RNA–Protein interactions for RNA: ENST00000488058.1

RNF38-208, Transcript of ring finger protein 38, humanhuman

TSL 3

Gene RNF38, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-208ENST00000488058 DLDP09622 509 aaKnown RBP24.52■■□□□ 1.52
RNF38-208ENST00000488058 TFE3P19532 575 aaPredicted RBP24.52■■□□□ 1.52
RNF38-208ENST00000488058 SCNN1AP37088 669 aa24.52■■□□□ 1.52
RNF38-208ENST00000488058 GGCXP38435 758 aa24.52■■□□□ 1.52
RNF38-208ENST00000488058 DEUP1Q05D60 604 aa24.52■■□□□ 1.52
RNF38-208ENST00000488058 KLHL40Q2TBA0 621 aa24.52■■□□□ 1.52
RNF38-208ENST00000488058 FSCBQ5H9T9 825 aa24.52■■□□□ 1.52
RNF38-208ENST00000488058 RABGAP1LQ5R372 815 aa24.52■■□□□ 1.52
RNF38-208ENST00000488058 OTUD1Q5VV17 481 aaPredicted RBP24.52■■□□□ 1.52
RNF38-208ENST00000488058 TCEAL6Q6IPX3 200 aa24.52■■□□□ 1.52
RNF38-208ENST00000488058 SND1Q7KZF4 910 aaKnown RBP eCLIP24.52■■□□□ 1.52
RNF38-208ENST00000488058 PHLDB2Q86SQ0 1253 aa24.52■■□□□ 1.52
RNF38-208ENST00000488058 TCEAL3Q969E4 200 aa24.52■■□□□ 1.52
RNF38-208ENST00000488058 TBCBQ99426 244 aa24.52■■□□□ 1.52
RNF38-208ENST00000488058 C11orf70Q9BRQ4 267 aa24.52■■□□□ 1.52
RNF38-208ENST00000488058 MKRN2Q9H000 416 aaKnown RBP24.52■■□□□ 1.52
RNF38-208ENST00000488058 PIGVQ9NUD9 493 aa24.52■■□□□ 1.52
RNF38-208ENST00000488058 AP5Z1O43299 807 aa24.51■■□□□ 1.51
RNF38-208ENST00000488058 CYP1A1P04798 512 aaPredicted RBP24.51■■□□□ 1.51
RNF38-208ENST00000488058 SDHBP21912 280 aa24.51■■□□□ 1.51
RNF38-208ENST00000488058 CSKP41240 450 aa24.51■■□□□ 1.51
RNF38-208ENST00000488058 PTGER3P43115 390 aa24.51■■□□□ 1.51
RNF38-208ENST00000488058 NUMBP49757 651 aa24.51■■□□□ 1.51
RNF38-208ENST00000488058 PTPRNQ16849 979 aa24.51■■□□□ 1.51
RNF38-208ENST00000488058 FILIP1LQ4L180 1135 aa24.51■■□□□ 1.51
RNF38-208ENST00000488058 TMPRSS6Q8IU80 811 aa24.51■■□□□ 1.51
RNF38-208ENST00000488058 SLC30A5Q8TAD4 765 aa24.51■■□□□ 1.51
RNF38-208ENST00000488058 NETO1Q8TDF5 533 aa24.51■■□□□ 1.51
RNF38-208ENST00000488058 PRCCQ92733 491 aaPredicted RBP24.51■■□□□ 1.51
RNF38-208ENST00000488058 SIPA1Q96FS4 1042 aa24.51■■□□□ 1.51
RNF38-208ENST00000488058 LMLNQ96KR4 655 aa24.51■■□□□ 1.51
RNF38-208ENST00000488058 RPRD1AQ96P16 312 aaPredicted RBP24.51■■□□□ 1.51
RNF38-208ENST00000488058 PRMT1Q99873 361 aaKnown RBP24.51■■□□□ 1.51
RNF38-208ENST00000488058 ADAM33Q9BZ11 813 aa24.51■■□□□ 1.51
RNF38-208ENST00000488058 SIK2Q9H0K1 926 aa24.51■■□□□ 1.51
RNF38-208ENST00000488058 WDCPQ9H6R7 721 aa24.51■■□□□ 1.51
RNF38-208ENST00000488058 METTL5Q9NRN9 209 aaKnown RBP24.51■■□□□ 1.51
RNF38-208ENST00000488058 DLL3Q9NYJ7 618 aa24.51■■□□□ 1.51
RNF38-208ENST00000488058 KIAA1522Q9P206 1035 aaPredicted RBP24.51■■□□□ 1.51
RNF38-208ENST00000488058 VANGL2Q9ULK5 521 aa24.51■■□□□ 1.51
RNF38-208ENST00000488058 FRYLO94915 3013 aa24.51■■□□□ 1.51
RNF38-208ENST00000488058 NDUFS2O75306 463 aa24.5■■□□□ 1.51
RNF38-208ENST00000488058 PAGE1O75459 146 aa24.5■■□□□ 1.51
RNF38-208ENST00000488058 MOCS3O95396 460 aa24.5■■□□□ 1.51
RNF38-208ENST00000488058 FLT3P36888 993 aa24.5■■□□□ 1.51
RNF38-208ENST00000488058 ST8SIA6P61647 398 aa24.5■■□□□ 1.51
RNF38-208ENST00000488058 CENPCQ03188 943 aa24.5■■□□□ 1.51
RNF38-208ENST00000488058 PITRM1Q5JRX3 1037 aa24.5■■□□□ 1.51
RNF38-208ENST00000488058 LYSMD4Q5XG99 296 aa24.5■■□□□ 1.51
RNF38-208ENST00000488058 FBXL22Q6P050 247 aa24.5■■□□□ 1.51
RNF38-208ENST00000488058 TRIM72Q6ZMU5 477 aa24.5■■□□□ 1.51
RNF38-208ENST00000488058 DGLUCYQ7Z3D6 616 aa24.5■■□□□ 1.51
RNF38-208ENST00000488058 CCAR2Q8N163 923 aaKnown RBP24.5■■□□□ 1.51
RNF38-208ENST00000488058 FUCA2Q9BTY2 467 aa24.5■■□□□ 1.51
RNF38-208ENST00000488058 TKTL2Q9H0I9 626 aa24.5■■□□□ 1.51
RNF38-208ENST00000488058 TMEM245Q9H330 911 aa24.5■■□□□ 1.51
RNF38-208ENST00000488058 INTS6Q9UL03 887 aaKnown RBP24.5■■□□□ 1.51
RNF38-208ENST00000488058 HS3ST4Q9Y661 456 aa24.5■■□□□ 1.51
RNF38-208ENST00000488058 ATXN2Q99700 1313 aaKnown RBP24.5■■□□□ 1.51
RNF38-208ENST00000488058 TNRC6BQ9UPQ9 1833 aaKnown RBP24.49■■□□□ 1.51
RNF38-208ENST00000488058 ACADMP11310 421 aa24.49■■□□□ 1.51
RNF38-208ENST00000488058 COPAP53621 1224 aa24.49■■□□□ 1.51
RNF38-208ENST00000488058 MTA1Q13330 715 aa24.49■■□□□ 1.51
RNF38-208ENST00000488058 AUHQ13825 339 aaKnown RBP24.49■■□□□ 1.51
RNF38-208ENST00000488058 SLC25A52Q3SY17 297 aa24.49■■□□□ 1.51
RNF38-208ENST00000488058 TTC39BQ5VTQ0 682 aaPredicted RBP24.49■■□□□ 1.51
RNF38-208ENST00000488058 OR2T3Q8NH03 318 aa24.49■■□□□ 1.51
RNF38-208ENST00000488058 IGSF8Q969P0 613 aa24.49■■□□□ 1.51
RNF38-208ENST00000488058 TTC17Q96AE7 1141 aa24.49■■□□□ 1.51
RNF38-208ENST00000488058 CFAP57Q96MR6 1250 aa24.49■■□□□ 1.51
RNF38-208ENST00000488058 PCDHB18PQ96TA0 734 aa24.49■■□□□ 1.51
RNF38-208ENST00000488058 RTN4Q9NQC3 1192 aaKnown RBP24.49■■□□□ 1.51
RNF38-208ENST00000488058 RXFP3Q9NSD7 469 aa24.49■■□□□ 1.51
RNF38-208ENST00000488058 A0A1B0GVM2 712 aa24.48■■□□□ 1.51
RNF38-208ENST00000488058 TCAF2A6NFQ2 919 aa24.48■■□□□ 1.51
RNF38-208ENST00000488058 ADCY5O95622 1261 aa24.48■■□□□ 1.51
RNF38-208ENST00000488058 F9P00740 461 aa24.48■■□□□ 1.51
RNF38-208ENST00000488058 ASLP04424 464 aa24.48■■□□□ 1.51
RNF38-208ENST00000488058 PDGFRAP16234 1089 aa24.48■■□□□ 1.51
RNF38-208ENST00000488058 MMP8P22894 467 aa24.48■■□□□ 1.51
RNF38-208ENST00000488058 NSFP46459 744 aaKnown RBP24.48■■□□□ 1.51
RNF38-208ENST00000488058 CXCR3P49682 368 aa24.48■■□□□ 1.51
RNF38-208ENST00000488058 ATXN1P54253 815 aaKnown RBP24.48■■□□□ 1.51
RNF38-208ENST00000488058 CAMK2GQ13555 558 aaPredicted RBP24.48■■□□□ 1.51
RNF38-208ENST00000488058 BRMS1LQ5PSV4 323 aa24.48■■□□□ 1.51
RNF38-208ENST00000488058 TRNP1Q6NT89 227 aa24.48■■□□□ 1.51
RNF38-208ENST00000488058 APCDD1Q8J025 514 aa24.48■■□□□ 1.51
RNF38-208ENST00000488058 EMC1Q8N766 993 aa24.48■■□□□ 1.51
RNF38-208ENST00000488058 MTG2Q9H4K7 406 aa24.48■■□□□ 1.51
RNF38-208ENST00000488058 TMEM59LQ9UK28 342 aa24.48■■□□□ 1.51
RNF38-208ENST00000488058 PAXBP1Q9Y5B6 917 aa24.48■■□□□ 1.51
RNF38-208ENST00000488058 PATE3B3GLJ2 98 aa24.47■■□□□ 1.51
RNF38-208ENST00000488058 CTSOP43234 321 aaPredicted RBP24.47■■□□□ 1.51
RNF38-208ENST00000488058 IRAK1P51617 712 aa24.47■■□□□ 1.51
RNF38-208ENST00000488058 ZNF33AQ06730 810 aa24.47■■□□□ 1.51
RNF38-208ENST00000488058 IQCB1Q15051 598 aa24.47■■□□□ 1.51
RNF38-208ENST00000488058 RNF219Q5W0B1 726 aaPredicted RBP24.47■■□□□ 1.51
RNF38-208ENST00000488058 C14orf80Q86SX3 495 aa24.47■■□□□ 1.51
RNF38-208ENST00000488058 NT5C3BQ969T7 300 aa24.47■■□□□ 1.51
RNF38-208ENST00000488058 PGAP3Q96FM1 320 aaPredicted RBP24.47■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms