RNA–Protein interactions for RNA: ENST00000486254.3

PKP4-213, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 1,566 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-213ENST00000486254 HTTP42858 3142 aa12.3□□□□□ -0.44
PKP4-213ENST00000486254 TET1Q8NFU7 2136 aa12.29□□□□□ -0.44
PKP4-213ENST00000486254 SYNJ2BP-COX16A0A087WUM0 186 aa12.29□□□□□ -0.44
PKP4-213ENST00000486254 SDR42E2A6NKP2 422 aa12.29□□□□□ -0.44
PKP4-213ENST00000486254 F8W810 466 aa12.29□□□□□ -0.44
PKP4-213ENST00000486254 PSMD3O43242 534 aa12.29□□□□□ -0.44
PKP4-213ENST00000486254 KRT37O76014 449 aa12.29□□□□□ -0.44
PKP4-213ENST00000486254 MAP3K6O95382 1288 aa12.29□□□□□ -0.44
PKP4-213ENST00000486254 AP2A1O95782 977 aa12.29□□□□□ -0.44
PKP4-213ENST00000486254 EFEMP2O95967 443 aa12.29□□□□□ -0.44
PKP4-213ENST00000486254 OAS1P00973 400 aaKnown RBP12.29□□□□□ -0.44
PKP4-213ENST00000486254 ALDH2P05091 517 aa12.29□□□□□ -0.44
PKP4-213ENST00000486254 CREB1P16220 341 aa12.29□□□□□ -0.44
PKP4-213ENST00000486254 PTPN3P26045 913 aa12.29□□□□□ -0.44
PKP4-213ENST00000486254 EPHB2P29323 1055 aa12.29□□□□□ -0.44
PKP4-213ENST00000486254 HOXD11P31277 338 aaPredicted RBP12.29□□□□□ -0.44
PKP4-213ENST00000486254 GBP2P32456 591 aaPredicted RBP12.29□□□□□ -0.44
PKP4-213ENST00000486254 CORO7P57737 925 aa12.29□□□□□ -0.44
PKP4-213ENST00000486254 SLC18A2Q05940 514 aa12.29□□□□□ -0.44
PKP4-213ENST00000486254 AP1B1Q10567 949 aa12.29□□□□□ -0.44
PKP4-213ENST00000486254 KBTBD12Q3ZCT8 623 aa12.29□□□□□ -0.44
PKP4-213ENST00000486254 CTXN3Q4LDR2 81 aa12.29□□□□□ -0.44
PKP4-213ENST00000486254 HP1BP3Q5SSJ5 553 aaPredicted RBP12.29□□□□□ -0.44
PKP4-213ENST00000486254 ANKS3Q6ZW76 656 aa12.29□□□□□ -0.44
PKP4-213ENST00000486254 NPWQ8N729 165 aa12.29□□□□□ -0.44
PKP4-213ENST00000486254 SCAMP5Q8TAC9 235 aa12.29□□□□□ -0.44
PKP4-213ENST00000486254 ADAM32Q8TC27 787 aa12.29□□□□□ -0.44
PKP4-213ENST00000486254 TBC1D31Q96DN5 1066 aa12.29□□□□□ -0.44
PKP4-213ENST00000486254 STAMBPL1Q96FJ0 436 aa12.29□□□□□ -0.44
PKP4-213ENST00000486254 SLC39A13Q96H72 371 aa12.29□□□□□ -0.44
PKP4-213ENST00000486254 SEC16BQ96JE7 1060 aa12.29□□□□□ -0.44
PKP4-213ENST00000486254 ZMYND15Q9H091 742 aa12.29□□□□□ -0.44
PKP4-213ENST00000486254 RETREG1Q9H6L5 497 aa12.29□□□□□ -0.44
PKP4-213ENST00000486254 PLAC1Q9HBJ0 212 aa12.29□□□□□ -0.44
PKP4-213ENST00000486254 KCNK9Q9NPC2 374 aa12.29□□□□□ -0.44
PKP4-213ENST00000486254 TMPRSS4Q9NRS4 437 aa12.29□□□□□ -0.44
PKP4-213ENST00000486254 ABI2Q9NYB9 513 aaPredicted RBP12.29□□□□□ -0.44
PKP4-213ENST00000486254 MOCS1Q9NZB8 636 aa12.29□□□□□ -0.44
PKP4-213ENST00000486254 COX16Q9P0S2 106 aa12.29□□□□□ -0.44
PKP4-213ENST00000486254 SAMD15Q9P1V8 674 aa12.29□□□□□ -0.44
PKP4-213ENST00000486254 HSFX1Q9UBD0 423 aa12.29□□□□□ -0.44
PKP4-213ENST00000486254 LRFN2Q9ULH4 789 aa12.29□□□□□ -0.44
PKP4-213ENST00000486254 PRG3Q9Y2Y8 225 aaPredicted RBP12.29□□□□□ -0.44
PKP4-213ENST00000486254 TRIM17Q9Y577 477 aa12.29□□□□□ -0.44
PKP4-213ENST00000486254 DOCK4Q8N1I0 1966 aa12.28□□□□□ -0.44
PKP4-213ENST00000486254 AMHP03971 560 aa12.28□□□□□ -0.44
PKP4-213ENST00000486254 PGAM1P18669 254 aa12.28□□□□□ -0.44
PKP4-213ENST00000486254 CCNCP24863 283 aa12.28□□□□□ -0.44
PKP4-213ENST00000486254 IFNAR2P48551 515 aa12.28□□□□□ -0.44
PKP4-213ENST00000486254 IFRD2Q12894 506 aaPredicted RBP12.28□□□□□ -0.44
PKP4-213ENST00000486254 PDK4Q16654 411 aa12.28□□□□□ -0.44
PKP4-213ENST00000486254 TEX44Q53QW1 395 aa12.28□□□□□ -0.44
PKP4-213ENST00000486254 ARTNQ5T4W7 220 aa12.28□□□□□ -0.44
PKP4-213ENST00000486254 FAXCQ5TGI0 409 aa12.28□□□□□ -0.44
PKP4-213ENST00000486254 TTC39BQ5VTQ0 682 aaPredicted RBP12.28□□□□□ -0.44
PKP4-213ENST00000486254 FAM171A1Q5VUB5 890 aa12.28□□□□□ -0.44
PKP4-213ENST00000486254 AFMIDQ63HM1 303 aa12.28□□□□□ -0.44
PKP4-213ENST00000486254 KCTD11Q693B1 232 aa12.28□□□□□ -0.44
PKP4-213ENST00000486254 FUT10Q6P4F1 479 aa12.28□□□□□ -0.44
PKP4-213ENST00000486254 UNC5AQ6ZN44 842 aa12.28□□□□□ -0.44
PKP4-213ENST00000486254 DENND5BQ6ZUT9 1274 aa12.28□□□□□ -0.44
PKP4-213ENST00000486254 TAX1BP1Q86VP1 789 aa12.28□□□□□ -0.44
PKP4-213ENST00000486254 BANPQ8N9N5 519 aa12.28□□□□□ -0.44
PKP4-213ENST00000486254 CCDC197Q8NCU1 140 aa12.28□□□□□ -0.44
PKP4-213ENST00000486254 CCNYQ8ND76 341 aa12.28□□□□□ -0.44
PKP4-213ENST00000486254 UNC93B1Q9H1C4 597 aa12.28□□□□□ -0.44
PKP4-213ENST00000486254 PPARGC1AQ9UBK2 798 aaKnown RBP12.28□□□□□ -0.44
PKP4-213ENST00000486254 FAM169AQ9Y6X4 670 aa12.28□□□□□ -0.44
PKP4-213ENST00000486254 LTBP2Q14767 1821 aa12.27□□□□□ -0.44
PKP4-213ENST00000486254 GOLGA6L7A0A1B0GV03 622 aa12.27□□□□□ -0.44
PKP4-213ENST00000486254 AVILO75366 819 aa12.27□□□□□ -0.44
PKP4-213ENST00000486254 PAGE1O75459 146 aa12.27□□□□□ -0.44
PKP4-213ENST00000486254 KRT38O76015 456 aa12.27□□□□□ -0.44
PKP4-213ENST00000486254 KIAA0754O94854 1291 aa12.27□□□□□ -0.44
PKP4-213ENST00000486254 ALADP13716 330 aa12.27□□□□□ -0.44
PKP4-213ENST00000486254 PSMB4P28070 264 aa12.27□□□□□ -0.44
PKP4-213ENST00000486254 RFC2P35250 354 aa12.27□□□□□ -0.44
PKP4-213ENST00000486254 CCNFP41002 786 aa12.27□□□□□ -0.44
PKP4-213ENST00000486254 SLC11A1P49279 550 aa12.27□□□□□ -0.44
PKP4-213ENST00000486254 RABGGTBP53611 331 aa12.27□□□□□ -0.44
PKP4-213ENST00000486254 WDR4P57081 412 aaKnown RBP12.27□□□□□ -0.44
PKP4-213ENST00000486254 RPL10AP62906 217 aaKnown RBP12.27□□□□□ -0.44
PKP4-213ENST00000486254 RING1Q06587 406 aa12.27□□□□□ -0.44
PKP4-213ENST00000486254 QPCTQ16769 361 aa12.27□□□□□ -0.44
PKP4-213ENST00000486254 TIFABQ6ZNK6 161 aa12.27□□□□□ -0.44
PKP4-213ENST00000486254 SH2D5Q6ZV89 423 aa12.27□□□□□ -0.44
PKP4-213ENST00000486254 MARK2Q7KZI7 788 aaKnown RBP12.27□□□□□ -0.44
PKP4-213ENST00000486254 CCDC117Q8IWD4 279 aaPredicted RBP12.27□□□□□ -0.44
PKP4-213ENST00000486254 RNF168Q8IYW5 571 aaPredicted RBP12.27□□□□□ -0.44
PKP4-213ENST00000486254 LRRC34Q8IZ02 419 aa12.27□□□□□ -0.44
PKP4-213ENST00000486254 TAB3Q8N5C8 712 aaPredicted RBP12.27□□□□□ -0.44
PKP4-213ENST00000486254 ZSCAN18Q8TBC5 510 aaPredicted RBP12.27□□□□□ -0.44
PKP4-213ENST00000486254 CASP10Q92851 521 aa12.27□□□□□ -0.44
PKP4-213ENST00000486254 RNF34Q969K3 372 aa12.27□□□□□ -0.44
PKP4-213ENST00000486254 TEKT5Q96M29 485 aa12.27□□□□□ -0.44
PKP4-213ENST00000486254 CDK5RAP1Q96SZ6 601 aaKnown RBP12.27□□□□□ -0.44
PKP4-213ENST00000486254 TTLL2Q9BWV7 592 aa12.27□□□□□ -0.44
PKP4-213ENST00000486254 KLHL8Q9P2G9 620 aaPredicted RBP12.27□□□□□ -0.44
PKP4-213ENST00000486254 NUP205Q92621 2012 aa12.27□□□□□ -0.45
PKP4-213ENST00000486254 IGLV3-10A0A075B6K4 115 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms