RNA–Protein interactions for RNA: ENST00000485102.1

HDAC6-227, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-227ENST00000485102 SLC6A4P31645 630 aa13.52□□□□□ -0.25
HDAC6-227ENST00000485102 SGSHP51688 502 aa13.52□□□□□ -0.25
HDAC6-227ENST00000485102 GALCP54803 685 aa13.52□□□□□ -0.25
HDAC6-227ENST00000485102 NNTQ13423 1086 aa13.52□□□□□ -0.25
HDAC6-227ENST00000485102 CNGA2Q16280 664 aa13.52□□□□□ -0.25
HDAC6-227ENST00000485102 UBA3Q8TBC4 463 aa13.52□□□□□ -0.25
HDAC6-227ENST00000485102 CCDC34Q96HJ3 373 aa13.52□□□□□ -0.25
HDAC6-227ENST00000485102 MRGPRX3Q96LB0 322 aa13.52□□□□□ -0.25
HDAC6-227ENST00000485102 HSFY1Q96LI6 401 aa13.52□□□□□ -0.25
HDAC6-227ENST00000485102 ELF4Q99607 663 aaPredicted RBP13.52□□□□□ -0.25
HDAC6-227ENST00000485102 DDX50Q9BQ39 737 aaKnown RBP13.52□□□□□ -0.25
HDAC6-227ENST00000485102 FBXL12Q9NXK8 326 aa13.52□□□□□ -0.25
HDAC6-227ENST00000485102 INTS6Q9UL03 887 aaKnown RBP13.52□□□□□ -0.25
HDAC6-227ENST00000485102 FZD4Q9ULV1 537 aa13.52□□□□□ -0.25
HDAC6-227ENST00000485102 ITIH6Q6UXX5 1313 aa13.51□□□□□ -0.25
HDAC6-227ENST00000485102 MSI1O43347 362 aaKnown RBP13.51□□□□□ -0.25
HDAC6-227ENST00000485102 TBL1XO60907 577 aa13.51□□□□□ -0.25
HDAC6-227ENST00000485102 ZNF202O95125 648 aa13.51□□□□□ -0.25
HDAC6-227ENST00000485102 SRPRAP08240 638 aaKnown RBP13.51□□□□□ -0.25
HDAC6-227ENST00000485102 CD19P15391 556 aa13.51□□□□□ -0.25
HDAC6-227ENST00000485102 RPL34P49207 117 aaKnown RBP13.51□□□□□ -0.25
HDAC6-227ENST00000485102 CCR5P51681 352 aa13.51□□□□□ -0.25
HDAC6-227ENST00000485102 ST8SIA6P61647 398 aa13.51□□□□□ -0.25
HDAC6-227ENST00000485102 FKBP3Q00688 224 aaKnown RBP13.51□□□□□ -0.25
HDAC6-227ENST00000485102 STILQ15468 1287 aa13.51□□□□□ -0.25
HDAC6-227ENST00000485102 C9orf64Q5T6V5 341 aa13.51□□□□□ -0.25
HDAC6-227ENST00000485102 PMF1Q6P1K2 205 aa13.51□□□□□ -0.25
HDAC6-227ENST00000485102 RFWD3Q6PCD5 774 aa13.51□□□□□ -0.25
HDAC6-227ENST00000485102 BEND5Q7L4P6 421 aa13.51□□□□□ -0.25
HDAC6-227ENST00000485102 ADAT2Q7Z6V5 191 aaKnown RBP13.51□□□□□ -0.25
HDAC6-227ENST00000485102 MFN1Q8IWA4 741 aa13.51□□□□□ -0.25
HDAC6-227ENST00000485102 CACTIN-AS1Q8N1I8 211 aa13.51□□□□□ -0.25
HDAC6-227ENST00000485102 HJURPQ8NCD3 748 aaPredicted RBP13.51□□□□□ -0.25
HDAC6-227ENST00000485102 OR2T34Q8NGX1 318 aa13.51□□□□□ -0.25
HDAC6-227ENST00000485102 SAP25Q8TEE9 199 aa13.51□□□□□ -0.25
HDAC6-227ENST00000485102 SLC39A13Q96H72 371 aa13.51□□□□□ -0.25
HDAC6-227ENST00000485102 LRIG1Q96JA1 1093 aa13.51□□□□□ -0.25
HDAC6-227ENST00000485102 BBC3Q96PG8 261 aaPredicted RBP13.51□□□□□ -0.25
HDAC6-227ENST00000485102 EBF2Q9HAK2 575 aa13.51□□□□□ -0.25
HDAC6-227ENST00000485102 FTSJ1Q9UET6 329 aa13.51□□□□□ -0.25
HDAC6-227ENST00000485102 SHROOM3Q8TF72 1996 aa13.51□□□□□ -0.25
HDAC6-227ENST00000485102 GOLGA6L7A0A1B0GV03 622 aa13.5□□□□□ -0.25
HDAC6-227ENST00000485102 A0A1W2PR77 199 aa13.5□□□□□ -0.25
HDAC6-227ENST00000485102 LRRC72A6NJI9 287 aa13.5□□□□□ -0.25
HDAC6-227ENST00000485102 SIN3BO75182 1162 aa13.5□□□□□ -0.25
HDAC6-227ENST00000485102 FBXO21O94952 628 aa13.5□□□□□ -0.25
HDAC6-227ENST00000485102 LTFP02788 710 aa13.5□□□□□ -0.25
HDAC6-227ENST00000485102 CSKP41240 450 aa13.5□□□□□ -0.25
HDAC6-227ENST00000485102 RXRGP48443 463 aa13.5□□□□□ -0.25
HDAC6-227ENST00000485102 C21orf59P57076 290 aa13.5□□□□□ -0.25
HDAC6-227ENST00000485102 TBX4P57082 545 aa13.5□□□□□ -0.25
HDAC6-227ENST00000485102 KCNJ12Q14500 433 aa13.5□□□□□ -0.25
HDAC6-227ENST00000485102 CST6Q15828 149 aa13.5□□□□□ -0.25
HDAC6-227ENST00000485102 NADSYN1Q6IA69 706 aa13.5□□□□□ -0.25
HDAC6-227ENST00000485102 NCEH1Q6PIU2 408 aa13.5□□□□□ -0.25
HDAC6-227ENST00000485102 DHRS13Q6UX07 377 aa13.5□□□□□ -0.25
HDAC6-227ENST00000485102 LAYNQ6UX15 382 aa13.5□□□□□ -0.25
HDAC6-227ENST00000485102 MARCH9Q86YJ5 346 aa13.5□□□□□ -0.25
HDAC6-227ENST00000485102 TFAP2BQ92481 460 aa13.5□□□□□ -0.25
HDAC6-227ENST00000485102 TSC1Q92574 1164 aa13.5□□□□□ -0.25
HDAC6-227ENST00000485102 SLC35C1Q96A29 364 aa13.5□□□□□ -0.25
HDAC6-227ENST00000485102 FAM131CQ96AQ9 280 aa13.5□□□□□ -0.25
HDAC6-227ENST00000485102 FCRL2Q96LA5 508 aaPredicted RBP13.5□□□□□ -0.25
HDAC6-227ENST00000485102 FAM129BQ96TA1 746 aa13.5□□□□□ -0.25
HDAC6-227ENST00000485102 NEUROG2Q9H2A3 272 aa13.5□□□□□ -0.25
HDAC6-227ENST00000485102 ERVMER34-1Q9H9K5 563 aa13.5□□□□□ -0.25
HDAC6-227ENST00000485102 TLR6Q9Y2C9 796 aa13.5□□□□□ -0.25
HDAC6-227ENST00000485102 GCN1Q92616 2671 aaKnown RBP13.5□□□□□ -0.25
HDAC6-227ENST00000485102 FLNBO75369 2602 aaKnown RBP13.49□□□□□ -0.25
HDAC6-227ENST00000485102 TP53BP1Q12888 1972 aaPredicted RBP13.49□□□□□ -0.25
HDAC6-227ENST00000485102 PLXNA2O75051 1894 aa13.49□□□□□ -0.25
HDAC6-227ENST00000485102 TYW5A2RUC4 315 aaKnown RBP13.49□□□□□ -0.25
HDAC6-227ENST00000485102 FAM149AA5PLN7 773 aa13.49□□□□□ -0.25
HDAC6-227ENST00000485102 GOLGA6L4A6NEF3 574 aa13.49□□□□□ -0.25
HDAC6-227ENST00000485102 GOLGA8CPA6NN73 597 aa13.49□□□□□ -0.25
HDAC6-227ENST00000485102 GOLGA6L22H0YM25 854 aa13.49□□□□□ -0.25
HDAC6-227ENST00000485102 ENC1O14682 589 aa13.49□□□□□ -0.25
HDAC6-227ENST00000485102 WNT1P04628 370 aa13.49□□□□□ -0.25
HDAC6-227ENST00000485102 FYNP06241 537 aa13.49□□□□□ -0.25
HDAC6-227ENST00000485102 LCP1P13796 627 aa13.49□□□□□ -0.25
HDAC6-227ENST00000485102 CD38P28907 300 aa13.49□□□□□ -0.25
HDAC6-227ENST00000485102 PRCPP42785 496 aa13.49□□□□□ -0.25
HDAC6-227ENST00000485102 SHBQ15464 509 aa13.49□□□□□ -0.25
HDAC6-227ENST00000485102 MS4A13Q5J8X5 152 aa13.49□□□□□ -0.25
HDAC6-227ENST00000485102 TCERG1LQ5VWI1 586 aa13.49□□□□□ -0.25
HDAC6-227ENST00000485102 PRICKLE1Q96MT3 831 aaPredicted RBP13.49□□□□□ -0.25
HDAC6-227ENST00000485102 SLC6A18Q96N87 628 aa13.49□□□□□ -0.25
HDAC6-227ENST00000485102 SERPINB11Q96P15 392 aa13.49□□□□□ -0.25
HDAC6-227ENST00000485102 GBP4Q96PP9 640 aa13.49□□□□□ -0.25
HDAC6-227ENST00000485102 GTPBP4Q9BZE4 634 aaKnown RBP13.49□□□□□ -0.25
HDAC6-227ENST00000485102 MTG2Q9H4K7 406 aa13.49□□□□□ -0.25
HDAC6-227ENST00000485102 SERGEFQ9UGK8 458 aa13.49□□□□□ -0.25
HDAC6-227ENST00000485102 ARMCX3Q9UH62 379 aaPredicted RBP13.49□□□□□ -0.25
HDAC6-227ENST00000485102 ERVW-1Q9UQF0 538 aa13.49□□□□□ -0.25
HDAC6-227ENST00000485102 ZDHHC9Q9Y397 364 aa13.49□□□□□ -0.25
HDAC6-227ENST00000485102 EDDM13A0A1B0GTR0 161 aa13.48□□□□□ -0.25
HDAC6-227ENST00000485102 A0A1W2PP55 124 aa13.48□□□□□ -0.25
HDAC6-227ENST00000485102 TK2O00142 265 aa13.48□□□□□ -0.25
HDAC6-227ENST00000485102 MID1O15344 667 aa13.48□□□□□ -0.25
HDAC6-227ENST00000485102 SART1O43290 800 aaKnown RBP13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms