RNA–Protein interactions for RNA: ENST00000487825.5

BRCA1-217, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-217ENST00000487825 CNPY2Q9Y2B0 182 aa5.44□□□□□ -1.54
BRCA1-217ENST00000487825 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.44□□□□□ -1.54
BRCA1-217ENST00000487825 WNT6Q9Y6F9 365 aa5.44□□□□□ -1.54
BRCA1-217ENST00000487825 GRIN2DO15399 1336 aa5.44□□□□□ -1.54
BRCA1-217ENST00000487825 LCTP09848 1927 aa5.43□□□□□ -1.54
BRCA1-217ENST00000487825 LOC730098B7Z3J9 87 aa5.43□□□□□ -1.54
BRCA1-217ENST00000487825 PPM1DO15297 605 aa5.43□□□□□ -1.54
BRCA1-217ENST00000487825 SOAT2O75908 522 aa5.43□□□□□ -1.54
BRCA1-217ENST00000487825 PF4V1P10720 104 aa5.43□□□□□ -1.54
BRCA1-217ENST00000487825 CDK4P11802 303 aa5.43□□□□□ -1.54
BRCA1-217ENST00000487825 HDCP19113 662 aa5.43□□□□□ -1.54
BRCA1-217ENST00000487825 CCT8P50990 548 aa5.43□□□□□ -1.54
BRCA1-217ENST00000487825 SRSF4Q08170 494 aaKnown RBP5.43□□□□□ -1.54
BRCA1-217ENST00000487825 ITGA7Q13683 1181 aa5.43□□□□□ -1.54
BRCA1-217ENST00000487825 PLS1Q14651 629 aa5.43□□□□□ -1.54
BRCA1-217ENST00000487825 TCEAL5Q5H9L2 206 aa5.43□□□□□ -1.54
BRCA1-217ENST00000487825 BEND3Q5T5X7 828 aa5.43□□□□□ -1.54
BRCA1-217ENST00000487825 FAM160B1Q5W0V3 765 aa5.43□□□□□ -1.54
BRCA1-217ENST00000487825 TMEM108Q6UXF1 575 aa5.43□□□□□ -1.54
BRCA1-217ENST00000487825 RPAINQ86UA6 219 aa5.43□□□□□ -1.54
BRCA1-217ENST00000487825 SRRM1Q8IYB3 904 aaKnown RBP5.43□□□□□ -1.54
BRCA1-217ENST00000487825 GRAMD1CQ8IYS0 662 aa5.43□□□□□ -1.54
BRCA1-217ENST00000487825 KIAA2013Q8IYS2 634 aa5.43□□□□□ -1.54
BRCA1-217ENST00000487825 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.43□□□□□ -1.54
BRCA1-217ENST00000487825 TSPYL6Q8N831 410 aa5.43□□□□□ -1.54
BRCA1-217ENST00000487825 KAZALD1Q96I82 304 aa5.43□□□□□ -1.54
BRCA1-217ENST00000487825 FAM167AQ96KS9 214 aa5.43□□□□□ -1.54
BRCA1-217ENST00000487825 SIL1Q9H173 461 aa5.43□□□□□ -1.54
BRCA1-217ENST00000487825 DHX36Q9H2U1 1008 aaKnown RBP5.43□□□□□ -1.54
BRCA1-217ENST00000487825 EHD3Q9NZN3 535 aa5.43□□□□□ -1.54
BRCA1-217ENST00000487825 ZHX1Q9UKY1 873 aaPredicted RBP5.43□□□□□ -1.54
BRCA1-217ENST00000487825 PDS5AQ29RF7 1337 aaKnown RBP5.43□□□□□ -1.54
BRCA1-217ENST00000487825 UNC79Q9P2D8 2635 aa5.43□□□□□ -1.54
BRCA1-217ENST00000487825 LOC400499M0QZD8 3231 aa5.42□□□□□ -1.54
BRCA1-217ENST00000487825 GCOM1H8Y6P7 765 aaPredicted RBP5.42□□□□□ -1.54
BRCA1-217ENST00000487825 NCK2O43639 380 aa5.42□□□□□ -1.54
BRCA1-217ENST00000487825 CABYRO75952 493 aa5.42□□□□□ -1.54
BRCA1-217ENST00000487825 GJB5O95377 273 aa5.42□□□□□ -1.54
BRCA1-217ENST00000487825 SNAI1O95863 264 aaPredicted RBP5.42□□□□□ -1.54
BRCA1-217ENST00000487825 PDGFBP01127 241 aaPredicted RBP5.42□□□□□ -1.54
BRCA1-217ENST00000487825 GH2P01242 217 aa5.42□□□□□ -1.54
BRCA1-217ENST00000487825 PGK2P07205 417 aa5.42□□□□□ -1.54
BRCA1-217ENST00000487825 ZNF134P52741 427 aa5.42□□□□□ -1.54
BRCA1-217ENST00000487825 WDR5P61964 334 aaKnown RBP5.42□□□□□ -1.54
BRCA1-217ENST00000487825 FOXF2Q12947 444 aa5.42□□□□□ -1.54
BRCA1-217ENST00000487825 COG2Q14746 738 aa5.42□□□□□ -1.54
BRCA1-217ENST00000487825 RABL6Q3YEC7 729 aaPredicted RBP5.42□□□□□ -1.54
BRCA1-217ENST00000487825 CXCL17Q6UXB2 119 aa5.42□□□□□ -1.54
BRCA1-217ENST00000487825 TMCO2Q7Z6W1 182 aaPredicted RBP5.42□□□□□ -1.54
BRCA1-217ENST00000487825 CCDC146Q8IYE0 955 aa5.42□□□□□ -1.54
BRCA1-217ENST00000487825 CELF5Q8N6W0 485 aaKnown RBP5.42□□□□□ -1.54
BRCA1-217ENST00000487825 TMEM105Q8N8V8 129 aa5.42□□□□□ -1.54
BRCA1-217ENST00000487825 KLHDC4Q8TBB5 520 aa5.42□□□□□ -1.54
BRCA1-217ENST00000487825 BRIX1Q8TDN6 353 aaKnown RBP5.42□□□□□ -1.54
BRCA1-217ENST00000487825 SLC35A4Q96G79 324 aa5.42□□□□□ -1.54
BRCA1-217ENST00000487825 RIPOR3Q96MK2 946 aa5.42□□□□□ -1.54
BRCA1-217ENST00000487825 SLC46A1Q96NT5 459 aa5.42□□□□□ -1.54
BRCA1-217ENST00000487825 MAP3K14Q99558 947 aa5.42□□□□□ -1.54
BRCA1-217ENST00000487825 C17orf80Q9BSJ5 609 aa5.42□□□□□ -1.54
BRCA1-217ENST00000487825 ARMT1Q9H993 441 aa5.42□□□□□ -1.54
BRCA1-217ENST00000487825 SERHLQ9NQF3 203 aa5.42□□□□□ -1.54
BRCA1-217ENST00000487825 HOXC10Q9NYD6 342 aa5.42□□□□□ -1.54
BRCA1-217ENST00000487825 PADI4Q9UM07 663 aa5.42□□□□□ -1.54
BRCA1-217ENST00000487825 PCDHA6Q9UN73 950 aa5.42□□□□□ -1.54
BRCA1-217ENST00000487825 NOP58Q9Y2X3 529 aaKnown RBP5.42□□□□□ -1.54
BRCA1-217ENST00000487825 NAV2Q8IVL1 2488 aa5.41□□□□□ -1.54
BRCA1-217ENST00000487825 NBEAQ8NFP9 2946 aa5.41□□□□□ -1.54
BRCA1-217ENST00000487825 MYH7BA7E2Y1 1941 aa5.41□□□□□ -1.54
BRCA1-217ENST00000487825 ANKRD62A6NC57 917 aa5.41□□□□□ -1.54
BRCA1-217ENST00000487825 TBX10O75333 385 aa5.41□□□□□ -1.54
BRCA1-217ENST00000487825 SLC25A27O95847 323 aa5.41□□□□□ -1.54
BRCA1-217ENST00000487825 ALDH2P05091 517 aa5.41□□□□□ -1.54
BRCA1-217ENST00000487825 CT47B1P0C2W7 299 aaPredicted RBP5.41□□□□□ -1.54
BRCA1-217ENST00000487825 IQCF3P0C7M6 154 aa5.41□□□□□ -1.54
BRCA1-217ENST00000487825 PIM1P11309 404 aaPredicted RBP5.41□□□□□ -1.54
BRCA1-217ENST00000487825 CYP2C9P11712 490 aa5.41□□□□□ -1.54
BRCA1-217ENST00000487825 AKAP5P24588 427 aa5.41□□□□□ -1.54
BRCA1-217ENST00000487825 ICAM3P32942 547 aa5.41□□□□□ -1.54
BRCA1-217ENST00000487825 KCNJ5P48544 419 aa5.41□□□□□ -1.54
BRCA1-217ENST00000487825 NKX6-1P78426 367 aaPredicted RBP5.41□□□□□ -1.54
BRCA1-217ENST00000487825 DEFB103AP81534 67 aa5.41□□□□□ -1.54
BRCA1-217ENST00000487825 BEX3Q00994 111 aa5.41□□□□□ -1.54
BRCA1-217ENST00000487825 MECOMQ03112 1051 aa5.41□□□□□ -1.54
BRCA1-217ENST00000487825 BMPR2Q13873 1038 aa5.41□□□□□ -1.54
BRCA1-217ENST00000487825 TMEM119Q4V9L6 283 aa5.41□□□□□ -1.54
BRCA1-217ENST00000487825 KHDC1LQ5JSQ8 128 aa5.41□□□□□ -1.54
BRCA1-217ENST00000487825 PLAC9Q5JTB6 97 aa5.41□□□□□ -1.54
BRCA1-217ENST00000487825 FCRLBQ6BAA4 426 aa5.41□□□□□ -1.54
BRCA1-217ENST00000487825 FOXP4Q8IVH2 680 aaPredicted RBP5.41□□□□□ -1.54
BRCA1-217ENST00000487825 FAM109AQ8N4B1 249 aa5.41□□□□□ -1.54
BRCA1-217ENST00000487825 ACER1Q8TDN7 264 aa5.41□□□□□ -1.54
BRCA1-217ENST00000487825 HASPINQ8TF76 798 aa5.41□□□□□ -1.54
BRCA1-217ENST00000487825 DPF1Q92782 380 aa5.41□□□□□ -1.54
BRCA1-217ENST00000487825 RUNDC1Q96C34 613 aa5.41□□□□□ -1.54
BRCA1-217ENST00000487825 SUCLG2Q96I99 432 aa5.41□□□□□ -1.54
BRCA1-217ENST00000487825 RAD9AQ99638 391 aa5.41□□□□□ -1.54
BRCA1-217ENST00000487825 ALDH8A1Q9H2A2 487 aaPredicted RBP5.41□□□□□ -1.54
BRCA1-217ENST00000487825 ARHGEF3Q9NR81 526 aa5.41□□□□□ -1.54
BRCA1-217ENST00000487825 HESX1Q9UBX0 185 aa5.41□□□□□ -1.54
BRCA1-217ENST00000487825 ANKRD6Q9Y2G4 727 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms