RNA–Protein interactions for RNA: ENST00000486016.1

GCFC2-209, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 3

Gene GCFC2, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-209ENST00000486016 ABHD14AQ9BUJ0 271 aa4.46□□□□□ -1.7
GCFC2-209ENST00000486016 SF3B5Q9BWJ5 86 aaKnown RBP4.46□□□□□ -1.7
GCFC2-209ENST00000486016 PLK2Q9NYY3 685 aa4.46□□□□□ -1.7
GCFC2-209ENST00000486016 MAN2B2Q9Y2E5 1009 aa4.46□□□□□ -1.7
GCFC2-209ENST00000486016 UBE2J1Q9Y385 318 aaPredicted RBP4.46□□□□□ -1.7
GCFC2-209ENST00000486016 DTNAQ9Y4J8 743 aa4.46□□□□□ -1.7
GCFC2-209ENST00000486016 INSL5Q9Y5Q6 135 aa4.46□□□□□ -1.7
GCFC2-209ENST00000486016 LOC105369274A0A096LPK9 316 aa4.45□□□□□ -1.7
GCFC2-209ENST00000486016 LOC102723532A0A0G2JNH3 316 aa4.45□□□□□ -1.7
GCFC2-209ENST00000486016 DPPA5A6NC42 116 aa4.45□□□□□ -1.7
GCFC2-209ENST00000486016 GAGE12JA6NER3 117 aa4.45□□□□□ -1.7
GCFC2-209ENST00000486016 ACOT8O14734 319 aa4.45□□□□□ -1.7
GCFC2-209ENST00000486016 KLKB1P03952 638 aa4.45□□□□□ -1.7
GCFC2-209ENST00000486016 CIITAP33076 1130 aa4.45□□□□□ -1.7
GCFC2-209ENST00000486016 STT3AP46977 705 aa4.45□□□□□ -1.7
GCFC2-209ENST00000486016 NSUN2Q08J23 767 aaKnown RBP eCLIP4.45□□□□□ -1.7
GCFC2-209ENST00000486016 PARM1Q6UWI2 310 aa4.45□□□□□ -1.7
GCFC2-209ENST00000486016 SLC39A5Q6ZMH5 540 aa4.45□□□□□ -1.7
GCFC2-209ENST00000486016 KDELC2Q7Z4H8 507 aa4.45□□□□□ -1.7
GCFC2-209ENST00000486016 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.45□□□□□ -1.7
GCFC2-209ENST00000486016 DGKHQ86XP1 1220 aa4.45□□□□□ -1.7
GCFC2-209ENST00000486016 OR4N4Q8N0Y3 316 aa4.45□□□□□ -1.7
GCFC2-209ENST00000486016 PRR26Q8N8Z3 221 aa4.45□□□□□ -1.7
GCFC2-209ENST00000486016 C7orf57Q8NEG2 295 aa4.45□□□□□ -1.7
GCFC2-209ENST00000486016 SLC22A17Q8WUG5 538 aa4.45□□□□□ -1.7
GCFC2-209ENST00000486016 TTC17Q96AE7 1141 aa4.45□□□□□ -1.7
GCFC2-209ENST00000486016 PHF21BQ96EK2 531 aa4.45□□□□□ -1.7
GCFC2-209ENST00000486016 ISCUQ9H1K1 167 aa4.45□□□□□ -1.7
GCFC2-209ENST00000486016 PRDM16Q9HAZ2 1276 aa4.45□□□□□ -1.7
GCFC2-209ENST00000486016 FBXO28Q9NVF7 368 aa4.45□□□□□ -1.7
GCFC2-209ENST00000486016 MDFICQ9P1T7 246 aa4.45□□□□□ -1.7
GCFC2-209ENST00000486016 WNT16Q9UBV4 365 aa4.45□□□□□ -1.7
GCFC2-209ENST00000486016 APOL1O14791 398 aa4.44□□□□□ -1.7
GCFC2-209ENST00000486016 NEURL1O76050 574 aa4.44□□□□□ -1.7
GCFC2-209ENST00000486016 ACAA1P09110 424 aaPredicted RBP4.44□□□□□ -1.7
GCFC2-209ENST00000486016 HOXC6P09630 235 aa4.44□□□□□ -1.7
GCFC2-209ENST00000486016 RFX5P48382 616 aaPredicted RBP4.44□□□□□ -1.7
GCFC2-209ENST00000486016 NFATC4Q14934 902 aa4.44□□□□□ -1.7
GCFC2-209ENST00000486016 ATG9BQ674R7 924 aa4.44□□□□□ -1.7
GCFC2-209ENST00000486016 HMBOX1Q6NT76 420 aa4.44□□□□□ -1.7
GCFC2-209ENST00000486016 RTL10Q7L3V2 364 aa4.44□□□□□ -1.7
GCFC2-209ENST00000486016 CTU1Q7Z7A3 348 aaKnown RBP4.44□□□□□ -1.7
GCFC2-209ENST00000486016 CCDC33Q8N5R6 958 aa4.44□□□□□ -1.7
GCFC2-209ENST00000486016 MCRS1Q96EZ8 462 aa4.44□□□□□ -1.7
GCFC2-209ENST00000486016 EIF3CQ99613 913 aaKnown RBP4.44□□□□□ -1.7
GCFC2-209ENST00000486016 PLAC1Q9HBJ0 212 aa4.44□□□□□ -1.7
GCFC2-209ENST00000486016 PCDHB7Q9Y5E2 793 aa4.44□□□□□ -1.7
GCFC2-209ENST00000486016 LMTK3Q96Q04 1460 aa4.43□□□□□ -1.7
GCFC2-209ENST00000486016 FAM234BA2RU67 622 aa4.43□□□□□ -1.7
GCFC2-209ENST00000486016 BECN2A8MW95 431 aa4.43□□□□□ -1.7
GCFC2-209ENST00000486016 INAFM1C9JVW0 142 aa4.43□□□□□ -1.7
GCFC2-209ENST00000486016 J3KTA2 159 aa4.43□□□□□ -1.7
GCFC2-209ENST00000486016 NKX2-8O15522 239 aa4.43□□□□□ -1.7
GCFC2-209ENST00000486016 LCATP04180 440 aa4.43□□□□□ -1.7
GCFC2-209ENST00000486016 IDEP14735 1019 aa4.43□□□□□ -1.7
GCFC2-209ENST00000486016 FOXL2P58012 376 aa4.43□□□□□ -1.7
GCFC2-209ENST00000486016 DSCR9P59020 149 aa4.43□□□□□ -1.7
GCFC2-209ENST00000486016 SHC2P98077 582 aa4.43□□□□□ -1.7
GCFC2-209ENST00000486016 ROR2Q01974 943 aaKnown RBP4.43□□□□□ -1.7
GCFC2-209ENST00000486016 TRAF1Q13077 416 aa4.43□□□□□ -1.7
GCFC2-209ENST00000486016 CBFBQ13951 182 aa4.43□□□□□ -1.7
GCFC2-209ENST00000486016 P3H1Q32P28 736 aa4.43□□□□□ -1.7
GCFC2-209ENST00000486016 HIBCHQ6NVY1 386 aaPredicted RBP4.43□□□□□ -1.7
GCFC2-209ENST00000486016 SRFBP1Q8NEF9 429 aaKnown RBP4.43□□□□□ -1.7
GCFC2-209ENST00000486016 LMO3Q8TAP4 145 aa4.43□□□□□ -1.7
GCFC2-209ENST00000486016 LMLNQ96KR4 655 aa4.43□□□□□ -1.7
GCFC2-209ENST00000486016 EIF2AQ9BY44 585 aaKnown RBP4.43□□□□□ -1.7
GCFC2-209ENST00000486016 MAGEH1Q9H213 219 aa4.43□□□□□ -1.7
GCFC2-209ENST00000486016 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.43□□□□□ -1.7
GCFC2-209ENST00000486016 CA14Q9ULX7 337 aa4.43□□□□□ -1.7
GCFC2-209ENST00000486016 M0QYT0 321 aa4.42□□□□□ -1.7
GCFC2-209ENST00000486016 NTSR2O95665 410 aa4.42□□□□□ -1.7
GCFC2-209ENST00000486016 SRGAP2BP0DMP2 458 aa4.42□□□□□ -1.7
GCFC2-209ENST00000486016 ATF3P18847 181 aa4.42□□□□□ -1.7
GCFC2-209ENST00000486016 KRTAP10-5P60370 271 aa4.42□□□□□ -1.7
GCFC2-209ENST00000486016 ABATP80404 500 aa4.42□□□□□ -1.7
GCFC2-209ENST00000486016 CSHL1Q14406 222 aa4.42□□□□□ -1.7
GCFC2-209ENST00000486016 AAK1Q2M2I8 961 aa4.42□□□□□ -1.7
GCFC2-209ENST00000486016 WDR93Q6P2C0 686 aa4.42□□□□□ -1.7
GCFC2-209ENST00000486016 KRT27Q7Z3Y8 459 aa4.42□□□□□ -1.7
GCFC2-209ENST00000486016 MDGA2Q7Z553 956 aa4.42□□□□□ -1.7
GCFC2-209ENST00000486016 CUZD1Q86UP6 607 aa4.42□□□□□ -1.7
GCFC2-209ENST00000486016 RASGRP3Q8IV61 690 aa4.42□□□□□ -1.7
GCFC2-209ENST00000486016 DNASE2BQ8WZ79 361 aa4.42□□□□□ -1.7
GCFC2-209ENST00000486016 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.42□□□□□ -1.7
GCFC2-209ENST00000486016 HIF1ANQ9NWT6 349 aa4.42□□□□□ -1.7
GCFC2-209ENST00000486016 MYO6Q9UM54 1294 aa4.42□□□□□ -1.7
GCFC2-209ENST00000486016 KCNJ18B7U540 433 aa4.41□□□□□ -1.7
GCFC2-209ENST00000486016 PCDH17O14917 1159 aa4.41□□□□□ -1.7
GCFC2-209ENST00000486016 RGS14O43566 566 aa4.41□□□□□ -1.7
GCFC2-209ENST00000486016 NFATC1O95644 943 aa4.41□□□□□ -1.7
GCFC2-209ENST00000486016 CYP3A4P08684 503 aa4.41□□□□□ -1.7
GCFC2-209ENST00000486016 CRYZQ08257 329 aaKnown RBP4.41□□□□□ -1.7
GCFC2-209ENST00000486016 ARL13BQ3SXY8 428 aa4.41□□□□□ -1.7
GCFC2-209ENST00000486016 C9orf50Q5SZB4 431 aa4.41□□□□□ -1.7
GCFC2-209ENST00000486016 NADSYN1Q6IA69 706 aa4.41□□□□□ -1.7
GCFC2-209ENST00000486016 SLC16A12Q6ZSM3 486 aa4.41□□□□□ -1.7
GCFC2-209ENST00000486016 CYB5R4Q7L1T6 521 aa4.41□□□□□ -1.7
GCFC2-209ENST00000486016 KDM1BQ8NB78 822 aa4.41□□□□□ -1.7
GCFC2-209ENST00000486016 ENGASEQ8NFI3 743 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 145.9 ms