RNA–Protein interactions for RNA: ENST00000487615.5

TRA2B-214, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,485 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-214ENST00000487615 NFKBIAP25963 317 aa12.09□□□□□ -0.47
TRA2B-214ENST00000487615 PTPN7P35236 360 aa12.09□□□□□ -0.47
TRA2B-214ENST00000487615 VHLP40337 213 aa12.09□□□□□ -0.47
TRA2B-214ENST00000487615 KLC1Q07866 573 aa12.09□□□□□ -0.47
TRA2B-214ENST00000487615 SEL1L3Q68CR1 1132 aa12.09□□□□□ -0.47
TRA2B-214ENST00000487615 SCARA3Q6AZY7 606 aa12.09□□□□□ -0.47
TRA2B-214ENST00000487615 OTOAQ7RTW8 1153 aa12.09□□□□□ -0.47
TRA2B-214ENST00000487615 TFAP2DQ7Z6R9 452 aa12.09□□□□□ -0.47
TRA2B-214ENST00000487615 ZNF467Q7Z7K2 595 aaPredicted RBP12.09□□□□□ -0.47
TRA2B-214ENST00000487615 CCDC126Q96EE4 140 aa12.09□□□□□ -0.47
TRA2B-214ENST00000487615 TMA16Q96EY4 203 aaKnown RBP12.09□□□□□ -0.47
TRA2B-214ENST00000487615 ASIC4Q96FT7 647 aa12.09□□□□□ -0.47
TRA2B-214ENST00000487615 BTBD10Q9BSF8 475 aa12.09□□□□□ -0.47
TRA2B-214ENST00000487615 STARD7Q9NQZ5 370 aa12.09□□□□□ -0.47
TRA2B-214ENST00000487615 KCNK4Q9NYG8 393 aa12.09□□□□□ -0.47
TRA2B-214ENST00000487615 IGKV6D-21A0A0A0MT36 114 aa12.09□□□□□ -0.47
TRA2B-214ENST00000487615 H7C4K7 107 aa12.09□□□□□ -0.47
TRA2B-214ENST00000487615 TPP1O14773 563 aa12.09□□□□□ -0.47
TRA2B-214ENST00000487615 PYGLP06737 847 aa12.09□□□□□ -0.47
TRA2B-214ENST00000487615 CDK7P50613 346 aa12.09□□□□□ -0.47
TRA2B-214ENST00000487615 ARHGAP17Q68EM7 881 aa12.09□□□□□ -0.47
TRA2B-214ENST00000487615 C16orf46Q6P387 395 aa12.09□□□□□ -0.47
TRA2B-214ENST00000487615 ADGRD1Q6QNK2 874 aa12.09□□□□□ -0.47
TRA2B-214ENST00000487615 TMPRSS6Q8IU80 811 aa12.09□□□□□ -0.47
TRA2B-214ENST00000487615 ICA1LQ8NDH6 482 aa12.09□□□□□ -0.47
TRA2B-214ENST00000487615 ACMSDQ8TDX5 336 aa12.09□□□□□ -0.47
TRA2B-214ENST00000487615 MYLPFQ96A32 169 aa12.09□□□□□ -0.47
TRA2B-214ENST00000487615 ZBTB18Q99592 522 aa12.09□□□□□ -0.47
TRA2B-214ENST00000487615 PRKD2Q9BZL6 878 aa12.09□□□□□ -0.47
TRA2B-214ENST00000487615 SDCBP2Q9H190 292 aa12.09□□□□□ -0.47
TRA2B-214ENST00000487615 DPEP3Q9H4B8 488 aa12.09□□□□□ -0.47
TRA2B-214ENST00000487615 SIX4Q9UIU6 781 aa12.09□□□□□ -0.47
TRA2B-214ENST00000487615 BAG5Q9UL15 447 aa12.09□□□□□ -0.47
TRA2B-214ENST00000487615 SLC30A1Q9Y6M5 507 aa12.09□□□□□ -0.47
TRA2B-214ENST00000487615 PRRG1O14668 218 aa12.08□□□□□ -0.48
TRA2B-214ENST00000487615 CLGNO14967 610 aa12.08□□□□□ -0.48
TRA2B-214ENST00000487615 VAPBO95292 243 aa12.08□□□□□ -0.48
TRA2B-214ENST00000487615 ADRA1BP35368 520 aa12.08□□□□□ -0.48
TRA2B-214ENST00000487615 ALDH7A1P49419 539 aaKnown RBP12.08□□□□□ -0.48
TRA2B-214ENST00000487615 AIF1P55008 147 aa12.08□□□□□ -0.48
TRA2B-214ENST00000487615 HDAC4P56524 1084 aa12.08□□□□□ -0.48
TRA2B-214ENST00000487615 KCNJ2P63252 427 aa12.08□□□□□ -0.48
TRA2B-214ENST00000487615 BST1Q10588 318 aa12.08□□□□□ -0.48
TRA2B-214ENST00000487615 SLC1A5Q15758 541 aa12.08□□□□□ -0.48
TRA2B-214ENST00000487615 PDCD2Q16342 344 aaPredicted RBP12.08□□□□□ -0.48
TRA2B-214ENST00000487615 TEDDM1Q5T9Z0 273 aa12.08□□□□□ -0.48
TRA2B-214ENST00000487615 ELMOD1Q8N336 334 aa12.08□□□□□ -0.48
TRA2B-214ENST00000487615 PIP4K2CQ8TBX8 421 aa12.08□□□□□ -0.48
TRA2B-214ENST00000487615 ULK4Q96C45 1275 aa12.08□□□□□ -0.48
TRA2B-214ENST00000487615 EGFL8Q99944 293 aa12.08□□□□□ -0.48
TRA2B-214ENST00000487615 SIKE1Q9BRV8 207 aa12.08□□□□□ -0.48
TRA2B-214ENST00000487615 OSBPL7Q9BZF2 842 aa12.08□□□□□ -0.48
TRA2B-214ENST00000487615 TRPC7Q9HCX4 862 aa12.08□□□□□ -0.48
TRA2B-214ENST00000487615 NCKIPSDQ9NZQ3 722 aa12.08□□□□□ -0.48
TRA2B-214ENST00000487615 ARMCX1Q9P291 453 aa12.08□□□□□ -0.48
TRA2B-214ENST00000487615 SLC17A7Q9P2U7 560 aa12.08□□□□□ -0.48
TRA2B-214ENST00000487615 TPSB2P20231 275 aa12.08□□□□□ -0.48
TRA2B-214ENST00000487615 KLRC2P26717 231 aa12.08□□□□□ -0.48
TRA2B-214ENST00000487615 ECHS1P30084 290 aa12.08□□□□□ -0.48
TRA2B-214ENST00000487615 CD151P48509 253 aa12.08□□□□□ -0.48
TRA2B-214ENST00000487615 LILRA4P59901 499 aa12.08□□□□□ -0.48
TRA2B-214ENST00000487615 TWF1Q12792 350 aa12.08□□□□□ -0.48
TRA2B-214ENST00000487615 ELAVL2Q12926 359 aaKnown RBP12.08□□□□□ -0.48
TRA2B-214ENST00000487615 TSTA3Q13630 321 aaPredicted RBP12.08□□□□□ -0.48
TRA2B-214ENST00000487615 TPSAB1Q15661 275 aa12.08□□□□□ -0.48
TRA2B-214ENST00000487615 SLC39A12Q504Y0 691 aa12.08□□□□□ -0.48
TRA2B-214ENST00000487615 SH3PXD2AQ5TCZ1 1133 aa12.08□□□□□ -0.48
TRA2B-214ENST00000487615 PGLYRP2Q96PD5 576 aa12.08□□□□□ -0.48
TRA2B-214ENST00000487615 CINPQ9BW66 212 aaPredicted RBP12.08□□□□□ -0.48
TRA2B-214ENST00000487615 NDFIP2Q9NV92 336 aa12.08□□□□□ -0.48
TRA2B-214ENST00000487615 NUDT5Q9UKK9 219 aa12.08□□□□□ -0.48
TRA2B-214ENST00000487615 HOXA2O43364 376 aa12.08□□□□□ -0.48
TRA2B-214ENST00000487615 NFKB1P19838 968 aa12.08□□□□□ -0.48
TRA2B-214ENST00000487615 CYP3A5P20815 502 aa12.08□□□□□ -0.48
TRA2B-214ENST00000487615 CLDN10P78369 228 aa12.08□□□□□ -0.48
TRA2B-214ENST00000487615 NBPF20Q3BBV1 942 aa12.08□□□□□ -0.48
TRA2B-214ENST00000487615 WASHC2DQ5SRD0 308 aa12.08□□□□□ -0.48
TRA2B-214ENST00000487615 RNF219Q5W0B1 726 aaPredicted RBP12.08□□□□□ -0.48
TRA2B-214ENST00000487615 UNC5AQ6ZN44 842 aa12.08□□□□□ -0.48
TRA2B-214ENST00000487615 PCDH19Q8TAB3 1148 aa12.08□□□□□ -0.48
TRA2B-214ENST00000487615 ZBED2Q9BTP6 218 aa12.08□□□□□ -0.48
TRA2B-214ENST00000487615 TLR8Q9NR97 1041 aaKnown RBP12.08□□□□□ -0.48
TRA2B-214ENST00000487615 COL24A1Q17RW2 1714 aa12.08□□□□□ -0.48
TRA2B-214ENST00000487615 C5orf60A6NFR6 353 aa12.07□□□□□ -0.48
TRA2B-214ENST00000487615 SLCO1B7G3V0H7 640 aa12.07□□□□□ -0.48
TRA2B-214ENST00000487615 C2CD2LO14523 706 aa12.07□□□□□ -0.48
TRA2B-214ENST00000487615 FGF10O15520 208 aaPredicted RBP12.07□□□□□ -0.48
TRA2B-214ENST00000487615 ALDH2P05091 517 aa12.07□□□□□ -0.48
TRA2B-214ENST00000487615 CD52P31358 61 aa12.07□□□□□ -0.48
TRA2B-214ENST00000487615 CDH5P33151 784 aaPredicted RBP12.07□□□□□ -0.48
TRA2B-214ENST00000487615 ZNF132P52740 706 aa12.07□□□□□ -0.48
TRA2B-214ENST00000487615 BFSP2Q13515 415 aa12.07□□□□□ -0.48
TRA2B-214ENST00000487615 OASLQ15646 514 aaKnown RBP12.07□□□□□ -0.48
TRA2B-214ENST00000487615 LRRC36Q1X8D7 754 aa12.07□□□□□ -0.48
TRA2B-214ENST00000487615 LACTB2Q53H82 288 aaPredicted RBP12.07□□□□□ -0.48
TRA2B-214ENST00000487615 CYP4X1Q8N118 509 aa12.07□□□□□ -0.48
TRA2B-214ENST00000487615 NETO2Q8NC67 525 aa12.07□□□□□ -0.48
TRA2B-214ENST00000487615 USP6NLQ92738 828 aa12.07□□□□□ -0.48
TRA2B-214ENST00000487615 KCTD15Q96SI1 283 aaPredicted RBP12.07□□□□□ -0.48
TRA2B-214ENST00000487615 XYLT2Q9H1B5 865 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms