RNA–Protein interactions for RNA: ENST00000487245.5

HLA-C-208, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,880 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-208ENST00000487245 DAOAP59103 153 aa26.81■■□□□ 1.88
HLA-C-208ENST00000487245 AP1B1Q10567 949 aa26.81■■□□□ 1.88
HLA-C-208ENST00000487245 SCAPQ12770 1279 aa26.81■■□□□ 1.88
HLA-C-208ENST00000487245 ALYREFQ86V81 257 aaKnown RBP26.81■■□□□ 1.88
HLA-C-208ENST00000487245 ARID3BQ8IVW6 561 aaPredicted RBP26.81■■□□□ 1.88
HLA-C-208ENST00000487245 P2RY11Q96G91 374 aa26.81■■□□□ 1.88
HLA-C-208ENST00000487245 THAP1Q9NVV9 213 aa26.81■■□□□ 1.88
HLA-C-208ENST00000487245 DONSONQ9NYP3 566 aa26.81■■□□□ 1.88
HLA-C-208ENST00000487245 SORCS3Q9UPU3 1222 aa26.81■■□□□ 1.88
HLA-C-208ENST00000487245 C2orf71A6NGG8 1288 aa26.81■■□□□ 1.88
HLA-C-208ENST00000487245 RNF103O00237 685 aa26.81■■□□□ 1.88
HLA-C-208ENST00000487245 AP1G2O75843 785 aa26.81■■□□□ 1.88
HLA-C-208ENST00000487245 ZNF135P52742 658 aaPredicted RBP26.81■■□□□ 1.88
HLA-C-208ENST00000487245 STX3Q13277 289 aa26.81■■□□□ 1.88
HLA-C-208ENST00000487245 KIAA0319Q5VV43 1072 aa26.81■■□□□ 1.88
HLA-C-208ENST00000487245 SYPL2Q5VXT5 272 aa26.81■■□□□ 1.88
HLA-C-208ENST00000487245 RFX8Q6ZV50 586 aa26.81■■□□□ 1.88
HLA-C-208ENST00000487245 FAM35AQ86V20 835 aa26.81■■□□□ 1.88
HLA-C-208ENST00000487245 RASAL3Q86YV0 1011 aa26.81■■□□□ 1.88
HLA-C-208ENST00000487245 TMPRSS6Q8IU80 811 aa26.81■■□□□ 1.88
HLA-C-208ENST00000487245 CDKL2Q92772 493 aa26.81■■□□□ 1.88
HLA-C-208ENST00000487245 PGAP3Q96FM1 320 aaPredicted RBP26.81■■□□□ 1.88
HLA-C-208ENST00000487245 TRIM56Q9BRZ2 755 aaKnown RBP26.81■■□□□ 1.88
HLA-C-208ENST00000487245 ULBP1Q9BZM6 244 aa26.81■■□□□ 1.88
HLA-C-208ENST00000487245 ACADSP16219 412 aa26.8■■□□□ 1.88
HLA-C-208ENST00000487245 PGAM1P18669 254 aa26.8■■□□□ 1.88
HLA-C-208ENST00000487245 PITX1P78337 314 aaPredicted RBP26.8■■□□□ 1.88
HLA-C-208ENST00000487245 NME3Q13232 169 aa26.8■■□□□ 1.88
HLA-C-208ENST00000487245 CST9Q5W186 159 aa26.8■■□□□ 1.88
HLA-C-208ENST00000487245 STN1Q9H668 368 aaKnown RBP26.8■■□□□ 1.88
HLA-C-208ENST00000487245 IGSF9Q9P2J2 1179 aa26.8■■□□□ 1.88
HLA-C-208ENST00000487245 DCLK1O15075 740 aa26.79■■□□□ 1.88
HLA-C-208ENST00000487245 NCAM2O15394 837 aa26.79■■□□□ 1.88
HLA-C-208ENST00000487245 CREB3O43889 395 aa26.79■■□□□ 1.88
HLA-C-208ENST00000487245 GLRA3O75311 464 aa26.79■■□□□ 1.88
HLA-C-208ENST00000487245 TSNAXIP1Q2TAA8 658 aa26.79■■□□□ 1.88
HLA-C-208ENST00000487245 RAB41Q5JT25 222 aa26.79■■□□□ 1.88
HLA-C-208ENST00000487245 CCDC33Q8N5R6 958 aa26.79■■□□□ 1.88
HLA-C-208ENST00000487245 GSTCDQ8NEC7 633 aa26.79■■□□□ 1.88
HLA-C-208ENST00000487245 BRD8Q9H0E9 1235 aa26.79■■□□□ 1.88
HLA-C-208ENST00000487245 PIGVQ9NUD9 493 aa26.79■■□□□ 1.88
HLA-C-208ENST00000487245 SYNJ2BP-COX16A0A087WUM0 186 aa26.79■■□□□ 1.88
HLA-C-208ENST00000487245 WDR27A2RRH5 827 aa26.79■■□□□ 1.88
HLA-C-208ENST00000487245 GSRP00390 522 aa26.79■■□□□ 1.88
HLA-C-208ENST00000487245 F9P00740 461 aa26.79■■□□□ 1.88
HLA-C-208ENST00000487245 C6orf222P0C671 652 aaPredicted RBP26.79■■□□□ 1.88
HLA-C-208ENST00000487245 PCSK1P29120 753 aa26.79■■□□□ 1.88
HLA-C-208ENST00000487245 MLH1P40692 756 aa26.79■■□□□ 1.88
HLA-C-208ENST00000487245 ARL13BQ3SXY8 428 aa26.79■■□□□ 1.88
HLA-C-208ENST00000487245 ACSBG2Q5FVE4 666 aa26.79■■□□□ 1.88
HLA-C-208ENST00000487245 PACS1Q6VY07 963 aa26.79■■□□□ 1.88
HLA-C-208ENST00000487245 CCNYQ8ND76 341 aa26.79■■□□□ 1.88
HLA-C-208ENST00000487245 SLC7A14Q8TBB6 771 aa26.79■■□□□ 1.88
HLA-C-208ENST00000487245 GAD1Q99259 594 aa26.79■■□□□ 1.88
HLA-C-208ENST00000487245 SMOQ99835 787 aa26.79■■□□□ 1.88
HLA-C-208ENST00000487245 CCDC106Q9BWC9 280 aa26.79■■□□□ 1.88
HLA-C-208ENST00000487245 PRDM12Q9H4Q4 367 aa26.79■■□□□ 1.88
HLA-C-208ENST00000487245 COX16Q9P0S2 106 aa26.79■■□□□ 1.88
HLA-C-208ENST00000487245 PPARGC1AQ9UBK2 798 aaKnown RBP26.79■■□□□ 1.88
HLA-C-208ENST00000487245 TAGLN3Q9UI15 199 aa26.79■■□□□ 1.88
HLA-C-208ENST00000487245 NRP1O14786 923 aa26.78■■□□□ 1.88
HLA-C-208ENST00000487245 TNPO2O14787 897 aaKnown RBP26.78■■□□□ 1.88
HLA-C-208ENST00000487245 ZNF157P51786 506 aaPredicted RBP26.78■■□□□ 1.88
HLA-C-208ENST00000487245 IFRD2Q12894 506 aaPredicted RBP26.78■■□□□ 1.88
HLA-C-208ENST00000487245 INSCQ1MX18 579 aa26.78■■□□□ 1.88
HLA-C-208ENST00000487245 INTS6LQ5JSJ4 861 aaKnown RBP26.78■■□□□ 1.88
HLA-C-208ENST00000487245 HFE2Q6ZVN8 426 aa26.78■■□□□ 1.88
HLA-C-208ENST00000487245 TREML1Q86YW5 311 aa26.78■■□□□ 1.88
HLA-C-208ENST00000487245 ARNTL2Q8WYA1 636 aa26.78■■□□□ 1.88
HLA-C-208ENST00000487245 RRAGCQ9HB90 399 aa26.78■■□□□ 1.88
HLA-C-208ENST00000487245 DCDC2Q9UHG0 476 aa26.78■■□□□ 1.88
HLA-C-208ENST00000487245 FBXW11Q9UKB1 542 aa26.78■■□□□ 1.88
HLA-C-208ENST00000487245 TSC2P49815 1807 aa26.77■■□□□ 1.88
HLA-C-208ENST00000487245 F8W8V4 182 aa26.77■■□□□ 1.88
HLA-C-208ENST00000487245 H0Y3Z8 333 aa26.77■■□□□ 1.88
HLA-C-208ENST00000487245 GPR182O15218 404 aa26.77■■□□□ 1.88
HLA-C-208ENST00000487245 PSMG1O95456 288 aa26.77■■□□□ 1.88
HLA-C-208ENST00000487245 FYNP06241 537 aa26.77■■□□□ 1.88
HLA-C-208ENST00000487245 SERPINA6P08185 405 aa26.77■■□□□ 1.88
HLA-C-208ENST00000487245 VHLP40337 213 aa26.77■■□□□ 1.88
HLA-C-208ENST00000487245 AQP5P55064 265 aa26.77■■□□□ 1.88
HLA-C-208ENST00000487245 KPNB1Q14974 876 aaKnown RBP26.77■■□□□ 1.88
HLA-C-208ENST00000487245 MBLAC2Q68D91 279 aa26.77■■□□□ 1.88
HLA-C-208ENST00000487245 MRPL10Q7Z7H8 261 aaKnown RBP26.77■■□□□ 1.88
HLA-C-208ENST00000487245 PDCD7Q8N8D1 485 aaKnown RBP26.77■■□□□ 1.88
HLA-C-208ENST00000487245 ARMCX1Q9P291 453 aa26.77■■□□□ 1.88
HLA-C-208ENST00000487245 EMCNQ9ULC0 261 aa26.77■■□□□ 1.88
HLA-C-208ENST00000487245 CCDC195A0A1B0GUA6 201 aa26.76■■□□□ 1.88
HLA-C-208ENST00000487245 SMNDC1O75940 238 aaKnown RBP eCLIP26.76■■□□□ 1.88
HLA-C-208ENST00000487245 PGM1P36871 562 aa26.76■■□□□ 1.88
HLA-C-208ENST00000487245 ABL2P42684 1182 aa26.76■■□□□ 1.88
HLA-C-208ENST00000487245 INHBEP58166 350 aa26.76■■□□□ 1.88
HLA-C-208ENST00000487245 FASTKD1Q53R41 847 aaKnown RBP26.76■■□□□ 1.88
HLA-C-208ENST00000487245 GNASQ5JWF2 1037 aa26.76■■□□□ 1.88
HLA-C-208ENST00000487245 PCED1BQ96HM7 432 aa26.76■■□□□ 1.88
HLA-C-208ENST00000487245 SENP6Q9GZR1 1112 aaPredicted RBP26.76■■□□□ 1.88
HLA-C-208ENST00000487245 ZFYVE28Q9HCC9 887 aa26.76■■□□□ 1.88
HLA-C-208ENST00000487245 XPNPEP3Q9NQH7 507 aa26.76■■□□□ 1.88
HLA-C-208ENST00000487245 B2RBV5 119 aa26.76■■□□□ 1.87
HLA-C-208ENST00000487245 MTSS1O43312 755 aa26.76■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms