RNA–Protein interactions for RNA: ENST00000486828.6

PDLIM7-207, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-207ENST00000486828 WASHC2DQ5SRD0 308 aa18.47■□□□□ 0.55
PDLIM7-207ENST00000486828 GPRIN1Q7Z2K8 1008 aa18.47■□□□□ 0.55
PDLIM7-207ENST00000486828 RPAINQ86UA6 219 aa18.47■□□□□ 0.55
PDLIM7-207ENST00000486828 TP53INP2Q8IXH6 220 aa18.47■□□□□ 0.55
PDLIM7-207ENST00000486828 DDX51Q8N8A6 666 aaKnown RBP eCLIP18.47■□□□□ 0.55
PDLIM7-207ENST00000486828 ZMIZ2Q8NF64 920 aa18.47■□□□□ 0.55
PDLIM7-207ENST00000486828 PCED1BQ96HM7 432 aa18.47■□□□□ 0.55
PDLIM7-207ENST00000486828 XPNPEP3Q9NQH7 507 aa18.47■□□□□ 0.55
PDLIM7-207ENST00000486828 SLC17A6Q9P2U8 582 aa18.47■□□□□ 0.55
PDLIM7-207ENST00000486828 FBXW11Q9UKB1 542 aa18.47■□□□□ 0.55
PDLIM7-207ENST00000486828 TRPV2Q9Y5S1 764 aa18.47■□□□□ 0.55
PDLIM7-207ENST00000486828 PTCH2Q9Y6C5 1203 aa18.47■□□□□ 0.55
PDLIM7-207ENST00000486828 CCDC195A0A1B0GUA6 201 aa18.46■□□□□ 0.55
PDLIM7-207ENST00000486828 MYBPHLA2RUH7 354 aa18.46■□□□□ 0.55
PDLIM7-207ENST00000486828 C2orf71A6NGG8 1288 aa18.46■□□□□ 0.55
PDLIM7-207ENST00000486828 SNNO75324 88 aaPredicted RBP18.46■□□□□ 0.55
PDLIM7-207ENST00000486828 THP07101 528 aa18.46■□□□□ 0.55
PDLIM7-207ENST00000486828 RGS2P41220 211 aa18.46■□□□□ 0.55
PDLIM7-207ENST00000486828 RABGGTBP53611 331 aa18.46■□□□□ 0.55
PDLIM7-207ENST00000486828 TPI1P60174 286 aa18.46■□□□□ 0.55
PDLIM7-207ENST00000486828 BSPRYQ5W0U4 402 aa18.46■□□□□ 0.55
PDLIM7-207ENST00000486828 PID1Q7Z2X4 250 aa18.46■□□□□ 0.55
PDLIM7-207ENST00000486828 ADAM32Q8TC27 787 aa18.46■□□□□ 0.55
PDLIM7-207ENST00000486828 PRR11Q96HE9 360 aaPredicted RBP18.46■□□□□ 0.55
PDLIM7-207ENST00000486828 GAD1Q99259 594 aa18.46■□□□□ 0.55
PDLIM7-207ENST00000486828 MIPEPQ99797 713 aa18.46■□□□□ 0.55
PDLIM7-207ENST00000486828 BTBD10Q9BSF8 475 aa18.46■□□□□ 0.55
PDLIM7-207ENST00000486828 ANLNQ9NQW6 1124 aa18.46■□□□□ 0.55
PDLIM7-207ENST00000486828 CDH9Q9ULB4 789 aa18.46■□□□□ 0.55
PDLIM7-207ENST00000486828 ST3GAL5Q9UNP4 418 aa18.46■□□□□ 0.55
PDLIM7-207ENST00000486828 I6L893 689 aaPredicted RBP18.45■□□□□ 0.54
PDLIM7-207ENST00000486828 FCHO1O14526 889 aa18.45■□□□□ 0.54
PDLIM7-207ENST00000486828 NCAM2O15394 837 aa18.45■□□□□ 0.54
PDLIM7-207ENST00000486828 IGHA2P01877 340 aa18.45■□□□□ 0.54
PDLIM7-207ENST00000486828 ALDOAP04075 364 aaKnown RBP18.45■□□□□ 0.54
PDLIM7-207ENST00000486828 CALB2P22676 271 aa18.45■□□□□ 0.54
PDLIM7-207ENST00000486828 PTPN3P26045 913 aa18.45■□□□□ 0.54
PDLIM7-207ENST00000486828 CLCNKBP51801 687 aa18.45■□□□□ 0.54
PDLIM7-207ENST00000486828 TLDC1Q6P9B6 456 aa18.45■□□□□ 0.54
PDLIM7-207ENST00000486828 DSTYKQ6XUX3 929 aa18.45■□□□□ 0.54
PDLIM7-207ENST00000486828 REM2Q8IYK8 340 aaPredicted RBP18.45■□□□□ 0.54
PDLIM7-207ENST00000486828 KCNK16Q96T55 309 aa18.45■□□□□ 0.54
PDLIM7-207ENST00000486828 APBA2Q99767 749 aa18.45■□□□□ 0.54
PDLIM7-207ENST00000486828 TMEM30AQ9NV96 361 aa18.45■□□□□ 0.54
PDLIM7-207ENST00000486828 RRN3Q9NYV6 651 aa18.45■□□□□ 0.54
PDLIM7-207ENST00000486828 KLHL8Q9P2G9 620 aaPredicted RBP18.45■□□□□ 0.54
PDLIM7-207ENST00000486828 TIMM13Q9Y5L4 95 aaPredicted RBP18.45■□□□□ 0.54
PDLIM7-207ENST00000486828 KCNK1O00180 336 aa18.45■□□□□ 0.54
PDLIM7-207ENST00000486828 TPP1O14773 563 aa18.45■□□□□ 0.54
PDLIM7-207ENST00000486828 PEX11AO75192 247 aa18.45■□□□□ 0.54
PDLIM7-207ENST00000486828 GLRA3O75311 464 aa18.45■□□□□ 0.54
PDLIM7-207ENST00000486828 TOP3BO95985 862 aaKnown RBP18.45■□□□□ 0.54
PDLIM7-207ENST00000486828 LTFP02788 710 aa18.45■□□□□ 0.54
PDLIM7-207ENST00000486828 POLBP06746 335 aa18.45■□□□□ 0.54
PDLIM7-207ENST00000486828 USP17L7P0C7H9 530 aa18.45■□□□□ 0.54
PDLIM7-207ENST00000486828 NCAM1P13591 858 aa18.45■□□□□ 0.54
PDLIM7-207ENST00000486828 CACNA2D1P54289 1103 aa18.45■□□□□ 0.54
PDLIM7-207ENST00000486828 ARL13BQ3SXY8 428 aa18.45■□□□□ 0.54
PDLIM7-207ENST00000486828 SPANXN3Q5MJ09 141 aa18.45■□□□□ 0.54
PDLIM7-207ENST00000486828 CRLF3Q8IUI8 442 aa18.45■□□□□ 0.54
PDLIM7-207ENST00000486828 ARID3BQ8IVW6 561 aaPredicted RBP18.45■□□□□ 0.54
PDLIM7-207ENST00000486828 C3orf58Q8NDZ4 430 aa18.45■□□□□ 0.54
PDLIM7-207ENST00000486828 CADM1Q9BY67 442 aaKnown RBP18.45■□□□□ 0.54
PDLIM7-207ENST00000486828 RNPEPL1Q9HAU8 725 aa18.45■□□□□ 0.54
PDLIM7-207ENST00000486828 CHST12Q9NRB3 414 aa18.45■□□□□ 0.54
PDLIM7-207ENST00000486828 DDIT4Q9NX09 232 aa18.45■□□□□ 0.54
PDLIM7-207ENST00000486828 MIOSQ9NXC5 875 aa18.45■□□□□ 0.54
PDLIM7-207ENST00000486828 MYADML2A6NDP7 307 aa18.44■□□□□ 0.54
PDLIM7-207ENST00000486828 HHLA1C9JL84 531 aa18.44■□□□□ 0.54
PDLIM7-207ENST00000486828 AFF1P51825 1210 aaKnown RBP18.44■□□□□ 0.54
PDLIM7-207ENST00000486828 PPIDQ08752 370 aaKnown RBP18.44■□□□□ 0.54
PDLIM7-207ENST00000486828 STX3Q13277 289 aa18.44■□□□□ 0.54
PDLIM7-207ENST00000486828 CRHR2Q13324 411 aa18.44■□□□□ 0.54
PDLIM7-207ENST00000486828 HSF5Q4G112 596 aaPredicted RBP18.44■□□□□ 0.54
PDLIM7-207ENST00000486828 INTS6LQ5JSJ4 861 aaKnown RBP18.44■□□□□ 0.54
PDLIM7-207ENST00000486828 RASSF3Q86WH2 238 aa18.44■□□□□ 0.54
PDLIM7-207ENST00000486828 GIMAP7Q8NHV1 300 aa18.44■□□□□ 0.54
PDLIM7-207ENST00000486828 SH3TC2Q8TF17 1288 aa18.44■□□□□ 0.54
PDLIM7-207ENST00000486828 NSMCE1Q8WV22 266 aa18.44■□□□□ 0.54
PDLIM7-207ENST00000486828 GORASP1Q9BQQ3 440 aa18.44■□□□□ 0.54
PDLIM7-207ENST00000486828 BRD8Q9H0E9 1235 aa18.44■□□□□ 0.54
PDLIM7-207ENST00000486828 WWP1Q9H0M0 922 aa18.44■□□□□ 0.54
PDLIM7-207ENST00000486828 ZNF395Q9H8N7 513 aaPredicted RBP18.44■□□□□ 0.54
PDLIM7-207ENST00000486828 ZFYVE28Q9HCC9 887 aa18.44■□□□□ 0.54
PDLIM7-207ENST00000486828 EMCNQ9ULC0 261 aa18.44■□□□□ 0.54
PDLIM7-207ENST00000486828 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.44■□□□□ 0.54
PDLIM7-207ENST00000486828 PSAT1Q9Y617 370 aa18.44■□□□□ 0.54
PDLIM7-207ENST00000486828 CA12O43570 354 aa18.43■□□□□ 0.54
PDLIM7-207ENST00000486828 KPNA6O60684 536 aa18.43■□□□□ 0.54
PDLIM7-207ENST00000486828 AP2A1O95782 977 aa18.43■□□□□ 0.54
PDLIM7-207ENST00000486828 ALDH1A1P00352 501 aa18.43■□□□□ 0.54
PDLIM7-207ENST00000486828 GSRP00390 522 aa18.43■□□□□ 0.54
PDLIM7-207ENST00000486828 F9P00740 461 aa18.43■□□□□ 0.54
PDLIM7-207ENST00000486828 AMHP03971 560 aa18.43■□□□□ 0.54
PDLIM7-207ENST00000486828 ITGA2BP08514 1039 aa18.43■□□□□ 0.54
PDLIM7-207ENST00000486828 AKR1A1P14550 325 aa18.43■□□□□ 0.54
PDLIM7-207ENST00000486828 GM2AP17900 193 aa18.43■□□□□ 0.54
PDLIM7-207ENST00000486828 PDE1CQ14123 709 aaPredicted RBP18.43■□□□□ 0.54
PDLIM7-207ENST00000486828 BHLHA9Q7RTU4 235 aa18.43■□□□□ 0.54
PDLIM7-207ENST00000486828 TTC7BQ86TV6 843 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms