RNA–Protein interactions for RNA: ENST00000484309.5

MSH5-216, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-216ENST00000484309 IRAK1P51617 712 aa12.7□□□□□ -0.38
MSH5-216ENST00000484309 ATXN1P54253 815 aaKnown RBP12.7□□□□□ -0.38
MSH5-216ENST00000484309 LMNB2Q03252 620 aa12.7□□□□□ -0.38
MSH5-216ENST00000484309 ENPP2Q13822 863 aa12.7□□□□□ -0.38
MSH5-216ENST00000484309 IQCB1Q15051 598 aa12.7□□□□□ -0.38
MSH5-216ENST00000484309 PTPRNQ16849 979 aa12.7□□□□□ -0.38
MSH5-216ENST00000484309 MPP7Q5T2T1 576 aa12.7□□□□□ -0.38
MSH5-216ENST00000484309 CYP2U1Q7Z449 544 aa12.7□□□□□ -0.38
MSH5-216ENST00000484309 KIAA0907Q7Z7F0 614 aaPredicted RBP12.7□□□□□ -0.38
MSH5-216ENST00000484309 CCDC117Q8IWD4 279 aaPredicted RBP12.7□□□□□ -0.38
MSH5-216ENST00000484309 EMC1Q8N766 993 aa12.7□□□□□ -0.38
MSH5-216ENST00000484309 MSANTD4Q8NCY6 345 aa12.7□□□□□ -0.38
MSH5-216ENST00000484309 FIBINQ8TAL6 211 aa12.7□□□□□ -0.38
MSH5-216ENST00000484309 LMLNQ96KR4 655 aa12.7□□□□□ -0.38
MSH5-216ENST00000484309 PRMT1Q99873 361 aaKnown RBP12.7□□□□□ -0.38
MSH5-216ENST00000484309 MKRN2Q9H000 416 aaKnown RBP12.7□□□□□ -0.38
MSH5-216ENST00000484309 SIK2Q9H0K1 926 aa12.7□□□□□ -0.38
MSH5-216ENST00000484309 MTG2Q9H4K7 406 aa12.7□□□□□ -0.38
MSH5-216ENST00000484309 ANLNQ9NQW6 1124 aa12.7□□□□□ -0.38
MSH5-216ENST00000484309 TMPRSS4Q9NRS4 437 aa12.7□□□□□ -0.38
MSH5-216ENST00000484309 RXFP3Q9NSD7 469 aa12.7□□□□□ -0.38
MSH5-216ENST00000484309 SLC12A6Q9UHW9 1150 aa12.7□□□□□ -0.38
MSH5-216ENST00000484309 INTS6Q9UL03 887 aaKnown RBP12.7□□□□□ -0.38
MSH5-216ENST00000484309 VANGL2Q9ULK5 521 aa12.7□□□□□ -0.38
MSH5-216ENST00000484309 STAP1Q9ULZ2 295 aa12.7□□□□□ -0.38
MSH5-216ENST00000484309 DAAM1Q9Y4D1 1078 aa12.7□□□□□ -0.38
MSH5-216ENST00000484309 HS3ST4Q9Y661 456 aa12.7□□□□□ -0.38
MSH5-216ENST00000484309 SPTBN2O15020 2390 aa12.69□□□□□ -0.38
MSH5-216ENST00000484309 IGHV1OR15-9A0A0B4J2B8 117 aa12.69□□□□□ -0.38
MSH5-216ENST00000484309 BCLAF3A2AJT9 711 aaKnown RBP12.69□□□□□ -0.38
MSH5-216ENST00000484309 PATE3B3GLJ2 98 aa12.69□□□□□ -0.38
MSH5-216ENST00000484309 NPC1O15118 1278 aa12.69□□□□□ -0.38
MSH5-216ENST00000484309 TIMM44O43615 452 aa12.69□□□□□ -0.38
MSH5-216ENST00000484309 SLC2A3P11169 496 aa12.69□□□□□ -0.38
MSH5-216ENST00000484309 CSKP41240 450 aa12.69□□□□□ -0.38
MSH5-216ENST00000484309 CTSOP43234 321 aaPredicted RBP12.69□□□□□ -0.38
MSH5-216ENST00000484309 RPL6Q02878 288 aaKnown RBP12.69□□□□□ -0.38
MSH5-216ENST00000484309 DEUP1Q05D60 604 aa12.69□□□□□ -0.38
MSH5-216ENST00000484309 AASDHQ4L235 1098 aaPredicted RBP12.69□□□□□ -0.38
MSH5-216ENST00000484309 RAB6CQ53S08 254 aa12.69□□□□□ -0.38
MSH5-216ENST00000484309 PITRM1Q5JRX3 1037 aa12.69□□□□□ -0.38
MSH5-216ENST00000484309 PLA2G2CQ5R387 149 aa12.69□□□□□ -0.38
MSH5-216ENST00000484309 FBXL22Q6P050 247 aa12.69□□□□□ -0.38
MSH5-216ENST00000484309 LPCAT2Q7L5N7 544 aa12.69□□□□□ -0.38
MSH5-216ENST00000484309 C14orf80Q86SX3 495 aa12.69□□□□□ -0.38
MSH5-216ENST00000484309 LUZP1Q86V48 1076 aa12.69□□□□□ -0.38
MSH5-216ENST00000484309 C11orf74Q86VG3 221 aa12.69□□□□□ -0.38
MSH5-216ENST00000484309 APCDD1Q8J025 514 aa12.69□□□□□ -0.38
MSH5-216ENST00000484309 CCAR2Q8N163 923 aaKnown RBP12.69□□□□□ -0.38
MSH5-216ENST00000484309 C12orf50Q8NA57 414 aaPredicted RBP12.69□□□□□ -0.38
MSH5-216ENST00000484309 PIGKQ92643 395 aa12.69□□□□□ -0.38
MSH5-216ENST00000484309 IGSF8Q969P0 613 aa12.69□□□□□ -0.38
MSH5-216ENST00000484309 CFAP57Q96MR6 1250 aa12.69□□□□□ -0.38
MSH5-216ENST00000484309 NAP1L5Q96NT1 182 aaPredicted RBP12.69□□□□□ -0.38
MSH5-216ENST00000484309 RPRD1AQ96P16 312 aaPredicted RBP12.69□□□□□ -0.38
MSH5-216ENST00000484309 IRX2Q9BZI1 471 aaPredicted RBP12.69□□□□□ -0.38
MSH5-216ENST00000484309 TKTL2Q9H0I9 626 aa12.69□□□□□ -0.38
MSH5-216ENST00000484309 RAB6CQ9H0N0 254 aa12.69□□□□□ -0.38
MSH5-216ENST00000484309 PRDM16Q9HAZ2 1276 aa12.69□□□□□ -0.38
MSH5-216ENST00000484309 CBX8Q9HC52 389 aa12.69□□□□□ -0.38
MSH5-216ENST00000484309 RTN4Q9NQC3 1192 aaKnown RBP12.69□□□□□ -0.38
MSH5-216ENST00000484309 CDV3Q9UKY7 258 aaKnown RBP12.69□□□□□ -0.38
MSH5-216ENST00000484309 PLA2G4CQ9UP65 541 aa12.69□□□□□ -0.38
MSH5-216ENST00000484309 I6L893 689 aaPredicted RBP12.68□□□□□ -0.38
MSH5-216ENST00000484309 CAVIN2O95810 425 aa12.68□□□□□ -0.38
MSH5-216ENST00000484309 ATP5BP06576 529 aaKnown RBP12.68□□□□□ -0.38
MSH5-216ENST00000484309 DLDP09622 509 aaKnown RBP12.68□□□□□ -0.38
MSH5-216ENST00000484309 ZNF806P0C7X5 589 aa12.68□□□□□ -0.38
MSH5-216ENST00000484309 PDGFRAP16234 1089 aa12.68□□□□□ -0.38
MSH5-216ENST00000484309 MMP8P22894 467 aa12.68□□□□□ -0.38
MSH5-216ENST00000484309 SCNN1AP37088 669 aa12.68□□□□□ -0.38
MSH5-216ENST00000484309 NSFP46459 744 aaKnown RBP12.68□□□□□ -0.38
MSH5-216ENST00000484309 CXCR3P49682 368 aa12.68□□□□□ -0.38
MSH5-216ENST00000484309 COPAP53621 1224 aa12.68□□□□□ -0.38
MSH5-216ENST00000484309 ATP11AP98196 1134 aa12.68□□□□□ -0.38
MSH5-216ENST00000484309 AUHQ13825 339 aaKnown RBP12.68□□□□□ -0.38
MSH5-216ENST00000484309 BYSLQ13895 437 aaKnown RBP12.68□□□□□ -0.38
MSH5-216ENST00000484309 CDO1Q16878 200 aa12.68□□□□□ -0.38
MSH5-216ENST00000484309 CLEC16AQ2KHT3 1053 aa12.68□□□□□ -0.38
MSH5-216ENST00000484309 FILIP1LQ4L180 1135 aa12.68□□□□□ -0.38
MSH5-216ENST00000484309 RABGAP1LQ5R372 815 aa12.68□□□□□ -0.38
MSH5-216ENST00000484309 SND1Q7KZF4 910 aaKnown RBP eCLIP12.68□□□□□ -0.38
MSH5-216ENST00000484309 TMPRSS6Q8IU80 811 aa12.68□□□□□ -0.38
MSH5-216ENST00000484309 JOSD2Q8TAC2 188 aa12.68□□□□□ -0.38
MSH5-216ENST00000484309 AGPAT1Q99943 283 aa12.68□□□□□ -0.38
MSH5-216ENST00000484309 TMEM245Q9H330 911 aa12.68□□□□□ -0.38
MSH5-216ENST00000484309 WDCPQ9H6R7 721 aa12.68□□□□□ -0.38
MSH5-216ENST00000484309 VPS45Q9NRW7 570 aa12.68□□□□□ -0.38
MSH5-216ENST00000484309 RRN3Q9NYV6 651 aa12.68□□□□□ -0.38
MSH5-216ENST00000484309 TMEM59LQ9UK28 342 aa12.68□□□□□ -0.38
MSH5-216ENST00000484309 PCDHGA5Q9Y5G8 931 aa12.68□□□□□ -0.38
MSH5-216ENST00000484309 PLXNA2O75051 1894 aa12.68□□□□□ -0.38
MSH5-216ENST00000484309 DOCK9Q9BZ29 2069 aa12.67□□□□□ -0.38
MSH5-216ENST00000484309 A0A1B0GVM2 712 aa12.67□□□□□ -0.38
MSH5-216ENST00000484309 TCAF2A6NFQ2 919 aa12.67□□□□□ -0.38
MSH5-216ENST00000484309 LRRC53A6NM62 1247 aa12.67□□□□□ -0.38
MSH5-216ENST00000484309 PRR5-ARHGAP8B1AHC4 643 aa12.67□□□□□ -0.38
MSH5-216ENST00000484309 ZNF217O75362 1048 aa12.67□□□□□ -0.38
MSH5-216ENST00000484309 SERPINC1P01008 464 aa12.67□□□□□ -0.38
MSH5-216ENST00000484309 UNGP13051 313 aaPredicted RBP12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms