RNA–Protein interactions for RNA: ENST00000487461.1

VPS16-208, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 634 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-208ENST00000487461 SIN3BO75182 1162 aa12.64□□□□□ -0.39
VPS16-208ENST00000487461 SEMA4FO95754 770 aa12.64□□□□□ -0.39
VPS16-208ENST00000487461 MOCS2O96007 188 aaPredicted RBP12.64□□□□□ -0.39
VPS16-208ENST00000487461 DNTTP04053 509 aa12.64□□□□□ -0.39
VPS16-208ENST00000487461 FTH1P19P0C7X4 201 aa12.64□□□□□ -0.39
VPS16-208ENST00000487461 MATKP42679 507 aa12.64□□□□□ -0.39
VPS16-208ENST00000487461 CTSOP43234 321 aaPredicted RBP12.64□□□□□ -0.39
VPS16-208ENST00000487461 PITX1P78337 314 aaPredicted RBP12.64□□□□□ -0.39
VPS16-208ENST00000487461 NNTQ13423 1086 aa12.64□□□□□ -0.39
VPS16-208ENST00000487461 TAF5Q15542 800 aa12.64□□□□□ -0.39
VPS16-208ENST00000487461 KIF19Q2TAC6 998 aa12.64□□□□□ -0.39
VPS16-208ENST00000487461 ZC3H12AQ5D1E8 599 aaKnown RBP12.64□□□□□ -0.39
VPS16-208ENST00000487461 ZNF776Q68DI1 518 aaPredicted RBP12.64□□□□□ -0.39
VPS16-208ENST00000487461 IL27RAQ6UWB1 636 aa12.64□□□□□ -0.39
VPS16-208ENST00000487461 DBX2Q6ZNG2 339 aa12.64□□□□□ -0.39
VPS16-208ENST00000487461 SLCO6A1Q86UG4 719 aa12.64□□□□□ -0.39
VPS16-208ENST00000487461 ZNF557Q8N988 423 aaPredicted RBP12.64□□□□□ -0.39
VPS16-208ENST00000487461 SETD7Q8WTS6 366 aaKnown RBP12.64□□□□□ -0.39
VPS16-208ENST00000487461 BIRC7Q96CA5 298 aa12.64□□□□□ -0.39
VPS16-208ENST00000487461 MED15Q96RN5 788 aa12.64□□□□□ -0.39
VPS16-208ENST00000487461 CRACR2AQ9BSW2 395 aa12.64□□□□□ -0.39
VPS16-208ENST00000487461 RSPH9Q9H1X1 276 aaPredicted RBP12.64□□□□□ -0.39
VPS16-208ENST00000487461 SGK2Q9HBY8 427 aa12.64□□□□□ -0.39
VPS16-208ENST00000487461 TM7SF3Q9NS93 570 aa12.64□□□□□ -0.39
VPS16-208ENST00000487461 AKAP13Q12802 2813 aa12.64□□□□□ -0.39
VPS16-208ENST00000487461 CABIN1Q9Y6J0 2220 aa12.64□□□□□ -0.39
VPS16-208ENST00000487461 BECN2A8MW95 431 aa12.63□□□□□ -0.39
VPS16-208ENST00000487461 TTC34A8MYJ7 566 aa12.63□□□□□ -0.39
VPS16-208ENST00000487461 E5RJQ4 531 aa12.63□□□□□ -0.39
VPS16-208ENST00000487461 KCNK3O14649 394 aa12.63□□□□□ -0.39
VPS16-208ENST00000487461 CAPN9O14815 690 aa12.63□□□□□ -0.39
VPS16-208ENST00000487461 THAP12O43422 761 aa12.63□□□□□ -0.39
VPS16-208ENST00000487461 MED7O43513 233 aa12.63□□□□□ -0.39
VPS16-208ENST00000487461 FSBPO95073 299 aa12.63□□□□□ -0.39
VPS16-208ENST00000487461 LUC7L3O95232 432 aaKnown RBP12.63□□□□□ -0.39
VPS16-208ENST00000487461 FGFR1OPO95684 399 aaKnown RBP12.63□□□□□ -0.39
VPS16-208ENST00000487461 CER1O95813 267 aa12.63□□□□□ -0.39
VPS16-208ENST00000487461 TRUB2O95900 331 aaKnown RBP12.63□□□□□ -0.39
VPS16-208ENST00000487461 IGLV3-25P01717 112 aa12.63□□□□□ -0.39
VPS16-208ENST00000487461 ASLP04424 464 aa12.63□□□□□ -0.39
VPS16-208ENST00000487461 ZNF883P0CG24 379 aa12.63□□□□□ -0.39
VPS16-208ENST00000487461 SLC9A1P19634 815 aa12.63□□□□□ -0.39
VPS16-208ENST00000487461 AFF3P51826 1226 aaKnown RBP12.63□□□□□ -0.39
VPS16-208ENST00000487461 ST8SIA6P61647 398 aa12.63□□□□□ -0.39
VPS16-208ENST00000487461 YWHAZP63104 245 aaKnown RBP12.63□□□□□ -0.39
VPS16-208ENST00000487461 APBA1Q02410 837 aa12.63□□□□□ -0.39
VPS16-208ENST00000487461 EIF4EBP2Q13542 120 aaPredicted RBP12.63□□□□□ -0.39
VPS16-208ENST00000487461 MEA1Q16626 185 aa12.63□□□□□ -0.39
VPS16-208ENST00000487461 HNRNPA1L2Q32P51 320 aaKnown RBP12.63□□□□□ -0.39
VPS16-208ENST00000487461 PITRM1Q5JRX3 1037 aa12.63□□□□□ -0.39
VPS16-208ENST00000487461 KCNT1Q5JUK3 1230 aa12.63□□□□□ -0.39
VPS16-208ENST00000487461 C9orf64Q5T6V5 341 aa12.63□□□□□ -0.39
VPS16-208ENST00000487461 RAP1GAP2Q684P5 730 aa12.63□□□□□ -0.39
VPS16-208ENST00000487461 CREBRFQ8IUR6 639 aa12.63□□□□□ -0.39
VPS16-208ENST00000487461 DHX40Q8IX18 779 aaKnown RBP12.63□□□□□ -0.39
VPS16-208ENST00000487461 APCDD1Q8J025 514 aa12.63□□□□□ -0.39
VPS16-208ENST00000487461 LGI2Q8N0V4 545 aa12.63□□□□□ -0.39
VPS16-208ENST00000487461 WDTC1Q8N5D0 677 aa12.63□□□□□ -0.39
VPS16-208ENST00000487461 ADAMTS14Q8WXS8 1223 aa12.63□□□□□ -0.39
VPS16-208ENST00000487461 ORAI3Q9BRQ5 295 aa12.63□□□□□ -0.39
VPS16-208ENST00000487461 PABPC3Q9H361 631 aaKnown RBP12.63□□□□□ -0.39
VPS16-208ENST00000487461 THAP9Q9H5L6 903 aa12.63□□□□□ -0.39
VPS16-208ENST00000487461 POPDC2Q9HBU9 364 aa12.63□□□□□ -0.39
VPS16-208ENST00000487461 TM9SF3Q9HD45 589 aa12.63□□□□□ -0.39
VPS16-208ENST00000487461 OSGEPQ9NPF4 335 aa12.63□□□□□ -0.39
VPS16-208ENST00000487461 FBXL12Q9NXK8 326 aa12.63□□□□□ -0.39
VPS16-208ENST00000487461 KIAA1522Q9P206 1035 aaPredicted RBP12.63□□□□□ -0.39
VPS16-208ENST00000487461 TJP2Q9UDY2 1190 aa12.63□□□□□ -0.39
VPS16-208ENST00000487461 SLCO3A1Q9UIG8 710 aa12.63□□□□□ -0.39
VPS16-208ENST00000487461 ERVW-1Q9UQF0 538 aa12.63□□□□□ -0.39
VPS16-208ENST00000487461 ANKRD6Q9Y2G4 727 aa12.63□□□□□ -0.39
VPS16-208ENST00000487461 SNX11Q9Y5W9 270 aa12.63□□□□□ -0.39
VPS16-208ENST00000487461 MUC22E2RYF6 1773 aaPredicted RBP12.62□□□□□ -0.39
VPS16-208ENST00000487461 TYW5A2RUC4 315 aaKnown RBP12.62□□□□□ -0.39
VPS16-208ENST00000487461 SRRM3A6NNA2 597 aaPredicted RBP12.62□□□□□ -0.39
VPS16-208ENST00000487461 CAPNS1P04632 268 aa12.62□□□□□ -0.39
VPS16-208ENST00000487461 IGHV4-34P06331 123 aa12.62□□□□□ -0.39
VPS16-208ENST00000487461 SRPRAP08240 638 aaKnown RBP12.62□□□□□ -0.39
VPS16-208ENST00000487461 TACR2P21452 398 aa12.62□□□□□ -0.39
VPS16-208ENST00000487461 CD27P26842 260 aa12.62□□□□□ -0.39
VPS16-208ENST00000487461 GNA15P30679 374 aa12.62□□□□□ -0.39
VPS16-208ENST00000487461 GALCP54803 685 aa12.62□□□□□ -0.39
VPS16-208ENST00000487461 CDH18Q13634 790 aa12.62□□□□□ -0.39
VPS16-208ENST00000487461 ARID5BQ14865 1188 aa12.62□□□□□ -0.39
VPS16-208ENST00000487461 ARHGAP44Q17R89 818 aa12.62□□□□□ -0.39
VPS16-208ENST00000487461 TTC31Q49AM3 519 aaPredicted RBP12.62□□□□□ -0.39
VPS16-208ENST00000487461 TRIM65Q6PJ69 517 aa12.62□□□□□ -0.39
VPS16-208ENST00000487461 LAYNQ6UX15 382 aa12.62□□□□□ -0.39
VPS16-208ENST00000487461 USP30Q70CQ3 517 aa12.62□□□□□ -0.39
VPS16-208ENST00000487461 ENOSF1Q7L5Y1 443 aa12.62□□□□□ -0.39
VPS16-208ENST00000487461 GLRX5Q86SX6 157 aa12.62□□□□□ -0.39
VPS16-208ENST00000487461 IRF2BP1Q8IU81 584 aa12.62□□□□□ -0.39
VPS16-208ENST00000487461 CCDC117Q8IWD4 279 aaPredicted RBP12.62□□□□□ -0.39
VPS16-208ENST00000487461 KDM1BQ8NB78 822 aa12.62□□□□□ -0.39
VPS16-208ENST00000487461 RHBDD1Q8TEB9 315 aa12.62□□□□□ -0.39
VPS16-208ENST00000487461 GANCQ8TET4 914 aa12.62□□□□□ -0.39
VPS16-208ENST00000487461 ZCCHC14Q8WYQ9 949 aaKnown RBP12.62□□□□□ -0.39
VPS16-208ENST00000487461 BTN2A3PQ96KV6 586 aa12.62□□□□□ -0.39
VPS16-208ENST00000487461 FAM129BQ96TA1 746 aa12.62□□□□□ -0.39
VPS16-208ENST00000487461 NEUROG2Q9H2A3 272 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms