53
ITGB1-215ENST00000488494 TTC39BQ5VTQ0 682 aaPredicted RBP18.34■□□□□ 0.53
ITGB1-215ENST00000488494 ZNF677Q86XU0 584 aa18.34■□□□□ 0.53
ITGB1-215ENST00000488494 SYT12Q8IV01 421 aa18.34■□□□□ 0.53
ITGB1-215ENST00000488494 OR2T3Q8NH03 318 aa18.34■□□□□ 0.53
ITGB1-215ENST00000488494 NPY6RQ99463 290 aa18.34■□□□□ 0.53
ITGB1-215ENST00000488494 TMEM74BQ9NUR3 256 aa18.34■□□□□ 0.53
ITGB1-215ENST00000488494 STAP1Q9ULZ2 295 aa18.34■□□□□ 0.53
ITGB1-215ENST00000488494 ASLP04424 464 aa18.33■□□□□ 0.52
ITGB1-215ENST00000488494 CD6P30203 668 aa18.33■□□□□ 0.52
ITGB1-215ENST00000488494 STAT1P42224 750 aa18.33■□□□□ 0.52
ITGB1-215ENST00000488494 TPMTP51580 245 aa18.33■□□□□ 0.52
ITGB1-215ENST00000488494 IRAK1P51617 712 aa18.33■□□□□ 0.52
ITGB1-215ENST00000488494 FMO1Q01740 532 aa18.33■□□□□ 0.52
ITGB1-215ENST00000488494 ZNF33AQ06730 810 aa18.33■□□□□ 0.52
ITGB1-215ENST00000488494 TRIM61Q5EBN2 209 aa18.33■□□□□ 0.52
ITGB1-215ENST00000488494 IL31Q6EBC2 164 aa18.33■□□□□ 0.52
ITGB1-215ENST00000488494 METTL3Q86U44 580 aaKnown RBP18.33■□□□□ 0.52
ITGB1-215ENST00000488494 SLC41A1Q8IVJ1 513 aa18.33■□□□□ 0.52
ITGB1-215ENST00000488494 CCAR2Q8N163 923 aaKnown RBP18.33■□□□□ 0.52
ITGB1-215ENST00000488494 TTC17Q96AE7 1141 aa18.33■□□□□ 0.52
ITGB1-215ENST00000488494 TOE1Q96GM8 510 aaKnown RBP18.33■□□□□ 0.52
ITGB1-215ENST00000488494 RPRD1AQ96P16 312 aaPredicted RBP18.33■□□□□ 0.52
ITGB1-215ENST00000488494 ERGIC2Q96RQ1 377 aa18.33■□□□□ 0.52
ITGB1-215ENST00000488494 TBCBQ99426 244 aa18.33■□□□□ 0.52
ITGB1-215ENST00000488494 RRN3Q9NYV6 651 aa18.33■□□□□ 0.52
ITGB1-215ENST00000488494 PILRBQ9UKJ0 227 aa18.33■□□□□ 0.52
ITGB1-215ENST00000488494 VANGL2Q9ULK5 521 aa18.33■□□□□ 0.52
ITGB1-215ENST00000488494 HS3ST4Q9Y661 456 aa18.33■□□□□ 0.52
ITGB1-215ENST00000488494 NCOR2Q9Y618 2525 aa18.33■□□□□ 0.52
ITGB1-215ENST00000488494 A0A1B0GVM2 712 aa18.32■□□□□ 0.52
ITGB1-215ENST00000488494 TCAF2A6NFQ2 919 aa18.32■□□□□ 0.52
ITGB1-215ENST00000488494 PAGE1O75459 146 aa18.32■□□□□ 0.52
ITGB1-215ENST00000488494 CFIP05156 583 aa18.32■□□□□ 0.52
ITGB1-215ENST00000488494 ACADMP11310 421 aa18.32■□□□□ 0.52
ITGB1-215ENST00000488494 CHRNB2P17787 502 aa18.32■□□□□ 0.52
ITGB1-215ENST00000488494 KCNA4P22459 653 aa18.32■□□□□ 0.52
ITGB1-215ENST00000488494 FLT3P36888 993 aa18.32■□□□□ 0.52
ITGB1-215ENST00000488494 DPP6P42658 865 aa18.32■□□□□ 0.52
ITGB1-215ENST00000488494 CTSOP43234 321 aaPredicted RBP18.32■□□□□ 0.52
ITGB1-215ENST00000488494 NUMBP49757 651 aa18.32■□□□□ 0.52
ITGB1-215ENST00000488494 ST8SIA6P61647 398 aa18.32■□□□□ 0.52
ITGB1-215ENST00000488494 AUHQ13825 339 aaKnown RBP18.32■□□□□ 0.52
ITGB1-215ENST00000488494 PLEKHG6Q3KR16 790 aa18.32■□□□□ 0.52
ITGB1-215ENST00000488494 PEAR1Q5VY43 1037 aaPredicted RBP18.32■□□□□ 0.52
ITGB1-215ENST00000488494 TRNP1Q6NT89 227 aa18.32■□□□□ 0.52
ITGB1-215ENST00000488494 FBXL22Q6P050 247 aa18.32■□□□□ 0.52
ITGB1-215ENST00000488494 IGSF8Q969P0 613 aa18.32■□□□□ 0.52
ITGB1-215ENST00000488494 MYO19Q96H55 970 aa18.32■□□□□ 0.52
ITGB1-215ENST00000488494 MRGPRX3Q96LB0 322 aa18.32■□□□□ 0.52
ITGB1-215ENST00000488494 BPIFA3Q9BQP9 254 aa18.32■□□□□ 0.52
ITGB1-215ENST00000488494 MTG2Q9H4K7 406 aa18.32■□□□□ 0.52
ITGB1-215ENST00000488494 PRSS16Q9NQE7 514 aa18.32■□□□□ 0.52
ITGB1-215ENST00000488494 METTL5Q9NRN9 209 aaKnown RBP18.32■□□□□ 0.52
ITGB1-215ENST00000488494 KIAA1522Q9P206 1035 aaPredicted RBP18.32■□□□□ 0.52
ITGB1-215ENST00000488494 EVLQ9UI08 416 aaPredicted RBP18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms