RNA–Protein interactions for RNA: ENST00000488386.5

CDHR3-213, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 540 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-213ENST00000488386 WARSP23381 471 aaKnown RBP6.28□□□□□ -1.4
CDHR3-213ENST00000488386 CDC25CP30307 473 aa6.28□□□□□ -1.4
CDHR3-213ENST00000488386 GNL1P36915 607 aaPredicted RBP6.28□□□□□ -1.4
CDHR3-213ENST00000488386 GALK1P51570 392 aa6.28□□□□□ -1.4
CDHR3-213ENST00000488386 KPNA1P52294 538 aaPredicted RBP6.28□□□□□ -1.4
CDHR3-213ENST00000488386 TNNC1P63316 161 aa6.28□□□□□ -1.4
CDHR3-213ENST00000488386 SATB1Q01826 763 aa6.28□□□□□ -1.4
CDHR3-213ENST00000488386 DMWDQ09019 674 aa6.28□□□□□ -1.4
CDHR3-213ENST00000488386 TRPC3Q13507 836 aa6.28□□□□□ -1.4
CDHR3-213ENST00000488386 SURF1Q15526 300 aa6.28□□□□□ -1.4
CDHR3-213ENST00000488386 LPAL2Q16609 132 aa6.28□□□□□ -1.4
CDHR3-213ENST00000488386 NFE2Q16621 373 aaPredicted RBP6.28□□□□□ -1.4
CDHR3-213ENST00000488386 C1orf220Q5T0J3 134 aa6.28□□□□□ -1.4
CDHR3-213ENST00000488386 ATL3Q6DD88 541 aa6.28□□□□□ -1.4
CDHR3-213ENST00000488386 ISM2Q6H9L7 571 aa6.28□□□□□ -1.4
CDHR3-213ENST00000488386 PKN3Q6P5Z2 889 aa6.28□□□□□ -1.4
CDHR3-213ENST00000488386 FAM171BQ6P995 826 aa6.28□□□□□ -1.4
CDHR3-213ENST00000488386 ZNF852Q6ZMS4 543 aa6.28□□□□□ -1.4
CDHR3-213ENST00000488386 KRBA2Q6ZNG9 492 aa6.28□□□□□ -1.4
CDHR3-213ENST00000488386 LIMS2Q7Z4I7 341 aa6.28□□□□□ -1.4
CDHR3-213ENST00000488386 CMTM8Q8IZV2 173 aa6.28□□□□□ -1.4
CDHR3-213ENST00000488386 ADSSL1Q8N142 457 aa6.28□□□□□ -1.4
CDHR3-213ENST00000488386 TMEM86AQ8N2M4 240 aa6.28□□□□□ -1.4
CDHR3-213ENST00000488386 ARL14EPQ8N8R7 260 aaPredicted RBP6.28□□□□□ -1.4
CDHR3-213ENST00000488386 PDZD8Q8NEN9 1154 aa6.28□□□□□ -1.4
CDHR3-213ENST00000488386 BPIFB1Q8TDL5 484 aa6.28□□□□□ -1.4
CDHR3-213ENST00000488386 CSGALNACT1Q8TDX6 532 aa6.28□□□□□ -1.4
CDHR3-213ENST00000488386 C2orf15Q8WU43 125 aaKnown RBP6.28□□□□□ -1.4
CDHR3-213ENST00000488386 DEPDC1BQ8WUY9 529 aa6.28□□□□□ -1.4
CDHR3-213ENST00000488386 SREK1Q8WXA9 508 aaKnown RBP6.28□□□□□ -1.4
CDHR3-213ENST00000488386 DNASE1L2Q92874 299 aa6.28□□□□□ -1.4
CDHR3-213ENST00000488386 USP13Q92995 863 aaPredicted RBP6.28□□□□□ -1.4
CDHR3-213ENST00000488386 NKD2Q969F2 451 aaPredicted RBP6.28□□□□□ -1.4
CDHR3-213ENST00000488386 CHFRQ96EP1 664 aa6.28□□□□□ -1.4
CDHR3-213ENST00000488386 FCRL2Q96LA5 508 aaPredicted RBP6.28□□□□□ -1.4
CDHR3-213ENST00000488386 GCNAQ96QF7 691 aa6.28□□□□□ -1.4
CDHR3-213ENST00000488386 XYLT2Q9H1B5 865 aa6.28□□□□□ -1.4
CDHR3-213ENST00000488386 SNX25Q9H3E2 840 aa6.28□□□□□ -1.4
CDHR3-213ENST00000488386 HPS4Q9NQG7 708 aa6.28□□□□□ -1.4
CDHR3-213ENST00000488386 MAGEC2Q9UBF1 373 aaPredicted RBP6.28□□□□□ -1.4
CDHR3-213ENST00000488386 ZMYM5Q9UJ78 669 aa6.28□□□□□ -1.4
CDHR3-213ENST00000488386 CDH9Q9ULB4 789 aa6.28□□□□□ -1.4
CDHR3-213ENST00000488386 EMC9Q9Y3B6 208 aa6.28□□□□□ -1.4
CDHR3-213ENST00000488386 ASB3Q9Y575 518 aa6.28□□□□□ -1.4
CDHR3-213ENST00000488386 FANCMQ8IYD8 2048 aa6.28□□□□□ -1.4
CDHR3-213ENST00000488386 MYO16Q9Y6X6 1858 aa6.28□□□□□ -1.4
CDHR3-213ENST00000488386 MYH10P35580 1976 aa6.27□□□□□ -1.4
CDHR3-213ENST00000488386 HELZP42694 1942 aaKnown RBP6.27□□□□□ -1.41
CDHR3-213ENST00000488386 TRIM49BA6NDI0 452 aa6.27□□□□□ -1.41
CDHR3-213ENST00000488386 F8VP50 259 aa6.27□□□□□ -1.41
CDHR3-213ENST00000488386 SPECC1L-ADORA2AF8WAN1 911 aa6.27□□□□□ -1.41
CDHR3-213ENST00000488386 CHADO15335 359 aa6.27□□□□□ -1.41
CDHR3-213ENST00000488386 LAMTOR5O43504 91 aa6.27□□□□□ -1.41
CDHR3-213ENST00000488386 AKAP3O75969 853 aa6.27□□□□□ -1.41
CDHR3-213ENST00000488386 BEST1O76090 585 aa6.27□□□□□ -1.41
CDHR3-213ENST00000488386 NOL4O94818 638 aa6.27□□□□□ -1.41
CDHR3-213ENST00000488386 KCNH1O95259 989 aa6.27□□□□□ -1.41
CDHR3-213ENST00000488386 CSH1P0DML2 217 aa6.27□□□□□ -1.41
CDHR3-213ENST00000488386 CSH2P0DML3 217 aa6.27□□□□□ -1.41
CDHR3-213ENST00000488386 CHRNB1P11230 501 aa6.27□□□□□ -1.41
CDHR3-213ENST00000488386 CCDC130P13994 396 aa6.27□□□□□ -1.41
CDHR3-213ENST00000488386 PTPN1P18031 435 aaKnown RBP6.27□□□□□ -1.41
CDHR3-213ENST00000488386 PAX3P23760 479 aa6.27□□□□□ -1.41
CDHR3-213ENST00000488386 PCSK1P29120 753 aa6.27□□□□□ -1.41
CDHR3-213ENST00000488386 AVPR1AP37288 418 aa6.27□□□□□ -1.41
CDHR3-213ENST00000488386 GCLMP48507 274 aa6.27□□□□□ -1.41
CDHR3-213ENST00000488386 LHX1P48742 406 aa6.27□□□□□ -1.41
CDHR3-213ENST00000488386 ZNF143P52747 638 aaPredicted RBP6.27□□□□□ -1.41
CDHR3-213ENST00000488386 ZXDBP98169 803 aa6.27□□□□□ -1.41
CDHR3-213ENST00000488386 CYP4F3Q08477 520 aa6.27□□□□□ -1.41
CDHR3-213ENST00000488386 FCHO2Q0JRZ9 810 aa6.27□□□□□ -1.41
CDHR3-213ENST00000488386 SRSF5Q13243 272 aaKnown RBP6.27□□□□□ -1.41
CDHR3-213ENST00000488386 KIR3DS1Q14943 382 aa6.27□□□□□ -1.41
CDHR3-213ENST00000488386 ZNF699Q32M78 642 aa6.27□□□□□ -1.41
CDHR3-213ENST00000488386 DPH6Q7L8W6 267 aa6.27□□□□□ -1.41
CDHR3-213ENST00000488386 ACOT1Q86TX2 421 aa6.27□□□□□ -1.41
CDHR3-213ENST00000488386 ZNF227Q86WZ6 799 aa6.27□□□□□ -1.41
CDHR3-213ENST00000488386 C12orf56Q8IXR9 622 aa6.27□□□□□ -1.41
CDHR3-213ENST00000488386 ANKS4BQ8N8V4 417 aa6.27□□□□□ -1.41
CDHR3-213ENST00000488386 BVESQ8NE79 360 aa6.27□□□□□ -1.41
CDHR3-213ENST00000488386 PARD3BQ8TEW8 1205 aa6.27□□□□□ -1.41
CDHR3-213ENST00000488386 FAM168AQ92567 244 aa6.27□□□□□ -1.41
CDHR3-213ENST00000488386 MRPS31Q92665 395 aaKnown RBP6.27□□□□□ -1.41
CDHR3-213ENST00000488386 PPP1R14AQ96A00 147 aa6.27□□□□□ -1.41
CDHR3-213ENST00000488386 JAKMIP2Q96AA8 810 aa6.27□□□□□ -1.41
CDHR3-213ENST00000488386 KIRREL1Q96J84 757 aa6.27□□□□□ -1.41
CDHR3-213ENST00000488386 MRGPRX3Q96LB0 322 aa6.27□□□□□ -1.41
CDHR3-213ENST00000488386 TWNKQ96RR1 684 aa6.27□□□□□ -1.41
CDHR3-213ENST00000488386 KCNK16Q96T55 309 aa6.27□□□□□ -1.41
CDHR3-213ENST00000488386 MED10Q9BTT4 135 aa6.27□□□□□ -1.41
CDHR3-213ENST00000488386 B3GNT5Q9BYG0 378 aa6.27□□□□□ -1.41
CDHR3-213ENST00000488386 TRIM55Q9BYV6 548 aa6.27□□□□□ -1.41
CDHR3-213ENST00000488386 GPR88Q9GZN0 384 aa6.27□□□□□ -1.41
CDHR3-213ENST00000488386 RNF32Q9H0A6 362 aa6.27□□□□□ -1.41
CDHR3-213ENST00000488386 TRPV4Q9HBA0 871 aa6.27□□□□□ -1.41
CDHR3-213ENST00000488386 APOBEC3GQ9HC16 384 aaKnown RBP6.27□□□□□ -1.41
CDHR3-213ENST00000488386 KIAA1586Q9HCI6 787 aa6.27□□□□□ -1.41
CDHR3-213ENST00000488386 GKN1Q9NS71 199 aa6.27□□□□□ -1.41
CDHR3-213ENST00000488386 FAM49BQ9NUQ9 324 aa6.27□□□□□ -1.41
CDHR3-213ENST00000488386 DMAC2Q9NW81 257 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms