RNA–Protein interactions for RNA: ENST00000484252.5

LIMS2-215, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 2,099 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-215ENST00000484252 HES2Q9Y543 173 aa20.21■□□□□ 0.83
LIMS2-215ENST00000484252 NR2E3Q9Y5X4 410 aa20.21■□□□□ 0.83
LIMS2-215ENST00000484252 RAD54BQ9Y620 910 aa20.21■□□□□ 0.83
LIMS2-215ENST00000484252 TRIP11Q15643 1979 aa20.21■□□□□ 0.83
LIMS2-215ENST00000484252 EME2A4GXA9 379 aaPredicted RBP20.2■□□□□ 0.82
LIMS2-215ENST00000484252 ALOX15P16050 662 aaPredicted RBP20.2■□□□□ 0.82
LIMS2-215ENST00000484252 PSMB4P28070 264 aa20.2■□□□□ 0.82
LIMS2-215ENST00000484252 TAF6P49848 677 aa20.2■□□□□ 0.82
LIMS2-215ENST00000484252 CDK7P50613 346 aa20.2■□□□□ 0.82
LIMS2-215ENST00000484252 SNAPC2Q13487 334 aa20.2■□□□□ 0.82
LIMS2-215ENST00000484252 UBAP2LQ14157 1087 aaKnown RBP20.2■□□□□ 0.82
LIMS2-215ENST00000484252 FRG1Q14331 258 aaKnown RBP20.2■□□□□ 0.82
LIMS2-215ENST00000484252 CCDC153Q494R4 210 aa20.2■□□□□ 0.82
LIMS2-215ENST00000484252 FAM149B1Q96BN6 582 aa20.2■□□□□ 0.82
LIMS2-215ENST00000484252 PGBD4Q96DM1 585 aa20.2■□□□□ 0.82
LIMS2-215ENST00000484252 PANX3Q96QZ0 392 aa20.2■□□□□ 0.82
LIMS2-215ENST00000484252 NPY6RQ99463 290 aa20.2■□□□□ 0.82
LIMS2-215ENST00000484252 ZNF184Q99676 751 aaPredicted RBP20.2■□□□□ 0.82
LIMS2-215ENST00000484252 HNRNPABQ99729 332 aaKnown RBP20.2■□□□□ 0.82
LIMS2-215ENST00000484252 NXF3Q9H4D5 531 aaKnown RBP20.2■□□□□ 0.82
LIMS2-215ENST00000484252 SLC7A8Q9UHI5 535 aa20.2■□□□□ 0.82
LIMS2-215ENST00000484252 KAT6AQ92794 2004 aa20.2■□□□□ 0.82
LIMS2-215ENST00000484252 DPPA5A6NC42 116 aa20.2■□□□□ 0.82
LIMS2-215ENST00000484252 FKBP6O75344 327 aa20.2■□□□□ 0.82
LIMS2-215ENST00000484252 LYPLA1O75608 230 aaPredicted RBP20.2■□□□□ 0.82
LIMS2-215ENST00000484252 ANPEPP15144 967 aa20.2■□□□□ 0.82
LIMS2-215ENST00000484252 DUSP28Q4G0W2 176 aa20.2■□□□□ 0.82
LIMS2-215ENST00000484252 TMCO4Q5TGY1 634 aa20.2■□□□□ 0.82
LIMS2-215ENST00000484252 TMEM154Q6P9G4 183 aa20.2■□□□□ 0.82
LIMS2-215ENST00000484252 SLC30A9Q6PML9 568 aa20.2■□□□□ 0.82
LIMS2-215ENST00000484252 PDZD4Q76G19 769 aaPredicted RBP20.2■□□□□ 0.82
LIMS2-215ENST00000484252 PIGZQ86VD9 579 aa20.2■□□□□ 0.82
LIMS2-215ENST00000484252 ZNF567Q8N184 647 aa20.2■□□□□ 0.82
LIMS2-215ENST00000484252 CCNYQ8ND76 341 aa20.2■□□□□ 0.82
LIMS2-215ENST00000484252 ISL2Q96A47 359 aa20.2■□□□□ 0.82
LIMS2-215ENST00000484252 CERS2Q96G23 380 aa20.2■□□□□ 0.82
LIMS2-215ENST00000484252 DUSP16Q9BY84 665 aa20.2■□□□□ 0.82
LIMS2-215ENST00000484252 SLC17A6Q9P2U8 582 aa20.2■□□□□ 0.82
LIMS2-215ENST00000484252 COPG2Q9UBF2 871 aa20.2■□□□□ 0.82
LIMS2-215ENST00000484252 GINS2Q9Y248 185 aa20.2■□□□□ 0.82
LIMS2-215ENST00000484252 SMIM28A0A1B0GU29 152 aa20.19■□□□□ 0.82
LIMS2-215ENST00000484252 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.19■□□□□ 0.82
LIMS2-215ENST00000484252 F5H423 210 aaPredicted RBP20.19■□□□□ 0.82
LIMS2-215ENST00000484252 SPTLC1O15269 473 aa20.19■□□□□ 0.82
LIMS2-215ENST00000484252 STRNO43815 780 aa20.19■□□□□ 0.82
LIMS2-215ENST00000484252 KCNE1P15382 129 aa20.19■□□□□ 0.82
LIMS2-215ENST00000484252 KCNA4P22459 653 aa20.19■□□□□ 0.82
LIMS2-215ENST00000484252 TYK2P29597 1187 aa20.19■□□□□ 0.82
LIMS2-215ENST00000484252 CPOXP36551 454 aa20.19■□□□□ 0.82
LIMS2-215ENST00000484252 HARS2P49590 506 aaKnown RBP20.19■□□□□ 0.82
LIMS2-215ENST00000484252 AIF1P55008 147 aa20.19■□□□□ 0.82
LIMS2-215ENST00000484252 ADIGQ0VDE8 80 aa20.19■□□□□ 0.82
LIMS2-215ENST00000484252 DPYSQ14117 519 aa20.19■□□□□ 0.82
LIMS2-215ENST00000484252 DCAF6Q58WW2 860 aa20.19■□□□□ 0.82
LIMS2-215ENST00000484252 OTUD1Q5VV17 481 aaPredicted RBP20.19■□□□□ 0.82
LIMS2-215ENST00000484252 C1orf146Q5VVC0 180 aa20.19■□□□□ 0.82
LIMS2-215ENST00000484252 AAGABQ6PD74 315 aa20.19■□□□□ 0.82
LIMS2-215ENST00000484252 MFN1Q8IWA4 741 aa20.19■□□□□ 0.82
LIMS2-215ENST00000484252 OR6J1Q8NGC5 347 aa20.19■□□□□ 0.82
LIMS2-215ENST00000484252 KCTD13Q8WZ19 329 aa20.19■□□□□ 0.82
LIMS2-215ENST00000484252 FAM49AQ9H0Q0 323 aaPredicted RBP20.19■□□□□ 0.82
LIMS2-215ENST00000484252 PRDM12Q9H4Q4 367 aa20.19■□□□□ 0.82
LIMS2-215ENST00000484252 LRRC40Q9H9A6 602 aa20.19■□□□□ 0.82
LIMS2-215ENST00000484252 SETD4Q9NVD3 440 aa20.19■□□□□ 0.82
LIMS2-215ENST00000484252 SEPT10Q9P0V9 454 aa20.19■□□□□ 0.82
LIMS2-215ENST00000484252 PSAT1Q9Y617 370 aa20.19■□□□□ 0.82
LIMS2-215ENST00000484252 WASF2Q9Y6W5 498 aa20.19■□□□□ 0.82
LIMS2-215ENST00000484252 ENO4A6NNW6 628 aa20.18■□□□□ 0.82
LIMS2-215ENST00000484252 HUS1O60921 280 aa20.18■□□□□ 0.82
LIMS2-215ENST00000484252 SNAI1O95863 264 aaPredicted RBP20.18■□□□□ 0.82
LIMS2-215ENST00000484252 DARSP14868 501 aaKnown RBP20.18■□□□□ 0.82
LIMS2-215ENST00000484252 WARSP23381 471 aaKnown RBP20.18■□□□□ 0.82
LIMS2-215ENST00000484252 MAGEA12P43365 314 aa20.18■□□□□ 0.82
LIMS2-215ENST00000484252 ABCE1P61221 599 aaKnown RBP20.18■□□□□ 0.82
LIMS2-215ENST00000484252 HIC1Q14526 733 aa20.18■□□□□ 0.82
LIMS2-215ENST00000484252 GSTA3Q16772 222 aa20.18■□□□□ 0.82
LIMS2-215ENST00000484252 XKR4Q5GH76 650 aa20.18■□□□□ 0.82
LIMS2-215ENST00000484252 BSPRYQ5W0U4 402 aa20.18■□□□□ 0.82
LIMS2-215ENST00000484252 C10orf107Q8IVU9 208 aa20.18■□□□□ 0.82
LIMS2-215ENST00000484252 NME8Q8N427 588 aa20.18■□□□□ 0.82
LIMS2-215ENST00000484252 B3GALNT2Q8NCR0 500 aa20.18■□□□□ 0.82
LIMS2-215ENST00000484252 KRT82Q9NSB4 513 aa20.18■□□□□ 0.82
LIMS2-215ENST00000484252 GJD2Q9UKL4 321 aa20.18■□□□□ 0.82
LIMS2-215ENST00000484252 UNCXA6NJT0 531 aa20.18■□□□□ 0.82
LIMS2-215ENST00000484252 PRKCGP05129 697 aa20.18■□□□□ 0.82
LIMS2-215ENST00000484252 C6orf222P0C671 652 aaPredicted RBP20.18■□□□□ 0.82
LIMS2-215ENST00000484252 RALBP11234 206 aa20.18■□□□□ 0.82
LIMS2-215ENST00000484252 TKTP29401 623 aaKnown RBP20.18■□□□□ 0.82
LIMS2-215ENST00000484252 SERPINB8P50452 374 aa20.18■□□□□ 0.82
LIMS2-215ENST00000484252 TMEM62Q0P6H9 643 aa20.18■□□□□ 0.82
LIMS2-215ENST00000484252 RFX8Q6ZV50 586 aa20.18■□□□□ 0.82
LIMS2-215ENST00000484252 TOP6BLQ8N6T0 577 aa20.18■□□□□ 0.82
LIMS2-215ENST00000484252 SLC2A13Q96QE2 648 aa20.18■□□□□ 0.82
LIMS2-215ENST00000484252 SLC9A7Q96T83 725 aa20.18■□□□□ 0.82
LIMS2-215ENST00000484252 SORT1Q99523 831 aa20.18■□□□□ 0.82
LIMS2-215ENST00000484252 YIPF3Q9GZM5 350 aa20.18■□□□□ 0.82
LIMS2-215ENST00000484252 NDE1Q9NXR1 346 aa20.18■□□□□ 0.82
LIMS2-215ENST00000484252 SCOCQ9UIL1 159 aa20.18■□□□□ 0.82
LIMS2-215ENST00000484252 RPS6KL1Q9Y6S9 549 aa20.18■□□□□ 0.82
LIMS2-215ENST00000484252 EEF2KO00418 725 aaKnown RBP20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms