RNA–Protein interactions for RNA: ENST00000487401.1

SREBF1-215, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-215ENST00000487401 MAN2A1Q16706 1144 aa12.88□□□□□ -0.35
SREBF1-215ENST00000487401 HNRNPA1L2Q32P51 320 aaKnown RBP12.88□□□□□ -0.35
SREBF1-215ENST00000487401 FSCBQ5H9T9 825 aa12.88□□□□□ -0.35
SREBF1-215ENST00000487401 PITRM1Q5JRX3 1037 aa12.88□□□□□ -0.35
SREBF1-215ENST00000487401 SMYD5Q6GMV2 418 aa12.88□□□□□ -0.35
SREBF1-215ENST00000487401 OR6B2Q6IFH4 312 aa12.88□□□□□ -0.35
SREBF1-215ENST00000487401 MMS22LQ6ZRQ5 1243 aa12.88□□□□□ -0.35
SREBF1-215ENST00000487401 C11orf57Q6ZUT1 292 aaPredicted RBP12.88□□□□□ -0.35
SREBF1-215ENST00000487401 DEFB106AQ8N104 65 aa12.88□□□□□ -0.35
SREBF1-215ENST00000487401 KDM1BQ8NB78 822 aa12.88□□□□□ -0.35
SREBF1-215ENST00000487401 SHC3Q92529 594 aa12.88□□□□□ -0.35
SREBF1-215ENST00000487401 PDCL3Q9H2J4 239 aa12.88□□□□□ -0.35
SREBF1-215ENST00000487401 CLSTN2Q9H4D0 955 aa12.88□□□□□ -0.35
SREBF1-215ENST00000487401 MTG2Q9H4K7 406 aa12.88□□□□□ -0.35
SREBF1-215ENST00000487401 C6orf106Q9H6K1 298 aaPredicted RBP12.88□□□□□ -0.35
SREBF1-215ENST00000487401 SYNCQ9H7C4 482 aa12.88□□□□□ -0.35
SREBF1-215ENST00000487401 ASNSD1Q9NWL6 643 aa12.88□□□□□ -0.35
SREBF1-215ENST00000487401 COX16Q9P0S2 106 aa12.88□□□□□ -0.35
SREBF1-215ENST00000487401 DACH1Q9UI36 760 aa12.88□□□□□ -0.35
SREBF1-215ENST00000487401 XPO7Q9UIA9 1087 aaKnown RBP12.88□□□□□ -0.35
SREBF1-215ENST00000487401 DNAJC12Q9UKB3 198 aa12.88□□□□□ -0.35
SREBF1-215ENST00000487401 ERVW-1Q9UQF0 538 aa12.88□□□□□ -0.35
SREBF1-215ENST00000487401 ACACBO00763 2458 aa12.87□□□□□ -0.35
SREBF1-215ENST00000487401 TARSL2A2RTX5 802 aaKnown RBP12.87□□□□□ -0.35
SREBF1-215ENST00000487401 KCNU1A8MYU2 1149 aa12.87□□□□□ -0.35
SREBF1-215ENST00000487401 PES1O00541 588 aaKnown RBP12.87□□□□□ -0.35
SREBF1-215ENST00000487401 HSF2BPO75031 334 aa12.87□□□□□ -0.35
SREBF1-215ENST00000487401 SIN3BO75182 1162 aa12.87□□□□□ -0.35
SREBF1-215ENST00000487401 FSBPO95073 299 aa12.87□□□□□ -0.35
SREBF1-215ENST00000487401 TRIM16O95361 564 aa12.87□□□□□ -0.35
SREBF1-215ENST00000487401 CER1O95813 267 aa12.87□□□□□ -0.35
SREBF1-215ENST00000487401 TOP3BO95985 862 aaKnown RBP12.87□□□□□ -0.35
SREBF1-215ENST00000487401 PROS1P07225 676 aa12.87□□□□□ -0.35
SREBF1-215ENST00000487401 SRPRAP08240 638 aaKnown RBP12.87□□□□□ -0.35
SREBF1-215ENST00000487401 PRKCSHP14314 528 aaPredicted RBP12.87□□□□□ -0.35
SREBF1-215ENST00000487401 CCR1P32246 355 aa12.87□□□□□ -0.35
SREBF1-215ENST00000487401 NNMTP40261 264 aa12.87□□□□□ -0.35
SREBF1-215ENST00000487401 MATKP42679 507 aa12.87□□□□□ -0.35
SREBF1-215ENST00000487401 AFF3P51826 1226 aaKnown RBP12.87□□□□□ -0.35
SREBF1-215ENST00000487401 BPIFB4P59827 614 aa12.87□□□□□ -0.35
SREBF1-215ENST00000487401 ECT2LQ008S8 904 aa12.87□□□□□ -0.35
SREBF1-215ENST00000487401 TEAD4Q15561 434 aa12.87□□□□□ -0.35
SREBF1-215ENST00000487401 TRIP6Q15654 476 aaKnown RBP12.87□□□□□ -0.35
SREBF1-215ENST00000487401 VWA3BQ502W6 1294 aa12.87□□□□□ -0.35
SREBF1-215ENST00000487401 RABGAP1LQ5R372 815 aa12.87□□□□□ -0.35
SREBF1-215ENST00000487401 LRSAM1Q6UWE0 723 aa12.87□□□□□ -0.35
SREBF1-215ENST00000487401 DHX40Q8IX18 779 aaKnown RBP12.87□□□□□ -0.35
SREBF1-215ENST00000487401 WDTC1Q8N5D0 677 aa12.87□□□□□ -0.35
SREBF1-215ENST00000487401 CAMK1GQ96NX5 476 aa12.87□□□□□ -0.35
SREBF1-215ENST00000487401 SLC2A13Q96QE2 648 aa12.87□□□□□ -0.35
SREBF1-215ENST00000487401 CPXM1Q96SM3 734 aa12.87□□□□□ -0.35
SREBF1-215ENST00000487401 SCNM1Q9BWG6 230 aa12.87□□□□□ -0.35
SREBF1-215ENST00000487401 RSPH9Q9H1X1 276 aaPredicted RBP12.87□□□□□ -0.35
SREBF1-215ENST00000487401 GAREM1Q9H706 876 aa12.87□□□□□ -0.35
SREBF1-215ENST00000487401 DDIT4Q9NX09 232 aa12.87□□□□□ -0.35
SREBF1-215ENST00000487401 FBXL12Q9NXK8 326 aa12.87□□□□□ -0.35
SREBF1-215ENST00000487401 INTS6Q9UL03 887 aaKnown RBP12.87□□□□□ -0.35
SREBF1-215ENST00000487401 SCML1Q9UN30 329 aa12.87□□□□□ -0.35
SREBF1-215ENST00000487401 PCDHGC3Q9UN70 934 aa12.87□□□□□ -0.35
SREBF1-215ENST00000487401 ABCA7Q8IZY2 2146 aa12.86□□□□□ -0.35
SREBF1-215ENST00000487401 EPG5Q9HCE0 2579 aa12.86□□□□□ -0.35
SREBF1-215ENST00000487401 EDDM13A0A1B0GTR0 161 aa12.86□□□□□ -0.35
SREBF1-215ENST00000487401 A0A1B0GVT2 93 aa12.86□□□□□ -0.35
SREBF1-215ENST00000487401 TTC34A8MYJ7 566 aa12.86□□□□□ -0.35
SREBF1-215ENST00000487401 FOXN3O00409 490 aaPredicted RBP12.86□□□□□ -0.35
SREBF1-215ENST00000487401 GJB3O75712 270 aa12.86□□□□□ -0.35
SREBF1-215ENST00000487401 GRAP2O75791 330 aa12.86□□□□□ -0.35
SREBF1-215ENST00000487401 IGLV3-25P01717 112 aa12.86□□□□□ -0.35
SREBF1-215ENST00000487401 C7P10643 843 aa12.86□□□□□ -0.35
SREBF1-215ENST00000487401 ERCC5P28715 1186 aaPredicted RBP12.86□□□□□ -0.35
SREBF1-215ENST00000487401 CTSOP43234 321 aaPredicted RBP12.86□□□□□ -0.35
SREBF1-215ENST00000487401 CSNK1EP49674 416 aaKnown RBP12.86□□□□□ -0.35
SREBF1-215ENST00000487401 OXCT1P55809 520 aa12.86□□□□□ -0.35
SREBF1-215ENST00000487401 PITX1P78337 314 aaPredicted RBP12.86□□□□□ -0.35
SREBF1-215ENST00000487401 NME3Q13232 169 aa12.86□□□□□ -0.35
SREBF1-215ENST00000487401 MTA1Q13330 715 aa12.86□□□□□ -0.35
SREBF1-215ENST00000487401 SLC12A1Q13621 1099 aa12.86□□□□□ -0.35
SREBF1-215ENST00000487401 ARID5BQ14865 1188 aa12.86□□□□□ -0.35
SREBF1-215ENST00000487401 ZNF423Q2M1K9 1284 aa12.86□□□□□ -0.35
SREBF1-215ENST00000487401 HLA-BQ31612 363 aa12.86□□□□□ -0.35
SREBF1-215ENST00000487401 C9orf64Q5T6V5 341 aa12.86□□□□□ -0.35
SREBF1-215ENST00000487401 TTC39BQ5VTQ0 682 aaPredicted RBP12.86□□□□□ -0.35
SREBF1-215ENST00000487401 UNQ6494/PRO21346Q6UXR6 183 aa12.86□□□□□ -0.35
SREBF1-215ENST00000487401 USP30Q70CQ3 517 aa12.86□□□□□ -0.35
SREBF1-215ENST00000487401 NAXDQ8IW45 347 aa12.86□□□□□ -0.35
SREBF1-215ENST00000487401 C1orf131Q8NDD1 294 aaKnown RBP12.86□□□□□ -0.35
SREBF1-215ENST00000487401 SETD7Q8WTS6 366 aaKnown RBP12.86□□□□□ -0.35
SREBF1-215ENST00000487401 MRGPRX3Q96LB0 322 aa12.86□□□□□ -0.35
SREBF1-215ENST00000487401 PPP1R9BQ96SB3 815 aa12.86□□□□□ -0.35
SREBF1-215ENST00000487401 TUBGCP2Q9BSJ2 902 aa12.86□□□□□ -0.35
SREBF1-215ENST00000487401 ADAM33Q9BZ11 813 aa12.86□□□□□ -0.35
SREBF1-215ENST00000487401 PABPC3Q9H361 631 aaKnown RBP12.86□□□□□ -0.35
SREBF1-215ENST00000487401 NDST4Q9H3R1 872 aa12.86□□□□□ -0.35
SREBF1-215ENST00000487401 WASF3Q9UPY6 502 aa12.86□□□□□ -0.35
SREBF1-215ENST00000487401 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.86□□□□□ -0.35
SREBF1-215ENST00000487401 FAM47DPA6NHR8 397 aa12.85□□□□□ -0.35
SREBF1-215ENST00000487401 C1QTNF9BB2RNN3 333 aa12.85□□□□□ -0.35
SREBF1-215ENST00000487401 HYAL3O43820 417 aaPredicted RBP12.85□□□□□ -0.35
SREBF1-215ENST00000487401 RNASEH2AO75792 299 aaKnown RBP12.85□□□□□ -0.35
SREBF1-215ENST00000487401 C1QTNF9P0C862 333 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms