RNA–Protein interactions for RNA: ENST00000487709.1

HMGB1P36-201, Transcript of high mobility group box 1 pseudogene 36, humanhuman

BASIC

Gene HMGB1P36, Length 576 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P36-201ENST00000487709 ACSM6Q6P461 480 aa4.22□□□□□ -1.73
HMGB1P36-201ENST00000487709 UEVLDQ8IX04 471 aa4.22□□□□□ -1.73
HMGB1P36-201ENST00000487709 FTSJ3Q8IY81 847 aaKnown RBP4.22□□□□□ -1.73
HMGB1P36-201ENST00000487709 GALNT16Q8N428 558 aa4.22□□□□□ -1.73
HMGB1P36-201ENST00000487709 NRACQ8N912 160 aa4.22□□□□□ -1.73
HMGB1P36-201ENST00000487709 PRSS3P2Q8NHM4 247 aa4.22□□□□□ -1.73
HMGB1P36-201ENST00000487709 NOC3LQ8WTT2 800 aaKnown RBP4.22□□□□□ -1.73
HMGB1P36-201ENST00000487709 AKAP1Q92667 903 aaKnown RBP eCLIP4.22□□□□□ -1.73
HMGB1P36-201ENST00000487709 SENP7Q9BQF6 1050 aa4.22□□□□□ -1.73
HMGB1P36-201ENST00000487709 THAP7Q9BT49 309 aaPredicted RBP4.22□□□□□ -1.73
HMGB1P36-201ENST00000487709 DDX23Q9BUQ8 820 aaKnown RBP4.22□□□□□ -1.73
HMGB1P36-201ENST00000487709 CDCP1Q9H5V8 836 aa4.22□□□□□ -1.73
HMGB1P36-201ENST00000487709 PRDM16Q9HAZ2 1276 aa4.22□□□□□ -1.73
HMGB1P36-201ENST00000487709 RASSF1Q9NS23 344 aa4.22□□□□□ -1.73
HMGB1P36-201ENST00000487709 ABHD10Q9NUJ1 306 aa4.22□□□□□ -1.73
HMGB1P36-201ENST00000487709 SRP68Q9UHB9 627 aaKnown RBP4.22□□□□□ -1.73
HMGB1P36-201ENST00000487709 FZD4Q9ULV1 537 aa4.22□□□□□ -1.73
HMGB1P36-201ENST00000487709 DAPP1Q9UN19 280 aa4.22□□□□□ -1.73
HMGB1P36-201ENST00000487709 VPS4AQ9UN37 437 aa4.22□□□□□ -1.73
HMGB1P36-201ENST00000487709 SCAF8Q9UPN6 1271 aaKnown RBP4.22□□□□□ -1.73
HMGB1P36-201ENST00000487709 ZBTB1Q9Y2K1 713 aa4.22□□□□□ -1.73
HMGB1P36-201ENST00000487709 RRP7AQ9Y3A4 280 aaKnown RBP4.22□□□□□ -1.73
HMGB1P36-201ENST00000487709 SIRT4Q9Y6E7 314 aaPredicted RBP4.22□□□□□ -1.73
HMGB1P36-201ENST00000487709 SPATA31A1Q5TZJ5 1347 aa4.21□□□□□ -1.73
HMGB1P36-201ENST00000487709 CCDC189A1A4V9 331 aa4.21□□□□□ -1.74
HMGB1P36-201ENST00000487709 E7EVH7 732 aa4.21□□□□□ -1.74
HMGB1P36-201ENST00000487709 SOCS2O14508 198 aa4.21□□□□□ -1.74
HMGB1P36-201ENST00000487709 CCNT1O60563 726 aaKnown RBP4.21□□□□□ -1.74
HMGB1P36-201ENST00000487709 TK1P04183 234 aa4.21□□□□□ -1.74
HMGB1P36-201ENST00000487709 ALADP13716 330 aa4.21□□□□□ -1.74
HMGB1P36-201ENST00000487709 RBM5P52756 815 aaKnown RBP eCLIP4.21□□□□□ -1.74
HMGB1P36-201ENST00000487709 PSG6Q00889 435 aa4.21□□□□□ -1.74
HMGB1P36-201ENST00000487709 DEUP1Q05D60 604 aa4.21□□□□□ -1.74
HMGB1P36-201ENST00000487709 POU5F1BQ06416 359 aa4.21□□□□□ -1.74
HMGB1P36-201ENST00000487709 ANKRD1Q15327 319 aa4.21□□□□□ -1.74
HMGB1P36-201ENST00000487709 TAF5Q15542 800 aa4.21□□□□□ -1.74
HMGB1P36-201ENST00000487709 TRIP6Q15654 476 aaKnown RBP4.21□□□□□ -1.74
HMGB1P36-201ENST00000487709 AAK1Q2M2I8 961 aa4.21□□□□□ -1.74
HMGB1P36-201ENST00000487709 ALFQ53S48 1182 aa4.21□□□□□ -1.74
HMGB1P36-201ENST00000487709 RNASE12Q5GAN4 147 aaKnown RBP4.21□□□□□ -1.74
HMGB1P36-201ENST00000487709 MIS18BP1Q6P0N0 1132 aa4.21□□□□□ -1.74
HMGB1P36-201ENST00000487709 RRAGAQ7L523 313 aa4.21□□□□□ -1.74
HMGB1P36-201ENST00000487709 BCDIN3DQ7Z5W3 292 aaKnown RBP4.21□□□□□ -1.74
HMGB1P36-201ENST00000487709 CHSY1Q86X52 802 aa4.21□□□□□ -1.74
HMGB1P36-201ENST00000487709 USP13Q92995 863 aaPredicted RBP4.21□□□□□ -1.74
HMGB1P36-201ENST00000487709 EDC3Q96F86 508 aaKnown RBP4.21□□□□□ -1.74
HMGB1P36-201ENST00000487709 HTATIP2Q9BUP3 242 aa4.21□□□□□ -1.74
HMGB1P36-201ENST00000487709 SAP30LQ9HAJ7 183 aa4.21□□□□□ -1.74
HMGB1P36-201ENST00000487709 MLXIPQ9HAP2 919 aa4.21□□□□□ -1.74
HMGB1P36-201ENST00000487709 VPS45Q9NRW7 570 aa4.21□□□□□ -1.74
HMGB1P36-201ENST00000487709 TRPC5Q9UL62 973 aaPredicted RBP4.21□□□□□ -1.74
HMGB1P36-201ENST00000487709 PCDHGB3Q9Y5G1 929 aa4.21□□□□□ -1.74
HMGB1P36-201ENST00000487709 CYP2D7A0A087X1C5 515 aa4.2□□□□□ -1.74
HMGB1P36-201ENST00000487709 SLC38A8A6NNN8 435 aa4.2□□□□□ -1.74
HMGB1P36-201ENST00000487709 CLIC1O00299 241 aa4.2□□□□□ -1.74
HMGB1P36-201ENST00000487709 FYB1O15117 783 aa4.2□□□□□ -1.74
HMGB1P36-201ENST00000487709 DHHO43323 396 aa4.2□□□□□ -1.74
HMGB1P36-201ENST00000487709 TSPAN3O60637 253 aa4.2□□□□□ -1.74
HMGB1P36-201ENST00000487709 KRT38O76015 456 aa4.2□□□□□ -1.74
HMGB1P36-201ENST00000487709 XBP1P17861 261 aa4.2□□□□□ -1.74
HMGB1P36-201ENST00000487709 TACR3P29371 465 aa4.2□□□□□ -1.74
HMGB1P36-201ENST00000487709 VPS41P49754 854 aa4.2□□□□□ -1.74
HMGB1P36-201ENST00000487709 TAS2R50P59544 299 aa4.2□□□□□ -1.74
HMGB1P36-201ENST00000487709 DAZAP2Q15038 168 aaPredicted RBP4.2□□□□□ -1.74
HMGB1P36-201ENST00000487709 CTXN3Q4LDR2 81 aa4.2□□□□□ -1.74
HMGB1P36-201ENST00000487709 ANO7Q6IWH7 933 aa4.2□□□□□ -1.74
HMGB1P36-201ENST00000487709 CCDC70Q6NSX1 233 aa4.2□□□□□ -1.74
HMGB1P36-201ENST00000487709 MEPCEQ7L2J0 689 aaKnown RBP4.2□□□□□ -1.74
HMGB1P36-201ENST00000487709 IRF2BP2Q7Z5L9 587 aa4.2□□□□□ -1.74
HMGB1P36-201ENST00000487709 MOGAT3Q86VF5 341 aa4.2□□□□□ -1.74
HMGB1P36-201ENST00000487709 LINC01465Q8N7H1 131 aa4.2□□□□□ -1.74
HMGB1P36-201ENST00000487709 ANKRD44Q8N8A2 993 aa4.2□□□□□ -1.74
HMGB1P36-201ENST00000487709 CEP70Q8NHQ1 597 aa4.2□□□□□ -1.74
HMGB1P36-201ENST00000487709 SCAMP5Q8TAC9 235 aa4.2□□□□□ -1.74
HMGB1P36-201ENST00000487709 NSMCE1Q8WV22 266 aa4.2□□□□□ -1.74
HMGB1P36-201ENST00000487709 NPIPB3Q92617 1050 aa4.2□□□□□ -1.74
HMGB1P36-201ENST00000487709 MACROD1Q9BQ69 325 aa4.2□□□□□ -1.74
HMGB1P36-201ENST00000487709 TMEM79Q9BSE2 394 aa4.2□□□□□ -1.74
HMGB1P36-201ENST00000487709 NUAK2Q9H093 628 aa4.2□□□□□ -1.74
HMGB1P36-201ENST00000487709 ERVK-5Q9HDB9 667 aa4.2□□□□□ -1.74
HMGB1P36-201ENST00000487709 G6PC2Q9NQR9 355 aa4.2□□□□□ -1.74
HMGB1P36-201ENST00000487709 GAR1Q9NY12 217 aaKnown RBP4.2□□□□□ -1.74
HMGB1P36-201ENST00000487709 KLHL13Q9P2N7 655 aa4.2□□□□□ -1.74
HMGB1P36-201ENST00000487709 RAB21Q9UL25 225 aa4.2□□□□□ -1.74
HMGB1P36-201ENST00000487709 ASAP1Q9ULH1 1129 aa4.2□□□□□ -1.74
HMGB1P36-201ENST00000487709 SLC8A2Q9UPR5 921 aa4.2□□□□□ -1.74
HMGB1P36-201ENST00000487709 HEMK1Q9Y5R4 338 aaPredicted RBP4.2□□□□□ -1.74
HMGB1P36-201ENST00000487709 LOC105369274A0A096LPK9 316 aa4.19□□□□□ -1.74
HMGB1P36-201ENST00000487709 LOC102723532A0A0G2JNH3 316 aa4.19□□□□□ -1.74
HMGB1P36-201ENST00000487709 CCDC196A0A1B0GTZ2 297 aa4.19□□□□□ -1.74
HMGB1P36-201ENST00000487709 FAM90A18PA6NE21 464 aa4.19□□□□□ -1.74
HMGB1P36-201ENST00000487709 FAM90A16PA6NEW6 464 aa4.19□□□□□ -1.74
HMGB1P36-201ENST00000487709 FAM90A9PA6NNJ1 464 aa4.19□□□□□ -1.74
HMGB1P36-201ENST00000487709 FAM90A5PA8MXJ8 464 aa4.19□□□□□ -1.74
HMGB1P36-201ENST00000487709 EIF3FO00303 357 aaPredicted RBP4.19□□□□□ -1.74
HMGB1P36-201ENST00000487709 PRAMEF2O60811 474 aa4.19□□□□□ -1.74
HMGB1P36-201ENST00000487709 FAM155BO75949 473 aa4.19□□□□□ -1.74
HMGB1P36-201ENST00000487709 FAM90A15PP0C7V4 464 aa4.19□□□□□ -1.74
HMGB1P36-201ENST00000487709 FAM90A14PP0C7W9 464 aa4.19□□□□□ -1.74
HMGB1P36-201ENST00000487709 APEHP13798 732 aaKnown RBP4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms