RNA–Protein interactions for RNA: ENST00000485055.5

CCDC39-205, Transcript of coiled-coil domain containing 39, humanhuman

TSL 1 (best)

Gene CCDC39, Length 2,874 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-205ENST00000485055 TRIP11Q15643 1979 aa5.53□□□□□ -1.52
CCDC39-205ENST00000485055 CTAGE9A4FU28 777 aa5.53□□□□□ -1.52
CCDC39-205ENST00000485055 WNT7AO00755 349 aa5.53□□□□□ -1.52
CCDC39-205ENST00000485055 MED24O75448 989 aa5.53□□□□□ -1.52
CCDC39-205ENST00000485055 DDHD2O94830 711 aa5.53□□□□□ -1.52
CCDC39-205ENST00000485055 STAMBPO95630 424 aa5.53□□□□□ -1.52
CCDC39-205ENST00000485055 TP53P04637 393 aaPredicted RBP5.53□□□□□ -1.52
CCDC39-205ENST00000485055 LONP1P36776 959 aaKnown RBP5.53□□□□□ -1.52
CCDC39-205ENST00000485055 HSD17B2P37059 387 aa5.53□□□□□ -1.52
CCDC39-205ENST00000485055 KRT85P78386 507 aa5.53□□□□□ -1.52
CCDC39-205ENST00000485055 PTK2BQ14289 1009 aa5.53□□□□□ -1.52
CCDC39-205ENST00000485055 SYCP1Q15431 976 aa5.53□□□□□ -1.52
CCDC39-205ENST00000485055 ADIPOQQ15848 244 aa5.53□□□□□ -1.52
CCDC39-205ENST00000485055 ZBTB6Q15916 424 aa5.53□□□□□ -1.52
CCDC39-205ENST00000485055 KBTBD12Q3ZCT8 623 aa5.53□□□□□ -1.52
CCDC39-205ENST00000485055 KRBOX4Q5JUW0 171 aa5.53□□□□□ -1.52
CCDC39-205ENST00000485055 CD300LGQ6UXG3 332 aa5.53□□□□□ -1.52
CCDC39-205ENST00000485055 AGR3Q8TD06 166 aa5.53□□□□□ -1.52
CCDC39-205ENST00000485055 ATP2A3Q93084 1043 aa5.53□□□□□ -1.52
CCDC39-205ENST00000485055 OSBPL6Q9BZF3 934 aa5.53□□□□□ -1.52
CCDC39-205ENST00000485055 PDZD7Q9H5P4 517 aa5.53□□□□□ -1.52
CCDC39-205ENST00000485055 CD320Q9NPF0 282 aa5.53□□□□□ -1.52
CCDC39-205ENST00000485055 SLC2A4RGQ9NR83 387 aa5.53□□□□□ -1.52
CCDC39-205ENST00000485055 SUSD2Q9UGT4 822 aa5.53□□□□□ -1.52
CCDC39-205ENST00000485055 FAM153AQ9UHL3 310 aa5.53□□□□□ -1.52
CCDC39-205ENST00000485055 USP15Q9Y4E8 981 aaPredicted RBP5.53□□□□□ -1.52
CCDC39-205ENST00000485055 PTPRDP23468 1912 aa5.53□□□□□ -1.52
CCDC39-205ENST00000485055 A0A0B4J269 797 aa5.53□□□□□ -1.52
CCDC39-205ENST00000485055 A0A0U1RQK1 487 aa5.53□□□□□ -1.52
CCDC39-205ENST00000485055 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.53□□□□□ -1.52
CCDC39-205ENST00000485055 FRMD3A2A2Y4 597 aa5.53□□□□□ -1.52
CCDC39-205ENST00000485055 ZNF320A2RRD8 509 aa5.53□□□□□ -1.52
CCDC39-205ENST00000485055 F5H0A9 414 aaPredicted RBP5.53□□□□□ -1.52
CCDC39-205ENST00000485055 F8VZ95 297 aa5.53□□□□□ -1.52
CCDC39-205ENST00000485055 ST18O60284 1047 aa5.53□□□□□ -1.52
CCDC39-205ENST00000485055 ZNF254O75437 659 aa5.53□□□□□ -1.52
CCDC39-205ENST00000485055 HEXBP07686 556 aa5.53□□□□□ -1.52
CCDC39-205ENST00000485055 ITGA4P13612 1032 aa5.53□□□□□ -1.52
CCDC39-205ENST00000485055 ALOX15P16050 662 aaPredicted RBP5.53□□□□□ -1.52
CCDC39-205ENST00000485055 ARF4P18085 180 aaPredicted RBP5.53□□□□□ -1.52
CCDC39-205ENST00000485055 PDCP20941 246 aa5.53□□□□□ -1.52
CCDC39-205ENST00000485055 KELP23276 732 aa5.53□□□□□ -1.52
CCDC39-205ENST00000485055 LRPAP1P30533 357 aa5.53□□□□□ -1.52
CCDC39-205ENST00000485055 SLC11A1P49279 550 aa5.53□□□□□ -1.52
CCDC39-205ENST00000485055 DIO1P49895 249 aa5.53□□□□□ -1.52
CCDC39-205ENST00000485055 EPHA5P54756 1037 aa5.53□□□□□ -1.52
CCDC39-205ENST00000485055 ARF3P61204 181 aaPredicted RBP5.53□□□□□ -1.52
CCDC39-205ENST00000485055 SNRPFP62306 86 aaKnown RBP5.53□□□□□ -1.52
CCDC39-205ENST00000485055 RBP5P82980 135 aa5.53□□□□□ -1.52
CCDC39-205ENST00000485055 ARF1P84077 181 aaKnown RBP5.53□□□□□ -1.52
CCDC39-205ENST00000485055 SIGLEC14Q08ET2 396 aa5.53□□□□□ -1.52
CCDC39-205ENST00000485055 CUL2Q13617 745 aa5.53□□□□□ -1.52
CCDC39-205ENST00000485055 AUHQ13825 339 aaKnown RBP5.53□□□□□ -1.52
CCDC39-205ENST00000485055 GEN1Q17RS7 908 aa5.53□□□□□ -1.52
CCDC39-205ENST00000485055 XKR9Q5GH70 373 aa5.53□□□□□ -1.52
CCDC39-205ENST00000485055 INTS6LQ5JSJ4 861 aaKnown RBP5.53□□□□□ -1.52
CCDC39-205ENST00000485055 SPDYCQ5MJ68 293 aa5.53□□□□□ -1.52
CCDC39-205ENST00000485055 ZNF295-AS1Q8N0V1 137 aa5.53□□□□□ -1.52
CCDC39-205ENST00000485055 METTL13Q8N6R0 699 aa5.53□□□□□ -1.52
CCDC39-205ENST00000485055 FBXO15Q8NCQ5 510 aaPredicted RBP5.53□□□□□ -1.52
CCDC39-205ENST00000485055 ADAMTS15Q8TE58 950 aa5.53□□□□□ -1.52
CCDC39-205ENST00000485055 NOX5Q96PH1 765 aa5.53□□□□□ -1.52
CCDC39-205ENST00000485055 TCF12Q99081 682 aa5.53□□□□□ -1.52
CCDC39-205ENST00000485055 TLE6Q9H808 572 aa5.53□□□□□ -1.52
CCDC39-205ENST00000485055 TMEM165Q9HC07 324 aa5.53□□□□□ -1.52
CCDC39-205ENST00000485055 PKD2L1Q9P0L9 805 aa5.53□□□□□ -1.52
CCDC39-205ENST00000485055 IGSF9Q9P2J2 1179 aa5.53□□□□□ -1.52
CCDC39-205ENST00000485055 CHORDC1Q9UHD1 332 aaPredicted RBP5.53□□□□□ -1.52
CCDC39-205ENST00000485055 SAMM50Q9Y512 469 aa5.53□□□□□ -1.52
CCDC39-205ENST00000485055 GREB1Q4ZG55 1949 aa5.52□□□□□ -1.53
CCDC39-205ENST00000485055 ARL5CA6NH57 179 aa5.52□□□□□ -1.53
CCDC39-205ENST00000485055 SYN3O14994 580 aa5.52□□□□□ -1.53
CCDC39-205ENST00000485055 FAM189A1O60320 539 aa5.52□□□□□ -1.53
CCDC39-205ENST00000485055 KINO60870 393 aaKnown RBP5.52□□□□□ -1.53
CCDC39-205ENST00000485055 IL9P15248 144 aa5.52□□□□□ -1.53
CCDC39-205ENST00000485055 TXLNAP40222 546 aa5.52□□□□□ -1.53
CCDC39-205ENST00000485055 ALDH7A1P49419 539 aaKnown RBP5.52□□□□□ -1.53
CCDC39-205ENST00000485055 SP4Q02446 784 aa5.52□□□□□ -1.53
CCDC39-205ENST00000485055 TFF2Q03403 129 aa5.52□□□□□ -1.53
CCDC39-205ENST00000485055 BNIP1Q12981 228 aa5.52□□□□□ -1.53
CCDC39-205ENST00000485055 TUSC3Q13454 348 aa5.52□□□□□ -1.53
CCDC39-205ENST00000485055 IL17AQ16552 155 aa5.52□□□□□ -1.53
CCDC39-205ENST00000485055 CLEC16AQ2KHT3 1053 aa5.52□□□□□ -1.53
CCDC39-205ENST00000485055 SPRED3Q2MJR0 410 aa5.52□□□□□ -1.53
CCDC39-205ENST00000485055 NT5DC1Q5TFE4 455 aa5.52□□□□□ -1.53
CCDC39-205ENST00000485055 FYB2Q5VWT5 728 aa5.52□□□□□ -1.53
CCDC39-205ENST00000485055 CAVIN1Q6NZI2 390 aaKnown RBP5.52□□□□□ -1.53
CCDC39-205ENST00000485055 TMEM154Q6P9G4 183 aa5.52□□□□□ -1.53
CCDC39-205ENST00000485055 ANGPTL8Q6UXH0 198 aa5.52□□□□□ -1.53
CCDC39-205ENST00000485055 ZNF574Q6ZN55 896 aaPredicted RBP5.52□□□□□ -1.53
CCDC39-205ENST00000485055 SLFN11Q7Z7L1 901 aa5.52□□□□□ -1.53
CCDC39-205ENST00000485055 TMEM110Q86TL2 294 aa5.52□□□□□ -1.53
CCDC39-205ENST00000485055 RHPN2Q8IUC4 686 aa5.52□□□□□ -1.53
CCDC39-205ENST00000485055 DAW1Q8N136 415 aa5.52□□□□□ -1.53
CCDC39-205ENST00000485055 SPERTQ8NA61 448 aa5.52□□□□□ -1.53
CCDC39-205ENST00000485055 RFWD2Q8NHY2 731 aa5.52□□□□□ -1.53
CCDC39-205ENST00000485055 BCL7CQ8WUZ0 217 aaPredicted RBP5.52□□□□□ -1.53
CCDC39-205ENST00000485055 BSNDQ8WZ55 320 aa5.52□□□□□ -1.53
CCDC39-205ENST00000485055 HSPH1Q92598 858 aa5.52□□□□□ -1.53
CCDC39-205ENST00000485055 GAL3ST3Q96A11 431 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms