RNA–Protein interactions for RNA: ENST00000486085.5

RTN4-214, Transcript of reticulon 4, humanhuman

TSL 3

Gene RTN4, Length 955 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-214ENST00000486085 AWAT1Q58HT5 328 aa6.78□□□□□ -1.32
RTN4-214ENST00000486085 TMEM63BQ5T3F8 832 aa6.78□□□□□ -1.32
RTN4-214ENST00000486085 FTSJ3Q8IY81 847 aaKnown RBP6.78□□□□□ -1.32
RTN4-214ENST00000486085 SMAP1Q8IYB5 467 aaPredicted RBP6.78□□□□□ -1.32
RTN4-214ENST00000486085 GALNT4Q8N4A0 578 aa6.78□□□□□ -1.32
RTN4-214ENST00000486085 PNLDC1Q8NA58 520 aaKnown RBP6.78□□□□□ -1.32
RTN4-214ENST00000486085 FAM98AQ8NCA5 519 aaKnown RBP6.78□□□□□ -1.32
RTN4-214ENST00000486085 OR6Y1Q8NGX8 325 aa6.78□□□□□ -1.32
RTN4-214ENST00000486085 AFG1LQ8WV93 481 aa6.78□□□□□ -1.32
RTN4-214ENST00000486085 GLMPQ8WWB7 406 aa6.78□□□□□ -1.32
RTN4-214ENST00000486085 CPT1BQ92523 772 aa6.78□□□□□ -1.32
RTN4-214ENST00000486085 AKAP1Q92667 903 aaKnown RBP eCLIP6.78□□□□□ -1.32
RTN4-214ENST00000486085 HEMK1Q9Y5R4 338 aaPredicted RBP6.78□□□□□ -1.32
RTN4-214ENST00000486085 BTBD19C9JJ37 291 aa6.77□□□□□ -1.33
RTN4-214ENST00000486085 E7EVH7 732 aa6.77□□□□□ -1.33
RTN4-214ENST00000486085 UBE2Q2LH0YL09 131 aa6.77□□□□□ -1.33
RTN4-214ENST00000486085 NKX2-8O15522 239 aa6.77□□□□□ -1.33
RTN4-214ENST00000486085 FAM155BO75949 473 aa6.77□□□□□ -1.33
RTN4-214ENST00000486085 SLC3A2P08195 630 aaKnown RBP6.77□□□□□ -1.33
RTN4-214ENST00000486085 CYP2D6P10635 497 aa6.77□□□□□ -1.33
RTN4-214ENST00000486085 MATN1P21941 496 aa6.77□□□□□ -1.33
RTN4-214ENST00000486085 SERPINA4P29622 427 aa6.77□□□□□ -1.33
RTN4-214ENST00000486085 GRK5P34947 590 aa6.77□□□□□ -1.33
RTN4-214ENST00000486085 ADD2P35612 726 aa6.77□□□□□ -1.33
RTN4-214ENST00000486085 AGTR2P50052 363 aa6.77□□□□□ -1.33
RTN4-214ENST00000486085 ELLP55199 621 aaPredicted RBP6.77□□□□□ -1.33
RTN4-214ENST00000486085 RBM6P78332 1123 aaKnown RBP6.77□□□□□ -1.33
RTN4-214ENST00000486085 RAPGEF1Q13905 1077 aa6.77□□□□□ -1.33
RTN4-214ENST00000486085 CNGA3Q16281 694 aa6.77□□□□□ -1.33
RTN4-214ENST00000486085 TMEM95Q3KNT9 176 aa6.77□□□□□ -1.33
RTN4-214ENST00000486085 CC2D1BQ5T0F9 858 aaKnown RBP6.77□□□□□ -1.33
RTN4-214ENST00000486085 ANKRD45Q5TZF3 282 aa6.77□□□□□ -1.33
RTN4-214ENST00000486085 PRAMEF17Q5VTA0 474 aa6.77□□□□□ -1.33
RTN4-214ENST00000486085 FCRLBQ6BAA4 426 aa6.77□□□□□ -1.33
RTN4-214ENST00000486085 VSTM1Q6UX27 236 aa6.77□□□□□ -1.33
RTN4-214ENST00000486085 KYAT3Q6YP21 454 aaKnown RBP6.77□□□□□ -1.33
RTN4-214ENST00000486085 CHSY1Q86X52 802 aa6.77□□□□□ -1.33
RTN4-214ENST00000486085 GOLGA1Q92805 767 aa6.77□□□□□ -1.33
RTN4-214ENST00000486085 RITA1Q96K30 269 aa6.77□□□□□ -1.33
RTN4-214ENST00000486085 GAR1Q9NY12 217 aaKnown RBP6.77□□□□□ -1.33
RTN4-214ENST00000486085 KCND3Q9UK17 655 aa6.77□□□□□ -1.33
RTN4-214ENST00000486085 RAB3GAP2Q9H2M9 1393 aa6.77□□□□□ -1.33
RTN4-214ENST00000486085 MROH2AA6NES4 1674 aa6.77□□□□□ -1.33
RTN4-214ENST00000486085 AOX1Q06278 1338 aa6.76□□□□□ -1.33
RTN4-214ENST00000486085 CNTLNQ9NXG0 1405 aa6.76□□□□□ -1.33
RTN4-214ENST00000486085 TBC1D3DA0A087WVF3 549 aa6.76□□□□□ -1.33
RTN4-214ENST00000486085 TBC1D3IA0A087WXS9 549 aa6.76□□□□□ -1.33
RTN4-214ENST00000486085 TBC1D3EA0A087X179 549 aa6.76□□□□□ -1.33
RTN4-214ENST00000486085 TBC1D3KA0A087X1G2 549 aa6.76□□□□□ -1.33
RTN4-214ENST00000486085 TBC1D3BA6NDS4 549 aa6.76□□□□□ -1.33
RTN4-214ENST00000486085 TBC1D3FA6NER0 549 aaPredicted RBP6.76□□□□□ -1.33
RTN4-214ENST00000486085 TTC34A8MYJ7 566 aa6.76□□□□□ -1.33
RTN4-214ENST00000486085 B9A039 149 aa6.76□□□□□ -1.33
RTN4-214ENST00000486085 TBC1D3LB9A6J9 549 aa6.76□□□□□ -1.33
RTN4-214ENST00000486085 TBC1D3HP0C7X1 549 aa6.76□□□□□ -1.33
RTN4-214ENST00000486085 CCT5P48643 541 aa6.76□□□□□ -1.33
RTN4-214ENST00000486085 AARSP49588 968 aaKnown RBP eCLIP6.76□□□□□ -1.33
RTN4-214ENST00000486085 VPS41P49754 854 aa6.76□□□□□ -1.33
RTN4-214ENST00000486085 SLC14A1Q13336 389 aa6.76□□□□□ -1.33
RTN4-214ENST00000486085 PROSER3Q2NL68 480 aa6.76□□□□□ -1.33
RTN4-214ENST00000486085 ADCK5Q3MIX3 580 aa6.76□□□□□ -1.33
RTN4-214ENST00000486085 C4orf46Q504U0 113 aa6.76□□□□□ -1.33
RTN4-214ENST00000486085 TBC1D3GQ6DHY5 549 aa6.76□□□□□ -1.33
RTN4-214ENST00000486085 TBC1D3CQ6IPX1 549 aa6.76□□□□□ -1.33
RTN4-214ENST00000486085 WDR93Q6P2C0 686 aa6.76□□□□□ -1.33
RTN4-214ENST00000486085 TBC1D3Q8IZP1 549 aaPredicted RBP6.76□□□□□ -1.33
RTN4-214ENST00000486085 PPM1EQ8WY54 764 aa6.76□□□□□ -1.33
RTN4-214ENST00000486085 TRMT61AQ96FX7 289 aaKnown RBP6.76□□□□□ -1.33
RTN4-214ENST00000486085 R3HDMLQ9H3Y0 253 aa6.76□□□□□ -1.33
RTN4-214ENST00000486085 NDUFAF4Q9P032 175 aa6.76□□□□□ -1.33
RTN4-214ENST00000486085 SEMA5BQ9P283 1151 aa6.76□□□□□ -1.33
RTN4-214ENST00000486085 PCDHA10Q9Y5I2 948 aa6.76□□□□□ -1.33
RTN4-214ENST00000486085 NEURL4Q96JN8 1562 aa6.76□□□□□ -1.33
RTN4-214ENST00000486085 SIGLEC1Q9BZZ2 1709 aa6.76□□□□□ -1.33
RTN4-214ENST00000486085 SPATA31A1Q5TZJ5 1347 aa6.76□□□□□ -1.33
RTN4-214ENST00000486085 SPATA31A6Q5VVP1 1343 aa6.76□□□□□ -1.33
RTN4-214ENST00000486085 TET3O43151 1660 aa6.75□□□□□ -1.33
RTN4-214ENST00000486085 PZPP20742 1482 aa6.75□□□□□ -1.33
RTN4-214ENST00000486085 AGAP5A6NIR3 686 aa6.75□□□□□ -1.33
RTN4-214ENST00000486085 HSD3B1P14060 373 aa6.75□□□□□ -1.33
RTN4-214ENST00000486085 CDK7P50613 346 aa6.75□□□□□ -1.33
RTN4-214ENST00000486085 KRTAP15-1Q3LI76 137 aa6.75□□□□□ -1.33
RTN4-214ENST00000486085 CERKLQ49MI3 558 aaPredicted RBP6.75□□□□□ -1.33
RTN4-214ENST00000486085 RANBP10Q6VN20 620 aa6.75□□□□□ -1.33
RTN4-214ENST00000486085 SYT13Q7L8C5 426 aa6.75□□□□□ -1.33
RTN4-214ENST00000486085 ANKRD18AQ8IVF6 992 aa6.75□□□□□ -1.33
RTN4-214ENST00000486085 C16orf71Q8IYS4 520 aaPredicted RBP6.75□□□□□ -1.33
RTN4-214ENST00000486085 GCC1Q96CN9 775 aa6.75□□□□□ -1.33
RTN4-214ENST00000486085 HIC2Q96JB3 615 aa6.75□□□□□ -1.33
RTN4-214ENST00000486085 ZSCAN31Q96LW9 406 aaPredicted RBP6.75□□□□□ -1.33
RTN4-214ENST00000486085 KRTAP4-7Q9BYR0 210 aa6.75□□□□□ -1.33
RTN4-214ENST00000486085 ASNSD1Q9NWL6 643 aa6.75□□□□□ -1.33
RTN4-214ENST00000486085 FEM1BQ9UK73 627 aa6.75□□□□□ -1.33
RTN4-214ENST00000486085 ABCC3O15438 1527 aa6.75□□□□□ -1.33
RTN4-214ENST00000486085 EFCAB6Q5THR3 1501 aa6.75□□□□□ -1.33
RTN4-214ENST00000486085 PROP1O75360 226 aa6.74□□□□□ -1.33
RTN4-214ENST00000486085 KAT7O95251 611 aa6.74□□□□□ -1.33
RTN4-214ENST00000486085 RXRAP19793 462 aa6.74□□□□□ -1.33
RTN4-214ENST00000486085 NDUFS1P28331 727 aa6.74□□□□□ -1.33
RTN4-214ENST00000486085 SLC8A1P32418 973 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms