RNA–Protein interactions for RNA: ENST00000488149.5

MCF2L2-212, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 2

Gene MCF2L2, Length 7,813 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-212ENST00000488149 BNIP1Q12981 228 aa8.43□□□□□ -1.06
MCF2L2-212ENST00000488149 GPR107Q5VW38 600 aa8.43□□□□□ -1.06
MCF2L2-212ENST00000488149 SCARA3Q6AZY7 606 aa8.43□□□□□ -1.06
MCF2L2-212ENST00000488149 CDC42EP5Q6NZY7 148 aa8.43□□□□□ -1.06
MCF2L2-212ENST00000488149 FASTKD5Q7L8L6 764 aaKnown RBP8.43□□□□□ -1.06
MCF2L2-212ENST00000488149 APOBEC3FQ8IUX4 373 aaKnown RBP8.43□□□□□ -1.06
MCF2L2-212ENST00000488149 HS6ST3Q8IZP7 471 aa8.43□□□□□ -1.06
MCF2L2-212ENST00000488149 TTC30BQ8N4P2 665 aa8.43□□□□□ -1.06
MCF2L2-212ENST00000488149 RBM46Q8TBY0 533 aaKnown RBP8.43□□□□□ -1.06
MCF2L2-212ENST00000488149 TMEM176AQ96HP8 235 aa8.43□□□□□ -1.06
MCF2L2-212ENST00000488149 MID1IP1Q9NPA3 183 aa8.43□□□□□ -1.06
MCF2L2-212ENST00000488149 C3orf18Q9UK00 162 aa8.43□□□□□ -1.06
MCF2L2-212ENST00000488149 CEP152O94986 1710 aa8.43□□□□□ -1.06
MCF2L2-212ENST00000488149 FRMPD1Q5SYB0 1578 aa8.43□□□□□ -1.06
MCF2L2-212ENST00000488149 ERI2A8K979 691 aaKnown RBP8.43□□□□□ -1.06
MCF2L2-212ENST00000488149 HMBSP08397 361 aa8.43□□□□□ -1.06
MCF2L2-212ENST00000488149 GSTM1P09488 218 aa8.43□□□□□ -1.06
MCF2L2-212ENST00000488149 DLG4P78352 724 aa8.43□□□□□ -1.06
MCF2L2-212ENST00000488149 MTMR2Q13614 643 aa8.43□□□□□ -1.06
MCF2L2-212ENST00000488149 DDX39BQ13838 428 aaKnown RBP8.43□□□□□ -1.06
MCF2L2-212ENST00000488149 EARS2Q5JPH6 523 aaKnown RBP8.43□□□□□ -1.06
MCF2L2-212ENST00000488149 STRIP1Q5VSL9 837 aa8.43□□□□□ -1.06
MCF2L2-212ENST00000488149 KIAA0408Q6ZU52 694 aa8.43□□□□□ -1.06
MCF2L2-212ENST00000488149 NEK10Q6ZWH5 1172 aa8.43□□□□□ -1.06
MCF2L2-212ENST00000488149 AADATQ8N5Z0 425 aa8.43□□□□□ -1.06
MCF2L2-212ENST00000488149 DPP10Q8N608 796 aa8.43□□□□□ -1.06
MCF2L2-212ENST00000488149 PCDH20Q8N6Y1 951 aaKnown RBP8.43□□□□□ -1.06
MCF2L2-212ENST00000488149 KBTBD8Q8NFY9 601 aa8.43□□□□□ -1.06
MCF2L2-212ENST00000488149 KAZALD1Q96I82 304 aa8.43□□□□□ -1.06
MCF2L2-212ENST00000488149 PNMA5Q96PV4 448 aa8.43□□□□□ -1.06
MCF2L2-212ENST00000488149 FICDQ9BVA6 458 aa8.43□□□□□ -1.06
MCF2L2-212ENST00000488149 HACD1B0YJ81 288 aa8.43□□□□□ -1.06
MCF2L2-212ENST00000488149 INO80DQ53TQ3 878 aaPredicted RBP8.43□□□□□ -1.06
MCF2L2-212ENST00000488149 C11orf74Q86VG3 221 aa8.43□□□□□ -1.06
MCF2L2-212ENST00000488149 TTC30AQ86WT1 665 aa8.43□□□□□ -1.06
MCF2L2-212ENST00000488149 PQLC1Q8N2U9 271 aa8.43□□□□□ -1.06
MCF2L2-212ENST00000488149 FBXO39Q8N4B4 442 aa8.43□□□□□ -1.06
MCF2L2-212ENST00000488149 ATP6V0D2Q8N8Y2 350 aa8.43□□□□□ -1.06
MCF2L2-212ENST00000488149 TBC1D16Q8TBP0 767 aa8.43□□□□□ -1.06
MCF2L2-212ENST00000488149 SPPL2AQ8TCT8 520 aa8.43□□□□□ -1.06
MCF2L2-212ENST00000488149 ELOVL6Q9H5J4 265 aa8.43□□□□□ -1.06
MCF2L2-212ENST00000488149 TRIM39Q9HCM9 518 aa8.43□□□□□ -1.06
MCF2L2-212ENST00000488149 LSM7Q9UK45 103 aaKnown RBP8.43□□□□□ -1.06
MCF2L2-212ENST00000488149 SF3B1O75533 1304 aaKnown RBP eCLIP8.43□□□□□ -1.064e-7■■■■■ 133.7
MCF2L2-212ENST00000488149 LOC100506127A0A0U1RQW1 187 aa8.43□□□□□ -1.06
MCF2L2-212ENST00000488149 CCDC182A6NF36 153 aa8.43□□□□□ -1.06
MCF2L2-212ENST00000488149 MYL12BO14950 172 aa8.43□□□□□ -1.06
MCF2L2-212ENST00000488149 AREL1O15033 823 aa8.43□□□□□ -1.06
MCF2L2-212ENST00000488149 CPSF4O95639 269 aaKnown RBP8.43□□□□□ -1.06
MCF2L2-212ENST00000488149 SLC2A4P14672 509 aa8.43□□□□□ -1.06
MCF2L2-212ENST00000488149 PSME3P61289 254 aa8.43□□□□□ -1.06
MCF2L2-212ENST00000488149 FCHO2Q0JRZ9 810 aa8.43□□□□□ -1.06
MCF2L2-212ENST00000488149 VPS72Q15906 364 aa8.43□□□□□ -1.06
MCF2L2-212ENST00000488149 KHDRBS2Q5VWX1 349 aaKnown RBP8.43□□□□□ -1.06
MCF2L2-212ENST00000488149 MFSD5Q6N075 450 aa8.43□□□□□ -1.06
MCF2L2-212ENST00000488149 CLPBQ9H078 707 aa8.43□□□□□ -1.06
MCF2L2-212ENST00000488149 RIOX1Q9H6W3 641 aa8.43□□□□□ -1.06
MCF2L2-212ENST00000488149 ZSCAN32Q9NX65 697 aa8.43□□□□□ -1.06
MCF2L2-212ENST00000488149 MRPL39Q9NYK5 338 aaKnown RBP8.43□□□□□ -1.06
MCF2L2-212ENST00000488149 ASTN2O75129 1339 aaPredicted RBP8.42□□□□□ -1.06
MCF2L2-212ENST00000488149 C21orf2O43822 256 aa8.42□□□□□ -1.06
MCF2L2-212ENST00000488149 ASMTLO95671 621 aa8.42□□□□□ -1.06
MCF2L2-212ENST00000488149 SNRPB2P08579 225 aaKnown RBP8.42□□□□□ -1.06
MCF2L2-212ENST00000488149 RPS7P62081 194 aaKnown RBP8.42□□□□□ -1.06
MCF2L2-212ENST00000488149 ARHGEF6Q15052 776 aa8.42□□□□□ -1.06
MCF2L2-212ENST00000488149 USP39Q53GS9 565 aaKnown RBP8.42□□□□□ -1.06
MCF2L2-212ENST00000488149 MIIPQ5JXC2 388 aa8.42□□□□□ -1.06
MCF2L2-212ENST00000488149 NOTUMQ6P988 496 aa8.42□□□□□ -1.06
MCF2L2-212ENST00000488149 ATG14Q6ZNE5 492 aa8.42□□□□□ -1.06
MCF2L2-212ENST00000488149 ACOT1Q86TX2 421 aa8.42□□□□□ -1.06
MCF2L2-212ENST00000488149 FAM131BQ86XD5 332 aa8.42□□□□□ -1.06
MCF2L2-212ENST00000488149 PSMA8Q8TAA3 256 aa8.42□□□□□ -1.06
MCF2L2-212ENST00000488149 CAMKK2Q96RR4 588 aa8.42□□□□□ -1.06
MCF2L2-212ENST00000488149 C8orf4Q9NR00 106 aa8.42□□□□□ -1.06
MCF2L2-212ENST00000488149 ERAP1Q9NZ08 941 aa8.42□□□□□ -1.06
MCF2L2-212ENST00000488149 UBQLN1Q9UMX0 589 aaKnown RBP8.42□□□□□ -1.06
MCF2L2-212ENST00000488149 TPP1O14773 563 aa8.42□□□□□ -1.06
MCF2L2-212ENST00000488149 MGRN1O60291 552 aa8.42□□□□□ -1.06
MCF2L2-212ENST00000488149 SYNCRIPO60506 623 aaKnown RBP8.42□□□□□ -1.06
MCF2L2-212ENST00000488149 GJA8P48165 433 aa8.42□□□□□ -1.06
MCF2L2-212ENST00000488149 GALK1P51570 392 aa8.42□□□□□ -1.06
MCF2L2-212ENST00000488149 TRAP1Q12931 704 aaKnown RBP8.42□□□□□ -1.06
MCF2L2-212ENST00000488149 SQLEQ14534 574 aa8.42□□□□□ -1.06
MCF2L2-212ENST00000488149 ANKS6Q68DC2 871 aa8.42□□□□□ -1.06
MCF2L2-212ENST00000488149 TRHDEQ9UKU6 1024 aa8.42□□□□□ -1.06
MCF2L2-212ENST00000488149 KIAA1210Q9ULL0 1709 aa8.42□□□□□ -1.06
MCF2L2-212ENST00000488149 CSPG5O95196 566 aa8.42□□□□□ -1.06
MCF2L2-212ENST00000488149 CDC16Q13042 620 aa8.42□□□□□ -1.06
MCF2L2-212ENST00000488149 NECAB2Q7Z6G3 386 aa8.42□□□□□ -1.06
MCF2L2-212ENST00000488149 AKAP14Q86UN6 197 aa8.42□□□□□ -1.06
MCF2L2-212ENST00000488149 TRABD2AQ86V40 505 aa8.42□□□□□ -1.06
MCF2L2-212ENST00000488149 TMEM132CQ8N3T6 1108 aa8.42□□□□□ -1.06
MCF2L2-212ENST00000488149 TEKT5Q96M29 485 aa8.42□□□□□ -1.06
MCF2L2-212ENST00000488149 GSTK1Q9Y2Q3 226 aa8.42□□□□□ -1.06
MCF2L2-212ENST00000488149 MAP2P11137 1827 aaKnown RBP8.42□□□□□ -1.06
MCF2L2-212ENST00000488149 A0A087X1B8 175 aa8.42□□□□□ -1.06
MCF2L2-212ENST00000488149 A0A0B4J269 797 aa8.42□□□□□ -1.06
MCF2L2-212ENST00000488149 FBXO21O94952 628 aa8.42□□□□□ -1.06
MCF2L2-212ENST00000488149 CYP1A1P04798 512 aaPredicted RBP8.42□□□□□ -1.06
MCF2L2-212ENST00000488149 FESP07332 822 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms